New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | 4246038 = | 54 (0.790) | 3 (0.050) | 3/264 | NT | 5.7% | coding (382/1191 nt) | malE | maltose transporter subunit |
? | NC_000913 | 4246058 = | 47 (0.720) | coding (362/1191 nt) | malE | maltose transporter subunit |
GGTTGAACATCAGCGCGCTCTTACCTTTCGCTTTCAGTTCTTTATCCAGCGCCGGGATCTCTTCCCAGGTTTTTGGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCTTTGTCCGGGGTGATTTCAGCCAACAGGCCAGATTGAGCGTAGCCACCAAAGCGGTCGTGTGCCCAGAAGATAATGTCAGGGCCATCGCCA > NC_000913/4245891‑4246183 | gggtGAACATCAGCGCGCTCTTACCTTTCGCTTTCAGTTGTTTATCCAGCGCCGGGATCTCTTCCCAGGTTTTTGGCGGGATCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTg < 1:284148/146‑1 (MQ=255) ccacaggttgcggcaactggcgatggccctgacattatcttctgggcacacgaccgctttggtggctacgctcaatctggcctgttggctgaaatcaccccggacaaagcgttccaggacaagctgtatccgtttacctgggaTGCCGt < 1:481877‑M1/6‑1 (MQ=255) aCATCAGCGCGCTCTTACCTTTCGCTTTCAGTTCTTTATCCAGCGCCGGGATCTCTTCCCAGGTTTTTGGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTg > 1:153756/1‑149 (MQ=255) cATCAGCGCGCTCTTACCTTTCGCTTTCAGTTCTTTATCCAGCGCCGGGATCTCTTCCCAGGTTTTTGGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGt < 2:318619/149‑1 (MQ=255) cATCAGCGCGCTCTTACCTTTCGCTTTCAGTTCTTTATCCAGCGCCGGGATCTCTTCCCAGGTTTTTGGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGt > 1:1020410/1‑149 (MQ=255) cATCAGCGCGCTCTTACCTTTCGCTTTCAGTTCTTTATCCAGCGCCGGGATCTCTTCCCAGGTTTTTGGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGt > 1:552101/1‑149 (MQ=255) tCAGCGCGCTCTTACCTTTCGCTTTCAGTTCTTTATCCAGCGCCGGGATCTCTTCCCAGGTTTTTGGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGTGTAAGCAATCAGCTTGCCGTTGTaa < 2:627147/149‑1 (MQ=255) tCAGCGCGCTCTTACCTTTCGCTTTCAGTACTTTATCCAGCGCCGGGATCTCTTCCCAGGTTCTTGGCGTGTTCGGCAGCAGATCATTGTTATAAATCAGCGATAACGCTTCATCAGCGATGGGGTAAGCAATCAGCTTGCCGTTGTaa < 1:674003/149‑1 (MQ=255) tctTACCTTTCGCTTTCAGTTCTTTATCCAGCGCCGGGATCTCTAACCAGGTTTTTCGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACCGACGGCa > 1:911048/1‑149 (MQ=255) taccttCGCTTTCAGTTCTTTATCCAGCGCCGGGATCTCTTCCCAGGTTTTTGGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATccc < 1:1022467/145‑1 (MQ=255) aCCTTTCGCTTTCAGTTCTTTATCCAGCGCCGGGATCTCTTCCCAGGTTTTTGGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATccc > 2:180035/1‑149 (MQ=255) gcgatggccctgacattatcttctgggcacacgaccgctttggtggctacgctcaatctggcctgttggctgaaatcaccccggacaaagcgttccaggacaagctgtatccgtttacctgggaTGCCGTTGTAACGTACGGCATCCCa > 1:287385‑M1/125‑149 (MQ=255) cTTTCGCTTTCAGTTCTTTATCCAGCGCCGGGATCTCTTCCCAGGTTTTTGGGGGGTTCGGCAGCAGATCTTTGTTATAACTCAGCGATAACGCTTCACCAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAg > 1:127883/1‑149 (MQ=255) cTTTCGCTTTCAGTTCTTTATCCAGCGCCGGGATCTCTTCCCAGGTTTTTGGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAg < 2:1020410/149‑1 (MQ=255) cTTTCGCTTTCAGTTCTTTATCCAGCGCCGGGATCTCTTCCCAGGTTTTTGGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAg < 2:552101/149‑1 (MQ=255) ttCGCTTTCAGTTCTTTATCCAGCGCCGGGATCTCTTCCCAGGTTTTTGGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGt < 2:536394/149‑1 (MQ=255) ttCGCTTTCAGTTCTTTATCCAGCGCCGGGATCTCTTCCCAGGTTTTTGGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGt < 1:1031150/149‑1 (MQ=255) gCTTTCAGTTCTTTAACCATCCCCGGGATCTCTTCCCAGGTTTTTGGCGGGTGCGGCAGCAGCTCTTTGATATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTaaa < 2:216093/149‑1 (MQ=255) gTTCTTTATCCAGCGCCGGGATCTCTTCCCAGGTTTTTGGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATAc < 2:73708/149‑1 (MQ=255) attctcttctgcgcacacgaccgctttggtggctacgctcaatctggcctgttggctgaaatcaccccggacaaaccgttccaggacaagctgtatccgtttacctgggaTGCCGGTGTAACGTACGGCATCCCAGGTAAACGGATACa > 1:906317‑M1/111‑149 (MQ=255) ttatcttctgggcacacgaccgctttggtggctacgctcaatctggcctgttggctgaaatcaccccggacaaagcgttccaggacaagctgtatccgtttacctgggaTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAg > 2:814839‑M1/110‑149 (MQ=255) cTTTATCCAGCGCCGGGATCTCTTCCCAGGTTTTTGGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATTACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGAAACAGc > 2:806411/1‑149 (MQ=255) cTTTATCCAGCGCCGGGATCTCTTCCCAGGTTTTTGGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGc > 1:135690/1‑149 (MQ=255) cTTTATCCAGCGCCGGGATCTCTGCCCAGGTTTTTGGCGGGTTCGGCAGCAGATATTTGTTATTACTCAGCGATAACTCTTCAACAGCGCTAGGGTAAGCAATCAGCTTGCCTGTGTAACGTACGGCATCCCAGGTAAACGGATagcgc > 1:255053/1‑145 (MQ=255) tttATCCAGCGCCGGGATCTCTTCCCAGGTTTTTGGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCt > 2:1153251/1‑149 (MQ=255) ccAGCGCCGGGATCTCTTCCCAGGATTTTGGCGGGGTCGGCAGCAGATCTTTTTTATAAATCAGAGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTcc < 2:910249/149‑1 (MQ=255) cgtcGGGATCTCTGCAGAGGGTTTTGGCGGGTTCGGCAGCATATCTATGTTATAAATCAGCGATAACGCTTCAACAGCGATCTGGTAAGCAAGCAGCTTGCCGTTGTAACTTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGa < 2:801951/146‑1 (MQ=255) gcCGGGATCTCTTCCCAGGTTTTTGGCGGCTTCGGCAGCAGAACTTTGTTATAAATCAGCGATAACGCTACAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACTCCATCCCAGGTAAACAGAAACAGCTTGACATGGaa > 2:1140869/1‑149 (MQ=255) gATCTCTTCCCAGGTTTTTGGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCtt > 1:878000/1‑149 (MQ=255) gATCTCTTCCCAGGTTTTTGGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCtt < 2:1014063/149‑1 (MQ=255) aTCTCTTCCCAGGTTTTTGGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCttt > 1:553157/1‑149 (MQ=255) aTCTCTTCCCAGGTTTTTGGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCttt < 1:505103/149‑1 (MQ=255) tgccAGGTTTTTGGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATCACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCAGCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCTTTGTCCgg < 1:246763/147‑1 (MQ=255) ccAGGTTTTTGGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCTTTGTCCgggg > 2:949775/1‑149 (MQ=255) ccAGGTTTTTGGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCGTTGTCCgggg > 2:1149520/1‑149 (MQ=255) aGGTTTTTGGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCTTTGTCCGGGGTg > 2:124463/1‑149 (MQ=255) ggttttGGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCTTTGTCCGGGGTGAt < 2:121496/147‑1 (MQ=255) ttttGGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCTTTGTCCGGGGTGAttt < 1:180035/149‑1 (MQ=255) ggCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCTTTGTCGGGGGTGATTTCAGc > 1:1056507/1‑149 (MQ=255) gTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCTTTGTCCGGGGTGATTTCAGCCAACa < 2:3940/149‑1 (MQ=255) tCGGCAGAAGATCTTTGTTATAAATCACGTATAACGCTTCATCACCGATCGGGTAAGCAATCAGCTTGACGTTGTAACGTACGGCATCCCTGGTAAACGGATACAGCTTGTCCTGGAACGCTTTGTCCGGGGTGTTTTCAGCCAACAgg < 2:63612/149‑1 (MQ=255) gcagcaGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCTTTGTCCGGGGTGATTTCAGCCAACAGGCCa < 2:153756/149‑1 (MQ=255) cagATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCTTTGTCCGGGGTGATTTCAGCCAACAGGCCAGAtt > 1:157203/1‑149 (MQ=255) gATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCTTTGTCCGGGGTGATTTCAGCCAACAGGCCAGATTGa > 2:962946/1‑149 (MQ=255) aTCTTTGTTATAAATCAGCGATAACGCTTCTACTCCGATCGGGTAAGCAAGCAGCTTGCCGGTGTTACGTACGGCATCCCAGGTCAACGGATACAACTTGTCCTGGCACGCTTGGTCCGGGGAGATTTCAGCCAACAGCCCAGATTGAg < 1:233883/149‑1 (MQ=255) gTTAAAAATCACCGATAACGCTGCCACAGCCATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCCTCCCAGGTATACGGCTACCGCTTGGCCTGGAACGATATGTCCGGGGTCATATCAGCCTACAGGCCAGATTGAGCGTAGc > 2:702385/1‑149 (MQ=255) ataAATCAGCGATAACGCTTCACCAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCTTTGTCCGGGGTGATTTCAGCCAACAGGCCAGATTGAGCGTAGccac > 2:521920/1‑149 (MQ=255) ataAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCTTTGTCCGGGGTGATTTCAGCCAACAGGCCAGATTGAGCGTAGccac > 2:972014/1‑149 (MQ=255) ataAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCTTTGTCCGGGGTGATTTCAGCCAACAGGCCAGATTGAGCGTAGccac > 2:535250/1‑149 (MQ=255) aTCAGCGAAAACGCTTCAACGGCGAGCGGGTAAGCAATCACCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGTATACAGCTTGTCCTGGTAAGCTTTTTCCGGGGTGTTTTCAGCCAACAGGCCAGATTGAGCGTAGCCACCaaa < 1:910454/149‑1 (MQ=255) tCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCTTTGTCCGGGGTGATTTCAGCCAACAGGCCAGATTGAGCGTAGCCACCAAAg > 1:976965/1‑149 (MQ=255) tCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCTTTGTCCGGGGTGATTTCAGCCAACAGGCCAGATTGAGCGTAGCCACCAAAg > 1:10516/1‑149 (MQ=255) cTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCTTTGTCCGGGGTGATTTCAGCCAACAGGCCAGATTGAGCGTAGCCACCAAAGCGGTCGTGTGcc < 2:135690/149‑1 (MQ=255) tCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCTTTGTCCGGGGTGATTTCAGCCAACAGGCCAGATTGAGCGTAGCCACCAAAGCGGTCGTGTGCCCa < 1:1067596/149‑1 (MQ=255) cAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCTTTGTCCGGGGTGATTTCAGCCAACAGGCCAGATTGAGCGTAGCCACCAAAGCGGTCGTGTGCCCag > 1:630513/1‑149 (MQ=255) aCAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCTTTGTCCGGGGTGATTTCAGCCAACAGGCCAGATTGAGCGTAGCCACCAAAGCGGTCGTGTGCCCagaa > 2:481877/1‑149 (MQ=255) aCAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCTTTGTCCGGCGTGATTTCAGCAAACAGGCCAGATTGAGCGTAGCCAACAAAGCGGTCGTGTGCCCagaa > 1:292433/1‑149 (MQ=255) tAAGCAATCAGCTTGCCGTTTTATCGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCTTTGTCCGGGGTGATTTCAGGCAACAGGCCAGATTGAGCGTAGCCACCAAAGCGGTCGTGTGCCCAGAAGATAATGTCAgg < 1:806411/149‑1 (MQ=255) tAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCTTTGTCCGGTGTGATTTCAGCCAACAGGCCAGATTGAGCGTAGCCACCAAAGCGGTCGTGTGCCCAGAAGATAATGTCAgg < 1:1153251/149‑1 (MQ=255) gcgTGCCGTTGTAACGTACGGCAGCCCAGGTAATCGCCTCCAGGTTGGCCTGGAACGCAGTGGCCGGGGTGATGTCAGCCAACAGGCCAGCTTGAGCGTAGCCACCAAAGCGGTCGTGTGCCCAGAAGATAATGTCAGGGCCATCGCCa > 1:641384‑M1/4‑149 (MQ=255) | GGTTGAACATCAGCGCGCTCTTACCTTTCGCTTTCAGTTCTTTATCCAGCGCCGGGATCTCTTCCCAGGTTTTTGGCGGGTTCGGCAGCAGATCTTTGTTATAAATCAGCGATAACGCTTCAACAGCGATCGGGTAAGCAATCAGCTTGCCGTTGTAACGTACGGCATCCCAGGTAAACGGATACAGCTTGTCCTGGAACGCTTTGTCCGGGGTGATTTCAGCCAACAGGCCAGATTGAGCGTAGCCACCAAAGCGGTCGTGTGCCCAGAAGATAATGTCAGGGCCATCGCCA > NC_000913/4245891‑4246183 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |