Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 3,890,075 IS5 (–) +4 bp 100% coding (1346‑1349/1416 nt) tnaA → tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 2290113NA (NA)104 (1.520) 81/276 NT 100% noncoding (1/1195 nt) IS5 repeat region
?NC_000913 3890075 = 0 (0.000)coding (1346/1416 nt) tnaA tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent
* ? NC_000913 3652036 =NA (NA)125 (1.830) 89/276 NT 100% noncoding (1195/1195 nt) IS5 repeat region
?NC_000913 = 3890078 0 (0.000)coding (1349/1416 nt) tnaA tryptophanase/L‑cysteine desulfhydrase, PLP‑dependent

Only 100 of 258 total aligned reads displayed.

CTGTTAGGCCGCGATCCGAAAACCGGTAAACAACTGCCATGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCT  >  NC_000913/3889927‑3890223
                                                                                                                                                    |                                                                                                                                                    
cgggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcct                                                                                                                                                      <  1:618160‑M2/1‑1 (MQ=255)
 gggacaagaaagtctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctcaagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt                                                                                                                                                     >  2:545534‑M2/148‑149 (MQ=255)
 gggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt                                                                                                                                                     <  2:603046‑M2/2‑1 (MQ=255)
 gggacaagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttcctt                                                                                                                                                     <  1:115712‑M2/2‑1 (MQ=255)
  ggacaagaaaatctcttttcttgtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTa                                                                                                                                                    <  1:754075‑M2/3‑1 (MQ=255)
  gTTAGGCCGCGATCCGAAAACCGGTAAACAACTGCCATGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAACCATGTGAAAGAGAACGCGGCGAATATTa                                                                                                                                                    >  2:372704/1‑149 (MQ=255)
   ttAGGCCGCGATCCGAAAACCGGTAAACAACTGCCATGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTaa                                                                                                                                                   <  1:295123/149‑1 (MQ=255)
   ttAGGCCGCGATCCGAAAACCGGTAAACAACTGCCATGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTaa                                                                                                                                                   <  1:118386/149‑1 (MQ=255)
     aGGCCGCGATCCGAAAACCGGTAAACAACTGCCATGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAgg                                                                                                                                                 >  2:331689‑M2/1‑147 (MQ=255)
      aagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctacagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAgg                                                                                                                                                >  1:875888‑M2/143‑149 (MQ=255)
        gaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccttaaaccca                                                                                                                                              >  1:148105‑M2/141‑145 (MQ=255)
          gcgATCCGAAAACCGGTAAACAACTGCCATGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTTAggaaggt                                                                                                                                            <  1:662438‑M2/149‑8 (MQ=255)
          gcgATCCGAAAACCGGTAAACAACTGCCATGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggt                                                                                                                                            >  2:167119‑M2/1‑142 (MQ=255)
             tctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAAcc                                                                                                                                         <  1:480132‑M2/14‑1 (MQ=255)
             aTCCGAAAACCGGTAAACAACTGCCATGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgct                                                                                                                                         <  2:707560‑M2/149‑11 (MQ=255)
              tCCGAAAACCGGTAAACAACTGCCATGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGCACGCGGCGAATATTAAggaaggtgcta                                                                                                                                        <  2:1119836‑M2/149‑12 (MQ=255)
                   aaaCCGGTAAACAACTGCCATGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGAGAATATTAAggaaggtgagaattag                                                                                                                                   <  2:656870‑M2/149‑17 (MQ=255)
                     aCCGGTAAACAACTGCCATGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcg                                                                                                                                 >  2:46896‑M2/1‑131 (MQ=255)
                        gtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcaagatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggccttgttcgaaccttcaTTAAAGAATTAACCTTTACGTACGa                                                                                                                              >  1:652272‑M2/125‑149 (MQ=255)
                        ggTAAACAACTGCCATGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcgggg                                                                                                                              >  1:911338‑M2/1‑128 (MQ=255)
                                 cgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGt                                                                                                                     >  2:336228‑M2/116‑149 (MQ=255)
                                  tGCCATGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACCCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttct                                                                                                                    <  2:484645‑M2/149‑32 (MQ=255)
                                   gCCATGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctc                                                                                                                   <  2:446964‑M2/149‑33 (MQ=255)
                                       tGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGTATTCATTATTGTAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggct                                                                                                               >  1:789012‑M2/1‑113 (MQ=255)
                                       tGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGATGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggct                                                                                                               <  2:182110‑M2/149‑37 (MQ=255)
                                         cccGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATCTACTCAAACACATATGGACTTCATAATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctga                                                                                                             >  1:805312‑M2/1‑111 (MQ=255)
                                         cccGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctga                                                                                                             <  1:810350‑M2/149‑39 (MQ=255)
                                          ctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCa                                                                                                            >  2:302960‑M2/107‑149 (MQ=255)
                                             gCTGAAATGCTTCGTTTAACCAATCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCTGCGAATATTAAggaaggttcgaataagcggggaaattcttctcggctgactca                                                                                                         >  1:1031473‑M2/1‑107 (MQ=255)
                                              cTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcag                                                                                                        >  1:707560‑M2/1‑106 (MQ=255)
                                                gAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtc                                                                                                      <  1:16657‑M2/149‑46 (MQ=255)
                                                     gctgcGGTTAACCATGCCGCGCGCACCATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgattaagcggggaaattcttctcggctgactcagtcatttc                                                                                                 >  2:229651‑M2/1‑99 (MQ=255)
                                                       cggcgaaggtaagttgatgactcatgttgatccctgtactagggctccagatgacaaacatgagctcttacgagtgacttggtcgcaccttcgTTAAATGAGTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCAGCGCaaaa                                                                                               <  2:832793‑M2/56‑1 (MQ=255)
                                                         cGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtaatttaattt                                                                                             <  1:773059‑M2/149‑55 (MQ=255)
                                                           tttAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttct                                                                                           <  1:40780‑M2/149‑57 (MQ=255)
                                                           gaaggtaagttgatgcctcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTa                                                                                           >  1:217841‑M2/90‑149 (MQ=255)
                                                              ggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAaag                                                                                        >  2:490547‑M2/87‑149 (MQ=255)
                                                                 cATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAATAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgt                                                                                     >  2:132692‑M2/1‑87 (MQ=255)
                                                                 cATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgt                                                                                     >  1:58747‑M2/1‑87 (MQ=255)
                                                                   ttCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgttt                                                                                   >  2:1027143‑M2/1‑85 (MQ=255)
                                                                   gttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGtt                                                                                   <  1:1053788‑M2/68‑1 (MQ=255)
                                                                       atgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTttaat                                                                               <  1:842851‑M2/72‑1 (MQ=255)
                                                                         gcggAACATATACTCAACCACATATGGAATTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCTAATATTAAggaaggtgcgaatatgcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccg                                                                             >  1:526446‑M2/1‑79 (MQ=255)
                                                                          cgcAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccga                                                                            >  2:759797‑M2/1‑78 (MQ=255)
                                                                              atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCCCCGCAAAACTTAAAGAAGTTTAATTAAtact                                                                        >  2:256441‑M2/71‑149 (MQ=255)
                                                                              atgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAAtact                                                                        >  2:1081102‑M2/71‑149 (MQ=255)
                                                                               tgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAAtacta                                                                       >  2:907284‑M2/70‑149 (MQ=255)
                                                                               tgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAAACGAAAGTATTGCGTCACTTCACCGCAAAAGTTAAAGAAGTTTAATTAAtacta                                                                       >  2:215064‑M2/70‑149 (MQ=255)
                                                                               aatataCTCAAACACATATGGACTTCATTATTGAAGCCTTTATACATGTGAAAGAGAAAGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttt                                                                       >  1:196890‑M2/2‑73 (MQ=255)
                                                                                atatACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttt                                                                      >  2:745670‑M2/1‑72 (MQ=255)
                                                                                atatACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatggttgagccgatttttt                                                                      <  2:637291‑M2/149‑78 (MQ=255)
                                                                                    aCTCAAACACATATGGACTTCATTTGTGAAGCCTTGAAACATGTGAACGATAACGCTGCGAATATTAAggaaggtgcgaaaaagctgggaaattcttctcggctgactcagtcatttcatttcttcatgttttagacgattttttctcc                                                                  >  2:773368‑M2/1‑68 (MQ=255)
                                                                                     cTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGCACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctccc                                                                 <  2:1091756‑M2/149‑83 (MQ=255)
                                                                                     cTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctccc                                                                 >  1:185594‑M2/1‑67 (MQ=255)
                                                                                     accctgttctatggctccagatgacaaacatgatctcatctcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGt                                                                 <  1:1125593‑M2/86‑1 (MQ=255)
                                                                                      cccagatctatgcctccagatgacaaacatgatctcatatcagggacttgttcgaaccttccTTAAAGGATTACCCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTg                                                                <  2:1100811‑M2/87‑1 (MQ=255)
                                                                                       cctcttctagggctccagatgacaaacatgatctcatatcagcgacttgtacgcaccttccTTAAAGGATTAAAATTTACGTACGAACCGAAAGTATTGCGACACTGCACCCCAAAACTTAAAGAAGTTTAATTAATACTACAGAGAgg                                                               >  2:580181‑M2/62‑149 (MQ=255)
                                                                                        aaaCACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCTGCGAAGATTAAggacggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgatcagcatttttctcccgta                                                              <  2:1046054‑M2/149‑86 (MQ=255)
                                                                                        aaaCACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgta                                                              >  2:810350‑M2/1‑64 (MQ=255)
                                                                                            acaTATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGATAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaagtattctcggctgactcagtcatttcatttcttcatgattgagccgattttttctacagtaaatg                                                          <  2:1177053‑M2/149‑90 (MQ=255)
                                                                                             ctatggctccagatgacaaacatgatcgcctatcagggcgttgttcgaacctgccTTAAAGGATTAACCTTTACGTACGAACCGAAAGGATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATaa                                                         <  1:1083736‑M2/94‑1 (MQ=255)
                                                                                              tatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTAAAAg                                                        <  2:696038‑M2/95‑1 (MQ=255)
                                                                                               atggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAgg                                                       <  1:933962‑M2/96‑1 (MQ=255)
                                                                                                 tGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCTGCGAATATTAAggaaggtgcgaataagcgtggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttt                                                     <  1:85703‑M2/149‑95 (MQ=255)
                                                                                                  ggACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttt                                                                      >  1:350792‑M2/1‑54 (MQ=255)
                                                                                                  gctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACAACAGAGTGGCTATAAGGATg                                                    >  1:987347‑M2/51‑149 (MQ=255)
                                                                                                   gACTTCATTATTGAAACCTTTAAACATGTGACAGAGAACGCGGCGAATATTAAggaaggtgcgtataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaa                                                   >  2:1149458‑M2/1‑53 (MQ=255)
                                                                                                     cTTCATTATTGAAGCCATTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgattaagcggggaaattcttctcggatgactcagtcatttcatttcttcatctattagccgattttttatcacgtaaatgccttgaatc                                                 <  2:1035505‑M2/149‑99 (MQ=255)
                                                                                                       tCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgcttttttctcccgtaaatgacttgaatgag                                               <  1:1168256‑M2/149‑101 (MQ=255)
                                                                                                       agatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGc                                               <  2:620843‑M2/104‑1 (MQ=255)
                                                                                                        aattattgAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagc                                              >  1:975825‑M2/2‑48 (MQ=255)
                                                                                                         attattGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgcctcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcc                                             <  2:95851‑M2/149‑103 (MQ=255)
                                                                                                         attattGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcc                                             <  1:595613‑M2/149‑103 (MQ=255)
                                                                                                          ttattGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcct                                            <  1:955433‑M2/149‑104 (MQ=255)
                                                                                                          tgacaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCAc                                            >  2:715984‑M2/43‑149 (MQ=255)
                                                                                                            acaaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCActc                                          >  2:244637‑M2/41‑149 (MQ=255)
                                                                                                             caaacatgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCActct                                         >  2:729973‑M2/40‑149 (MQ=255)
                                                                                                              aaacatgatctcatatcaggtacttgttcgcacattccTTAAAGGATTAACCTTTACGTACGAACAGAAAGTATTGCGTCACTTCAACGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTATCCActctc                                        >  1:262235‑M2/39‑149 (MQ=255)
                                                                                                                acatgatctcatatcagggacttgttctcaccttacTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCtt                                      <  2:143168‑M2/113‑1 (MQ=255)
                                                                                                                aaGCCTTTAAAGATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaaaaagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttag                                      >  1:1014126‑M2/1‑40 (MQ=255)
                                                                                                                 catgatctcatatcagggacttgttcgcaccatccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATACCGTCACTTCAAAGCAAAACTTAAAGAAGTTAAATTAATACAACACAGTGGCTATAAGGAAGTTAGCCACTCTCTTa                                     >  1:506234‑M2/36‑149 (MQ=255)
                                                                                                                 aGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttaga                                     >  1:694205‑M2/1‑39 (MQ=255)
                                                                                                                  atgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACATAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTAc                                    <  1:812648‑M2/115‑1 (MQ=255)
                                                                                                                   tgatctcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCttatc                                   <  1:490298‑M2/116‑3 (MQ=255)
                                                                                                                       tAAACATGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgttt                               <  1:738464‑M2/149‑117 (MQ=255)
                                                                                                                        tcatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACa                              >  2:320066‑M2/29‑149 (MQ=255)
                                                                                                                         aatatcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACAt                             <  2:921086‑M2/122‑1 (MQ=255)
                                                                                                                           cATGTGAATGTGTACGGGGCGAATATTAAggaaggtgcgaataagcgggttaattcttctcggctgactcagtcatttcatttcttcatgttttagccgattttttctcccgtaaatgcattgaatcagcctatttagaccgtttcttc                           >  1:576640‑M2/1‑29 (MQ=255)
                                                                                                                            atcagggacttgttcgcaccttccTTAAAGGAATAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCt                          <  1:1158714‑M2/125‑1 (MQ=255)
                                                                                                                            aTGTGAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgagtcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcg                          >  2:554760‑M2/1‑28 (MQ=255)
                                                                                                                             tcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTTAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTc                         >  2:864676‑M2/24‑149 (MQ=255)
                                                                                                                             tcagggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTc                         <  1:437999‑M2/126‑1 (MQ=255)
                                                                                                                               tgAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgcca                       <  2:366460‑M2/149‑125 (MQ=255)
                                                                                                                                gggacttgttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAAt                      <  2:394020‑M2/129‑1 (MQ=255)
                                                                                                                                gAAAGCGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtgatttcatttcttaatgtttgagccgattttttctcccttaaatgacttgattcagcctatttagaccgtttcttagccat                      <  1:1104963‑M2/149‑126 (MQ=255)
                                                                                                                                gAAAGAGAACGCGGCGAATATTAAggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccat                      <  1:306778‑M2/149‑126 (MQ=255)
                                                                                                                                        ttcgcaccttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCCCTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCATACATCCTCAATAACaaaaa              >  1:60299‑M2/13‑149 (MQ=255)
                                                                                                                                         tcgcaccttccTTAAAGGATTAACCTTTACGTACGAACAGAAAGTATTTCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAAt             <  1:230520‑M2/138‑1 (MQ=255)
                                                                                                                                             accttccTTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAgca         >  1:381143‑M2/8‑148 (MQ=255)
                                                                                                                                                    ttAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCctct  >  1:106904/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CTGTTAGGCCGCGATCCGAAAACCGGTAAACAACTGCCATGCCCGGCTGAACTGCTGCGTTTAACCATTCCGCGCGCAACATATACTCAAACACATATGGACTTCATTATTGAAGCCTTTAAACATGTGAAAGAGAACGCGGCGAATATTAAAGGATTAACCTTTACGTACGAACCGAAAGTATTGCGTCACTTCACCGCAAAACTTAAAGAAGTTTAATTAATACTACAGAGTGGCTATAAGGATGTTAGCCACTCTCTTACCCTACATCCTCAATAACAAAAATAGCCTTCCTCT  >  NC_000913/3889927‑3890223

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.