| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,781,101 | A→C | 13.7% | intergenic (+84/‑114) | lldD → / → trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,781,101 | 0 | A | C | 13.7% | 170.0 / 4.1 | 108 | intergenic (+84/‑114) | lldD/trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base A (43/46); new base C (10/7); total (55/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.98e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 111 total aligned reads displayed.
TGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATT > NC_000913/3780953‑3781247 | tGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGa < 1:874858/149‑1 (MQ=255) cAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTGACCCTAAACCTCTCCCTCACGGTGAGGGGGCCGTTCGGCGGGGTATGTTCGCCCTCACTATGAAACGaca > 1:596079/1‑149 (MQ=255) cAGGGGCTGGGTAAAGAGTCGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGaca < 1:614917/149‑1 (MQ=255) ggggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCACCCCCTAACCCTCTCCCTCAGGGTGCGGGGGCCGTGCGGCGCTGTATGTAGACCCGCACTCGGAAACGGCAcc > 1:654056/1‑149 (MQ=255) gggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCAAACCCTCTCCCACAAGGAGAGGGGAACCGTCGGCCCTCGATGTACTCCCTGACACTGACACGACCCCg > 2:956210/1‑149 (MQ=255) cTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCAc < 1:623509/149‑1 (MQ=255) tAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCttt < 1:604919/149‑1 (MQ=255) aatgagTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCtttt < 1:940014/146‑1 (MQ=255) gagTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCCCCCTAACCCTCTCCCTCAGGGAGAGGGGACCGATCGGCGCTGTATGGACTACCTGACTCTGAAACGACACCGCACTAttttttt > 2:740441/1‑149 (MQ=255) gagGTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGGCGTTTGCGCCCCCTCACCCTACCCCTCTCCCTCAGGTAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCttttttt < 1:1128839/149‑1 (MQ=255) agTTGCCTGAGTCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGGGTGCGCCCCCTCACCCTAACCCTCACCCTCAGGGAGAGGGGACCGTTCGGCGCAGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTtc < 2:767248/149‑1 (MQ=255) tGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTcc < 2:733879/149‑1 (MQ=255) gCCTGCGGCACTGGCTCCCATGGCGAAAGGGTATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTccc < 2:390188/149‑1 (MQ=255) ccTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCCCCCTAACCCACTCCCTCAGGGAGACGGGACCGTTCGGCGCTGTATGTACTCCCTCCCACGGCAACGCCCCCGCCCGCATTTTTTCTccca > 1:539768/1‑148 (MQ=255) ccTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTGAGGGAGAGGGGGCCGTTCGGCGCGGTATGTGCTGCCTCACTCTGTTACGACACCGCCCGGGTTTTTTCTgccg > 1:582407/1‑148 (MQ=255) cTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGGCCCCGAACCCACTCCCTCAGGGAGAGGGGGCCCTTCGGGGGGGTTTGTACTGCCGCACTGGGGAACGACCCCGCCCGCTTTTTTTCTcccac > 1:300753/1‑147 (MQ=255) tGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGCCACCGCACTCTTTTTTTCTCCCTCg > 2:36908/1‑149 (MQ=255) tGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTACCTCAGGGATAGGGGACCGTTAGGCGCTGTATGTACTACCTCACTCTGAAACGACACCGGACTCTTTTTTTCTCCCtag > 2:730056/1‑147 (MQ=255) gCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCAAACCCTCTCCCTCAGGGAGAGGGGACCGTTAGGCGCGGTATGTACTCACTCACTCTGAAACGACACCGCACGCGTTTTTTCTACCACGcccc > 2:492296/1‑149 (MQ=255) tGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGACCCCTAACCCGCTCCCACCGGGAAGGGGGCCCGTTGGGCCCGGGATGTAAGCCCGCACGAAGAAACGCACCCGCCCGCGTTTTTTCTCCCTCGCCccgccg > 2:1141145/1‑149 (MQ=255) gcgcccATGGCGAAAGGGACTGCGGCATAGTCGGTTGCGCCCCCTCACCCTAACCCTCTCCCTCCGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCggg < 1:255037/146‑1 (MQ=255) gCTCCCAGGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCggg < 1:698684/149‑1 (MQ=255) tCCCATGGCGAAAGGGAATGTGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGga < 1:959486/149‑1 (MQ=255) tCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCCCCCTAACCCTCTCCCTCAGGGCGGGGGGGCCGTTCGGCGCTGTTTGTTGTCCCGCACTCTGCAACGAACCCGCCCGCGGGTTTTCTCCCTCGCCCCGCCggggg > 1:375391/1‑148 (MQ=255) cccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGACCCCTAACCCTCTACCTCAGGGCGAGGGGGCCGGTCGGCGCTGGAATTCCTCCCGGACTCTGAAACGCCACCCCACTCTTTTTTTTTGCCTGGCCCCGGCggggtg > 1:1008652/1‑147 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGgaga < 2:370862/149‑1 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTGCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGgaga < 2:869225/149‑1 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTACCCCAAACCCACTACCGAATGGAGCAGGGAACCTTGGGCGCAGTATTTACTACCTAACACAGAAACGACAACCCAAGCATTTTTTAACCCACGCCCCCCCGGGgaga > 2:1070661/1‑149 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCAAACCCTAACCCTAAACCTCACGGAGCAGGGACCGGTAGGCGGGTTTTGTACTCCCTCACACTGAACCGCCCCCGCCCTGCTTTTTTCTCCCTAGCCCCTCCGGGgagc > 2:1149129/1‑148 (MQ=255) aTGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTAGTCCCTGACTCTGAAACGACACCGCACGCTTTTTTTATCGCTCGCCCCTCCGGGGAGAgg > 2:754569/1‑149 (MQ=255) tGGCGAATGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGGTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAggg < 1:1151660/149‑1 (MQ=255) ggCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGGTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCTCCCCGGAGGGGCGAggga < 1:396030/149‑2 (MQ=255) cGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCg < 1:974771/149‑1 (MQ=255) gacaGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCgg < 1:739424/146‑1 (MQ=255) aaaGGGAATGCGGCATAGTGGTTTGCGCGCCCGCACCCTAACCCGCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACGCCCTCACTCTGACACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCggg < 2:333494/149‑1 (MQ=255) aaaGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCggg < 1:407802/149‑1 (MQ=255) gggAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGGCCGTTCGGCGCTGTATGTACTCCCGCACTCGGGAACGACCCCGCCCGCGTTTTTTGTACCGCGCCCCGCCGGGGAGGGGGGCgggggg > 2:525944/1‑147 (MQ=255) ggAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGa < 1:759637/149‑1 (MQ=255) actGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAACCGACCCCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgg < 1:74777/147‑1 (MQ=255) aaTGCGCCATAGTCGTGTGCGCCGCCTCACCCTCCCCCTCTCCCTCCGCGAGAGGGGACCGGTCGGCGCTGTATGTACTCCCTCACTCTCAACCGCCACCGCACTCTTTATTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgg < 2:290451/149‑1 (MQ=255) tGCGGCATAGTCGTTTGCGCCCCCTCACCTTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgggg < 2:485354/149‑1 (MQ=255) tGCGGCATAGTCGTTTGCGCCCCCGCCCCCTAACCCTCTCCCACAGGGAGATGGGACCGTGGGGGGCGGTAGGTACGCCCTCACTCTGAAACCACACCGCACGCTTTTTTTGGCCCGAGCCCCGGCCGGGTGCGGGCCGGGGTgggagg > 2:1057043/1‑144 (MQ=255) cGGCATAGTCGTTTGCGCCCCCTCACCCTACCCCTCTCCCTCAGGGAGAGGGGACCGTGCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGaa < 1:317337/149‑1 (MQ=255) cGGCATAGTCGTTTGCGCCCCCTCACCCTACCCCTCACCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCTCTCTGAAACCACACCGCACTCTTTTTTTCTCGCTGGCGCCTCCTGGGAGAGGGCCGGGGTGAGGGGaa < 1:286052/149‑1 (MQ=255) cGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCACAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCCGACGCTTTTTTTCTCCCTCGCCCCGCCGGGGAGAGGGGCGGGGTGCGGGGaa > 1:63467/1‑149 (MQ=255) cATAGTCGTTTGCGCCCCCTCACCCTAACCCACTCCCTCAAGGAGAGGGGACCGTTCGGCGCTGTATGTACACCCTCACTCTGAAACGCCCCCCCCCTCTTTTTTTCTCCCTCGCCCCTCCGGCGAGCGGGCCGGGGTGAGGGGAAAAg > 1:566433/1‑149 (MQ=255) aTAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTGTTTTTCTCCCTCGCCCCGCCGGGGAGAGGGGCGGGGTGAGGGGAAAAgg > 1:831465/1‑149 (MQ=255) aTAGTCGTTTGCGCCACCGCCCCCTACCCCTCTCCCTCCGTGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTCAAACGACCCCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGGGAGGGGAAAAgg < 1:1050268/149‑1 (MQ=255) gtggTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCATTCTGAAACCCCACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCg < 2:743803/146‑1 (MQ=255) gcgcCCCCTCACCCAACCCCTCTCCCTCCGGGAGAGGGGACCGGTCGGCGCTGTATGTACTCCCTCACTCTGAAACCACCCCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGTGAGGGCCGGGGTTAGGGGAAAAGGCCGCACTGCt < 1:493327/149‑1 (MQ=255) ccccTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGCCACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCAcc > 2:169752/1‑149 (MQ=255) ccccTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgg > 1:1146062/1‑127 (MQ=255) ccccTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgg < 2:1146062/127‑1 (MQ=255) caaaCCATAACCCTCCCCCCCAGGTTGTGTGCACCGTGCGGCGCTGTATGTACTCCCTACCTCTCAAACGACCCCTCACTCTTTTTTTCTCCCTCCCCCCTCCGGGTTGTGGGCGGGGGTTTGGGGAAAAGGCCGCACTGCTCACCAAt < 2:483524/146‑1 (MQ=255) cTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCCCTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGCGGGGAAAAGGCCGCACTGCTCACCAAt > 1:487284/1‑149 (MQ=255) aCCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCAGTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGCGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCCCCAAtttt > 1:148448/1‑149 (MQ=255) cccTACCCCCCTCCCTCCTGGAGAGGGGACCTTCCGGCGCTGTAGGTACCCCCTCACTCTCAAACTACACCTCACTCTTTTTAACACCCACGCCCCGCCGGTTAGAGGCCCGGGGTTAGGGGAAAAGGCCGCACTGCTCACCAATTTTc < 2:78927/149‑1 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCACACTCTGAAACGACACCGCACTCTATTTTTCTCCCTCGCCCCTCCGGGGAGAGGCCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCt > 2:1107465/1‑149 (MQ=255) cataccccTCTCCCGCCGGGAGAGGGGACCGTGCGGCGCTGTATGAACTCCCTCCCTCTGAAACCACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGTGGGCCGGGGTGTGGGGAAAAGGCCGCACTGCTCACCAATTTTCt < 2:72321/144‑1 (MQ=255) tAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCGCCAATTTTCTGc > 1:763511/1‑149 (MQ=255) aaaCCCTCTCCATACGGGAGTGGGAAACGTTCGTTGGTGTATGTACTCCCTCCTTCTCAAACTCCACCCCTATTTTTTTTTCTCCCTCGCCCCGCCGGGGCGTGGGCCGGGGTGTGTGTAAAAGGCCGCACTGCTCACCAATTTTCTGc < 2:538184/148‑1 (MQ=255) tccccTCTCCCTGAGGGAGAGGGTACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCCCTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAATAGGCCGCACTGCTCACCAATTTTCTGCt > 1:554061/3‑149 (MQ=255) aaCCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCt > 1:632211/1‑149 (MQ=255) ccccTCTCCCTGAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGTGGATAAGGCCGCACTGCTCACCAATTTTCTGCTa > 2:126383/2‑149 (MQ=255) cccTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTAt > 1:477289/1‑149 (MQ=255) cccTCAGGGAGAGGGGACCGGTCGGCGCTGTATGTCCTCCCTCACTCTGAACCGCCGGCGCACGCTTTTGTTCTCCCTCGCCCGTCCGGGGAGAGGGCCGGGGTGAGGGGAGAAGGCCGCACTGGTCAGCACTTTTCTGCTTTCCTGcc > 2:175224/1‑149 (MQ=255) ggAGAGGGGACCGTTCGGCGCTGTATGTACCCCCTCCCTCCGAAACGACACCGCACTCTTTTTTACCCCCCCCCCCCGCCGGGGAGAGGGCCGGGGGGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCAc < 1:173798/149‑1 (MQ=255) tgggtACCTTTCGGCGCTTTTTGAACTCCCTCATTCTTAAACCACACCGCACTCTTTTTTCCACCCTCCCCCCACCGGGGAGAGGGCCGGGGTGAGGGTAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAg < 2:582407/148‑1 (MQ=255) gggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACAAAggg > 1:141820/1‑149 (MQ=255) gggACCGTGCGGCGCTGTATGTACTCCCTCACTCTTAAACGACCCCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggg < 1:539294/149‑1 (MQ=255) gACGGTTCGGCGCTGTATGCGCTCCCTCCCTCTGAACCGCCACCGCACTTTTTTTTGCTCCCTCCCCCCTCCGGGGTGTGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggggg < 2:83280/149‑1 (MQ=255) gACCGTTCGGCGCTGTATGTACACCCTCACTCTTAAACCACCCCGCCCTCTTTTTTTCGCCCGCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggggg < 2:676419/149‑1 (MQ=255) acggctCGGCGGTTTATGAACTCCCACCCTCTCAAACTCCCCCGCACTTTTTTTTTCTACCCCGCCCCTCCGGGGAGCGGGCGGGGGGGCGGGGACAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGc < 2:1077986/144‑1 (MQ=255) ccGTTGGGCGCTGTAGTTACTCCCTCACTCTGAAACCACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCa < 2:831465/149‑1 (MQ=255) ttCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTa > 2:932047/1‑149 (MQ=255) tCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTTCACCCGCACTTACGGGGCAGTAt > 2:653414/1‑149 (MQ=255) ggCGCTGTTTTTACTCCCTCACTCTTAACCCACACCGCACTCTTTTATTGACCCTCGCCCCTCCGGGGTGCGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGc < 1:492296/149‑1 (MQ=255) gcgtTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGTGAGGGCCGGGGTGCGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCt < 1:740441/149‑1 (MQ=255) cgcTGTATCTACTCCCTCACTCTGAAACCCCACCGCACTCTTTTTTTCTCCCTCGCCCCACCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTa < 1:37412/149‑1 (MQ=255) ctttatgcaCTCCCTCACTCTGAAACGCCCCACCACTCTTTTTTACACCCGCGCCCCCCGGGGGAGAGGGCGGGGGGTGGGGGAAAAGGCCGCACGGCTCACCACTTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaaa < 1:78451/146‑1 (MQ=255) gtatgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACa > 2:167723/1‑149 (MQ=255) tgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCg > 1:675589/1‑149 (MQ=255) tttatCCCTCACTCTGAAACTACACCGCACTTTTTTTTTCCCCGTCGCCCCTCCGGGGAGAGGGCGGGTGTTCGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGt < 2:300753/145‑1 (MQ=255) gtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTACGGGGAGAGGGCCGGGGGGCGGGGAAACGGCCGCACTGCTCACCTATTTTCTGCTATCCTGCCCCCGCGCTAAGGGGGCAGTATGCTAAACATCGt > 2:246087/1‑149 (MQ=255) taCTCCCTCCCTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGCGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTa < 2:13925/149‑1 (MQ=255) taCTCCCTCACTCTGAACCGACACCGCACTCTTTTTTTCCCCCTCGCCCCCCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTa < 1:36908/149‑1 (MQ=255) taCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCAGCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCCACAATTTTCTGCTATCCTGCCCCCGCACAAAGGGGGCAGTATGCTAAACATCGTa > 2:1070419/1‑149 (MQ=255) aCTCCCTCACTCTGACACGACACCGCACTCTGTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCGCACCAATTTTCTGCTATCCTGCCCCCGCACGAAGGGGGCAGTAGGCGAAACATCGTAc > 2:763174/1‑149 (MQ=255) tCCCTCACTCTGAAACGCCACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACtt > 2:568732/1‑149 (MQ=255) tCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACtt > 2:466828/1‑149 (MQ=255) ccTCACTCTGAAACGACCCCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTa > 2:287366/1‑149 (MQ=255) ctcacactcacaCCACCCCGCACTCTTTTTACCGCCCCCGCCCCGCCGGGTTGCGGGCGGGGGGGTGGGTAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTAc < 1:126383/149‑1 (MQ=255) tctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAAcc > 1:964427/1‑149 (MQ=255) tctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGATCACCAATTTTCTGCTATCCTCCCCCCGCACTAAGCGGGCAGTATGCTAATCAACGTACTTTACGAAcc > 2:626233/1‑149 (MQ=255) tctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCCGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCCTACTTTCCGAccc > 2:381061/1‑149 (MQ=255) tGAACCGACCCCCCCCTCTTTTTTCCTCCCTCCCCCCGCCGGGGTGTGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAg < 1:523053/149‑1 (MQ=255) tGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCGCCGGGGAGAGGGCCGGGGTGAGGGGAAAGGCCCGCACTGCTCACCAATTTTATGCTATCCTGCCCCCGCAGTAGGGGGGCAGTATGCTAAACAGCGTACTTTCCGagcaag > 2:698678/1‑144 (MQ=255) gAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCAGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGa > 1:1013036/1‑149 (MQ=255) gAAACGACACCGCACTCTGTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCACTTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGa > 2:96037/1‑149 (MQ=255) cGACCCCGCACTCTTTTTTTCTCCCTCCCCCCCCGGGGTAGTGGGCCGGGGTGCGGGTAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAAtt < 2:403304/149‑1 (MQ=255) | TGCAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATT > NC_000913/3780953‑3781247 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |