New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 272886 =73 (1.070)4 (0.060) 4/266 NT 5.1% pseudogene (40/1108 nt) ykfC CP4‑6 prophage; conserved protein;Phage or Prophage Related
?NC_000913 272926 = 79 (1.200)pseudogene (80/1108 nt) ykfC CP4‑6 prophage; conserved protein;Phage or Prophage Related

ACATGGCGAAGGGAAGCAGTTTGAATGTGTTTGCGACGTGAATTAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTGGCTGTTGAGCTGCAAATCCTCAGGGATGAA  >  NC_000913/272778‑273071
                                                                                                                                                    |                                                                                                                                                 
cctgtagcattgttttgttcacgccatcaacgccgggggtatgggccccctttgatgaaagcgtgatccgcgccgcttcagccagccattctggttgtgttatcagacGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCg                                                                                                                                                   >  2:727345‑M1/109‑149 (MQ=255)
 ctgtagcattgttttgtgcacgccagccccgccgggggtatgggcccccgttgatgacagcgtgatccgcgccgcttcagccagccattctggttgtgttatcagacGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGt                                                                                                                                                  >  1:666483‑M1/108‑149 (MQ=255)
 cATGGCGAAGGGAAGCAGTTTGAATGTGTTTGCGACGTGAATTAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCCCATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCgg                                                                                                                                                  >  1:1139697/1‑148 (MQ=255)
  aTGGCGAAGGGAAGCAGTTTGAATGTGTTTGCGACGTGAATTAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTc                                                                                                                                                 <  1:726317/149‑1 (MQ=255)
      cGAAGGGAAGCAGTTTGAATGTGTTTGCGACGTGAATTAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGAt                                                                                                                                             <  1:1164975/149‑1 (MQ=255)
         aGGGAAGCAGTTTGAATGTGTTTGCGACGTGAATTAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAac                                                                                                                                          <  1:471480/149‑1 (MQ=255)
           ggAAGCAGTTTGAATGTGTTTGCGACGTGAATTAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAacac                                                                                                                                        <  1:1148091/149‑1 (MQ=255)
            gAAGCAGTTTGAATGTGTTTGCGACGTGAATTAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAAcaca                                                                                                                                       >  2:1038563/1‑149 (MQ=255)
             aaGCAGTTTGAATGTGTTTGCGACGTGAATTAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACaa                                                                                                                                      <  1:1012686/149‑1 (MQ=255)
             aaGCAGTTTGAATGTGTTTGCGACGTGAATTAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCAACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACaa                                                                                                                                      >  2:453380/1‑149 (MQ=255)
               gCAGTTTGAATGTGTTTGCGACGTGAATTAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATTACACAAcc                                                                                                                                    >  2:897568/1‑149 (MQ=255)
               gCAGTTTGAATGTGTTTGCGACGTGAATTAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAAcc                                                                                                                                    >  1:797244/1‑149 (MQ=255)
                   tttGAATGTGTTTGCGACGTGAATTAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACACCCAGaa                                                                                                                                >  1:406153/1‑149 (MQ=255)
                   tttGAATGTGTTTGCGACGTGAATTAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGaa                                                                                                                                >  2:1118284/1‑149 (MQ=255)
                   tttGAATGTGTTTGCGACGTGAATTAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGaa                                                                                                                                >  2:186645/1‑149 (MQ=255)
                   tttGAATGTGTTTGCGACGTGAATTAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGaa                                                                                                                                >  1:586260/1‑149 (MQ=255)
                   tttGAATGTGTTTGCGACGTGAATTAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATCGGCAGCCACCCATCCGTCCTACGGATTCCACGGCTGCTGCGTCTGATAACACAACCAGAAt                                                                                                                               >  1:232840/1‑149 (MQ=255)
                     tGAATGTGTTTGCGACGTGAATTAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAAtg                                                                                                                              >  2:58610/1‑149 (MQ=255)
                      gAATGTGTTTGCGACGTGAATTAACTGACCTAACGATGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAAtgg                                                                                                                             <  1:1097561/149‑1 (MQ=255)
                       aaTGTGTTTGCGACGTGAATTAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAAtggc                                                                                                                            <  1:888366/149‑1 (MQ=255)
                        aTGTGTTTGCGACGTGAATTAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAAtggct                                                                                                                           <  1:85510/149‑1 (MQ=255)
                          gtgtTTGCGACGTGAATTAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAAtggctgg                                                                                                                         <  1:727014/149‑1 (MQ=255)
                           tgtTTGCGACGTGAATTAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAAtggcgggc                                                                                                                        >  2:263254/1‑149 (MQ=255)
                            gtTTGCGACGTGAATTAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGCATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATggctggct                                                                                                                       >  1:94695/1‑149 (MQ=255)
                                gCGACGTGAATTAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAg                                                                                                                   >  2:1052445/1‑149 (MQ=255)
                                   aCGTGAATTAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAgcgg                                                                                                                >  1:947649/1‑149 (MQ=255)
                                   aCGGGAATAAACTGAGCTAACCAGGGGACGACCTTTGATACACCGCCAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTAAGGATTCAACGGCTGCTGCGTCTGATAACACAACAAGAATGGCGGGCTGAAgggg                                                                                                                <  2:813172/149‑1 (MQ=255)
                                     gTGAATTAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAgcggcg                                                                                                              >  1:514329/1‑149 (MQ=255)
                                        aaTTACCTGACCTAACGAGGTGAAGCCCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCgg                                                                                                           >  1:875640/1‑149 (MQ=255)
                                        aaTTAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCgg                                                                                                           >  2:854157/1‑149 (MQ=255)
                                         aTTAACTGACCTAACGAGGTGAAGACCTTTGATAAGCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGTCTGCTGCGTCTGATAACCCAACCAGAATGGCTGGCTGAAGCGGCGCGGa                                                                                                          >  1:648091/1‑149 (MQ=255)
                                          ttAACTGACCTAACGAGGTGCAGACCTTAGATAAACAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTTCGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGAt                                                                                                         <  1:206917/149‑1 (MQ=255)
                                          ttAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGAt                                                                                                         >  2:157673/1‑149 (MQ=255)
                                             aCTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGCTCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGAGAACACAACCAGAATCGCTGGCTGAAGCGGCGCGGATCAc                                                                                                      >  1:12294/1‑149 (MQ=255)
                                              cTGACCTAACGAGGTGAAGACCTGTGAGAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGCTCCGTCCCTACGGATTCAACGGCGGCTGCGTCTGATAACCCGCCCAGCATGGCGGGCTGCAGCGGCGCGGATCACg                                                                                                     >  2:1074980/1‑149 (MQ=255)
                                                gACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCt                                                                                                   <  2:623768/149‑1 (MQ=255)
                                                     aaCGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTtcat                                                                                              >  2:464866/1‑149 (MQ=255)
                                                     aaCGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACAGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTtcat                                                                                              >  1:923008/1‑149 (MQ=255)
                                                      aCGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTtcatc                                                                                             >  2:589952/1‑149 (MQ=255)
                                                      aCGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTtcatc                                                                                             >  2:356306/1‑149 (MQ=255)
                                                      aCGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCCGATAACACAACCAGAATGGCTGGCTGCAGCGGCGCGGATCACGCTTtcatc                                                                                             >  2:58274/1‑149 (MQ=255)
                                                      aCGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGGCTGATAACACAACCAGAATGGCTGGCTGAAGAGGCGCGGATCACGCTTtcatc                                                                                             >  1:702295/1‑149 (MQ=255)
                                                        gAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAATCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTCCTGCGACTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCaa                                                                                           >  1:582644/1‑149 (MQ=255)
                                                               aGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGc                                                                                    <  1:933067/149‑1 (MQ=255)
                                                               aGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGc                                                                                    <  2:94695/149‑1 (MQ=255)
                                                                 aCCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGccc                                                                                  <  1:1016378/149‑1 (MQ=255)
                                                                     ttGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTCCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATAc                                                                              >  1:488177/1‑149 (MQ=255)
                                                                           aTCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCgg                                                                        <  1:815799/149‑1 (MQ=255)
                                                                              aGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGt                                                                     >  2:427668/1‑149 (MQ=255)
                                                                              aGCGAAATGCAACGCAAGCTTCCCACATGGGCAGCAACCGATCCGTCCCTACGGATTCAACCGCTGCTGATTATGAAAACACAACCAGAATGGCAGGCGGAATCGGCGAGGATCACAATGTCATAAAAGGGGGACCTTAACCACGGCGt                                                                     >  2:803698/1‑149 (MQ=255)
                                                                                cGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTg                                                                   <  1:636871/149‑1 (MQ=255)
                                                                                 gAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACGAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAACGGGGGCCCCTACCCCCGGCGTGGa                                                                  >  1:141784/1‑149 (MQ=255)
                                                                                  aaaTGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGAt                                                                 <  1:1081743/149‑1 (MQ=255)
                                                                                    aTGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATgg                                                               >  2:83747/1‑149 (MQ=255)
                                                                                     tGCAACGCAAGCTTGCCACATGGGCAGCCACCGCTCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGc                                                              <  1:709408/149‑1 (MQ=255)
                                                                                     ggCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTCCGGATTCAACGGCGGCGGCGTCTGATAACACAACCAGAATGGCGGGCTGAAGCGGCGCGGAGCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGc                                                              <  2:656111/148‑1 (MQ=255)
                                                                                          cGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGaa                                                         >  1:864358/1‑149 (MQ=255)
                                                                                               gCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGaacaaaa                                                    <  2:289478/149‑1 (MQ=255)
                                                                                               gCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGATGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGaacaaaa                                                    <  2:225704/149‑1 (MQ=255)
                                                                                                    ccACATGGGCAGCCACCGATCCGTCCCTACGGATTCATCGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCTCGCTTTAATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATg                                               >  2:697304/1‑149 (MQ=255)
                                                                                                    ccACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCGGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGACCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATg                                               <  1:830788/149‑1 (MQ=255)
                                                                                                     cacaTGGGCAGCCACCGCTCCGTCCCTACGGATTCCACGGCTGCGGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCACAGGGGGCCCATACCCCCGGCGTGGATGGCGTGACCAAAACAATGc                                              >  1:777591/1‑149 (MQ=255)
                                                                                                        aTGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTAc                                           >  2:337561/1‑149 (MQ=255)
                                                                                                        aTGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTAc                                           <  1:277635/149‑1 (MQ=255)
                                                                                                          gggCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACCACCAGAATGGCTGGCTGACGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAg                                         <  2:791891/149‑1 (MQ=255)
                                                                                                          acgcagcagccgttgaatccgtagggacggatcggtggctgcGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTGTCATCAACGGGGGCCCATACCCCCGGCGGGGCTGGCGTGCACAAAACAATGCTACAg                                         >  1:666483‑M2/43‑149 (MQ=255)
                                                                                                           cgcagcagccgttgaatccgtagggacggatcggtggctgcGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAgg                                        >  2:727345‑M2/42‑149 (MQ=255)
                                                                                                             CAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGcc                                      <  1:714693‑M1/149‑1 (MQ=255)
                                                                                                              AGCCACCGATCCGGCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTTGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCa                                     >  1:231171‑M1/1‑149 (MQ=255)
                                                                                                                 agccgttgaatccgtagggacggatcggtggctgcGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGAc                                  >  1:515226‑M2/36‑149 (MQ=255)
                                                                                                                   ccGATCCGGCCCTACGGATTCAACGGCTGCTGCGTCTTATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCCAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTg                                <  1:151439/149‑1 (MQ=255)
                                                                                                                    cGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTgg                               <  2:586260/149‑1 (MQ=255)
                                                                                                                       tCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACTACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTGGCTg                            <  1:61496/149‑1 (MQ=255)
                                                                                                                       cccGGCCCTACGGATTCAACGGCTGCTGCGGCTGCTAACACATCCAGAATGGCTGGCGGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGTCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTGGCTg                            <  1:968028/148‑1 (MQ=255)
                                                                                                                        ccGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCAGGCAGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTGGCTGt                           <  2:457370/149‑1 (MQ=255)
                                                                                                                           tCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTGGCTGTTGa                        <  1:1038563/149‑1 (MQ=255)
                                                                                                                            tccTACGGATTCATCGGCTGCGGCGGCTGATAACAGAACCAGACTCGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTGGCTGTTGAg                       <  2:232840/148‑1 (MQ=255)
                                                                                                                            ccgtagggacggatcggtggctgcGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTGGCTGTTGAg                       <  2:515226‑M2/125‑1 (MQ=255)
                                                                                                                            cccTACGTATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTGGCTGTTGAg                       <  2:680029/149‑1 (MQ=255)
                                                                                                                            cccTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGACTGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTGGCTGTTGAg                       <  1:687197/149‑1 (MQ=255)
                                                                                                                            cccTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTGGCTGTTGAg                       <  2:278236/149‑1 (MQ=255)
                                                                                                                             ccTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTGGCTGTTGAGc                      <  1:186645/149‑1 (MQ=255)
                                                                                                                              cTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTGGCTGTTGAGCt                     >  2:141559/1‑149 (MQ=255)
                                                                                                                                   gATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCGGGCTGAAGCGGCGCGGATCACGATTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTGGCTGTTGAGCTGCaaa                <  1:263254/149‑1 (MQ=255)
                                                                                                                                     ttCAACGGCTGCGGCGTCTGATAACACAACCAGACGGGCTGGCTGAAGCGGCGCGGATCACGCAAGCATCAAAGGGCGCCCCTACACCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTGGCTGGTGAGCTGCAAATc              <  1:696052/149‑1 (MQ=255)
                                                                                                                                        aaCGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTGGCTGTTGCGCTGCAAATCCTc           >  2:133902/1‑149 (MQ=255)
                                                                                                                                         aCGGCTGCTGCGTCTGATAACACACCCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACCGGCCAGACTGGCTGTTGAGCTGCAAATCCTCa          >  2:280134/1‑149 (MQ=255)
                                                                                                                                         aCGGCTGCTGCGTCTGATAACACAACCAGCATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCGGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTGGCTGTTGAGCTGCAAATCCTCa          >  2:979597/1‑149 (MQ=255)
                                                                                                                                         aCGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTGGCTGTTGCGCTGCAAATCCTCa          >  2:384766/1‑149 (MQ=255)
                                                                                                                                          cGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCAGCAAAGGGGGCACATACCCCCGGCGGTGATGGCGTGAACAATCCAATGCTACAGGCCAGACTGGCTGTTGCGCTGCAAATCCTCAg         >  1:900227/1‑149 (MQ=255)
                                                                                                                                           ggCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAACGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTGGCTGTTGAGCTGCAAATCCTCAgg        >  2:1085360/1‑149 (MQ=255)
                                                                                                                                           ggCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTGGCGGTTGAGCTGCAAATCCTCAgg        <  1:453380/149‑1 (MQ=255)
                                                                                                                                             cggctgcGTCTGTTAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTGGCTGTTGAGCTGCAAATCCTCAGGGa      <  1:570979‑M2/142‑1 (MQ=255)
                                                                                                                                               gctgcGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTGGCTGTTGAGCTGCAAATCCTCAGGGATg    >  2:1015547‑M2/6‑149 (MQ=255)
                                                                                                                                               gctgcGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCAACAAAGGGGGCCCATACCCCCGGCGTTGCGGGCGTGAACAAACCAATGCTACCGGCCAGACTGGCTGTTGAGGTGCAAATCCTCAGGGatt    >  1:652110‑M2/6‑148 (MQ=255)
                                                                                                                                                 tgcGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAATGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTGGCTGTTGAGCTGCAAATCCTCAGGGATGaa  <  1:58610‑M2/146‑1 (MQ=255)
                                                                                                                                                 tgcGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGCCTGGCTGTTGAGCTGCAAATCCGCAGGGATGaa  >  2:43808‑M2/4‑149 (MQ=255)
                                                                                                                                                 tgcGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTGGCTGTTGAGCTGCAAATCCTCAGGGATGaa  <  2:864358‑M2/146‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                 
ACATGGCGAAGGGAAGCAGTTTGAATGTGTTTGCGACGTGAATTAACTGACCTAACGAGGTGAAGACCTTTGATAATCAGCGAAATGCAACGCAAGCTTGCCACATGGGCAGCCACCGATCCGTCCCTACGGATTCAACGGCTGCTGCGTCTGATAACACAACCAGAATGGCTGGCTGAAGCGGCGCGGATCACGCTTTCATCAAAGGGGGCCCATACCCCCGGCGTTGATGGCGTGAACAAAACAATGCTACAGGCCAGACTGGCTGTTGAGCTGCAAATCCTCAGGGATGAA  >  NC_000913/272778‑273071

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.