| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,781,103 | A→C | 16.7% | intergenic (+86/‑112) | lldD → / → trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,781,103 | 0 | A | C | 16.7% | 188.0 / 2.1 | 108 | intergenic (+86/‑112) | lldD/trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base A (44/42); new base C (10/11); total (55/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 8.12e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 112 total aligned reads displayed.
CAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGC > NC_000913/3780955‑3781251 | cAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTGACCCTAAACCTCTCCCTCACGGTGAGGGGGCCGTTCGGCGGGGTATGTTCGCCCTCACTATGAAACGaca > 1:596079/1‑149 (MQ=255)cAGGGGCTGGGTAAAGAGTCGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGaca < 1:614917/149‑1 (MQ=255) ggggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCACCCCCTAACCCTCTCCCTCAGGGTGCGGGGGCCGTGCGGCGCTGTATGTAGACCCGCACTCGGAAACGGCAcc > 1:654056/1‑149 (MQ=255) gggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCAAACCCTCTCCCACAAGGAGAGGGGAACCGTCGGCCCTCGATGTACTCCCTGACACTGACACGACCCCg > 2:956210/1‑149 (MQ=255) cTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCAc < 1:623509/149‑1 (MQ=255) tAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCttt < 1:604919/149‑1 (MQ=255) aatgagTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCtttt < 1:940014/146‑1 (MQ=255) aaGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCttttt < 1:679328/149‑1 (MQ=255) gagTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCCCCCTAACCCTCTCCCTCAGGGAGAGGGGACCGATCGGCGCTGTATGGACTACCTGACTCTGAAACGACACCGCACTAttttttt > 2:740441/1‑149 (MQ=255) gagGTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGGCGTTTGCGCCCCCTCACCCTACCCCTCTCCCTCAGGTAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCttttttt < 1:1128839/149‑1 (MQ=255) agTTGCCTGAGTCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGGGTGCGCCCCCTCACCCTAACCCTCACCCTCAGGGAGAGGGGACCGTTCGGCGCAGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTtc < 2:767248/149‑1 (MQ=255) tGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTcc < 2:733879/149‑1 (MQ=255) gCCTGCGGCACTGGCTCCCATGGCGAAAGGGTATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTccc < 2:390188/149‑1 (MQ=255) ccTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTGAGGGAGAGGGGGCCGTTCGGCGCGGTATGTGCTGCCTCACTCTGTTACGACACCGCCCGGGTTTTTTCTgccg > 1:582407/1‑148 (MQ=255) cTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGGCCCCGAACCCACTCCCTCAGGGAGAGGGGGCCCTTCGGGGGGGTTTGTACTGCCGCACTGGGGAACGACCCCGCCCGCTTTTTTTCTcccac > 1:300753/1‑147 (MQ=255) tGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTACCTCAGGGATAGGGGACCGTTAGGCGCTGTATGTACTACCTCACTCTGAAACGACACCGGACTCTTTTTTTCTCCCtag > 2:730056/1‑147 (MQ=255) tGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGACCCCTAACCCGCTCCCACCGGGAAGGGGGCCCGTTGGGCCCGGGATGTAAGCCCGCACGAAGAAACGCACCCGCCCGCGTTTTTTCTCCCTCGCCccgccg > 2:1141145/1‑149 (MQ=255) gcgcccATGGCGAAAGGGACTGCGGCATAGTCGGTTGCGCCCCCTCACCCTAACCCTCTCCCTCCGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCggg < 1:255037/146‑1 (MQ=255) gCTCCCAGGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCggg < 1:698684/149‑1 (MQ=255) tCCCATGGCGAAAGGGAATGTGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGga < 1:959486/149‑1 (MQ=255) tCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCCCCCTAACCCTCTCCCTCAGGGCGGGGGGGCCGTTCGGCGCTGTTTGTTGTCCCGCACTCTGCAACGAACCCGCCCGCGGGTTTTCTCCCTCGCCCCGCCggggg > 1:375391/1‑148 (MQ=255) cccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGACCCCTAACCCTCTACCTCAGGGCGAGGGGGCCGGTCGGCGCTGGAATTCCTCCCGGACTCTGAAACGCCACCCCACTCTTTTTTTTTGCCTGGCCCCGGCggggtg > 1:1008652/1‑147 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGgaga < 2:370862/149‑1 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTGCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGgaga < 2:869225/149‑1 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTACCCCAAACCCACTACCGAATGGAGCAGGGAACCTTGGGCGCAGTATTTACTACCTAACACAGAAACGACAACCCAAGCATTTTTTAACCCACGCCCCCCCGGGgaga > 2:1070661/1‑149 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCAAACCCTAACCCTAAACCTCACGGAGCAGGGACCGGTAGGCGGGTTTTGTACTCCCTCACACTGAACCGCCCCCGCCCTGCTTTTTTCTCCCTAGCCCCTCCGGGgagc > 2:1149129/1‑148 (MQ=255) cATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCCCCCGAACCCGCTCCCTCAGGGAGGGGGGCCCGGTCGGCGCTGTTTGTACTCCCTCACTCTGAAACGGCCCCGCACTCTTTTTTTCTCCCTCGCCCCGCCGGGGagag > 1:57910/1‑149 (MQ=255) aTGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTAGTCCCTGACTCTGAAACGACACCGCACGCTTTTTTTATCGCTCGCCCCTCCGGGGAGAgg > 2:754569/1‑149 (MQ=255) tGGCGAATGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGGTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAggg < 1:1151660/149‑1 (MQ=255) cGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCg < 1:974771/149‑1 (MQ=255) gacaGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCgg < 1:739424/146‑1 (MQ=255) aaaGGGAATGCGGCATAGTGGTTTGCGCGCCCGCACCCTAACCCGCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACGCCCTCACTCTGACACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCggg < 2:333494/149‑1 (MQ=255) aaaGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCggg < 1:407802/149‑1 (MQ=255) aaaGGGAATGCGGCATAGTCGTCTGCGCCCCCTCCCCCTCACCCTCTCCCGCCGGGAGAGGGGACCGTGCGCCGCTGTCTGTACTCCCTCACTCTGACACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCggg < 1:89166/149‑1 (MQ=255) gggAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGGCCGTTCGGCGCTGTATGTACTCCCGCACTCGGGAACGACCCCGCCCGCGTTTTTTGTACCGCGCCCCGCCGGGGAGGGGGGCgggggg > 2:525944/1‑147 (MQ=255) ggAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGa < 1:759637/149‑1 (MQ=255) gAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAg < 1:199615/149‑1 (MQ=255) actGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAACCGACCCCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgg < 1:74777/147‑1 (MQ=255) aaTGCGGCATAGTCGGTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCCCTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgg < 2:262324/149‑1 (MQ=255) aaTGCGCCATAGTCGTGTGCGCCGCCTCACCCTCCCCCTCTCCCTCCGCGAGAGGGGACCGGTCGGCGCTGTATGTACTCCCTCACTCTCAACCGCCACCGCACTCTTTATTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgg < 2:290451/149‑1 (MQ=255) tGCGGCATAGTCGTTTGCGCCCCCTCACCTTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgggg < 2:485354/149‑1 (MQ=255) tGCGGCATAGTCGTTTGCGCCCCCGCCCCCTAACCCTCTCCCACAGGGAGATGGGACCGTGGGGGGCGGTAGGTACGCCCTCACTCTGAAACCACACCGCACGCTTTTTTTGGCCCGAGCCCCGGCCGGGTGCGGGCCGGGGTgggagg > 2:1057043/1‑144 (MQ=255) cGGCATAGTCGTTTGCGCCCCCTCACCCTACCCCTCTCCCTCAGGGAGAGGGGACCGTGCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGaa < 1:317337/149‑1 (MQ=255) cGGCATAGTCGTTTGCGCCCCCTCACCCTACCCCTCACCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCTCTCTGAAACCACACCGCACTCTTTTTTTCTCGCTGGCGCCTCCTGGGAGAGGGCCGGGGTGAGGGGaa < 1:286052/149‑1 (MQ=255) cATAGTCGTTTGCGCCCCCTCACCCTAACCCACTCCCTCAAGGAGAGGGGACCGTTCGGCGCTGTATGTACACCCTCACTCTGAAACGCCCCCCCCCTCTTTTTTTCTCCCTCGCCCCTCCGGCGAGCGGGCCGGGGTGAGGGGAAAAg > 1:566433/1‑149 (MQ=255) aTAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTGTTTTTCTCCCTCGCCCCGCCGGGGAGAGGGGCGGGGTGAGGGGAAAAgg > 1:831465/1‑149 (MQ=255) aTAGTCGTTTGCGCCACCGCCCCCTACCCCTCTCCCTCCGTGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTCAAACGACCCCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGGGAGGGGAAAAgg < 1:1050268/149‑1 (MQ=255) gtggTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCATTCTGAAACCCCACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCg < 2:743803/146‑1 (MQ=255) gcgcCCCCTCACCCAACCCCTCTCCCTCCGGGAGAGGGGACCGGTCGGCGCTGTATGTACTCCCTCACTCTGAAACCACCCCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGTGAGGGCCGGGGTTAGGGGAAAAGGCCGCACTGCt < 1:493327/149‑1 (MQ=255) ccccTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGCCACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCAcc > 2:169752/1‑149 (MQ=255) ccccTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgg > 1:1146062/1‑127 (MQ=255) ccccTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgg < 2:1146062/127‑1 (MQ=255) caaaCCATAACCCTCCCCCCCAGGTTGTGTGCACCGTGCGGCGCTGTATGTACTCCCTACCTCTCAAACGACCCCTCACTCTTTTTTTCTCCCTCCCCCCTCCGGGTTGTGGGCGGGGGTTTGGGGAAAAGGCCGCACTGCTCACCAAt < 2:483524/146‑1 (MQ=255) cTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCCCTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGCGGGGAAAAGGCCGCACTGCTCACCAAt > 1:487284/1‑149 (MQ=255) aCCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCAGTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGCGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCCCCAAtttt > 1:148448/1‑149 (MQ=255) cccTACCCCCCTCCCTCCTGGAGAGGGGACCTTCCGGCGCTGTAGGTACCCCCTCACTCTCAAACTACACCTCACTCTTTTTAACACCCACGCCCCGCCGGTTAGAGGCCCGGGGTTAGGGGAAAAGGCCGCACTGCTCACCAATTTTc < 2:78927/149‑1 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGGGCCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCGCACCAATTTTCt > 2:420843/1‑149 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCACACTCTGAAACGACACCGCACTCTATTTTTCTCCCTCGCCCCTCCGGGGAGAGGCCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCt > 2:1107465/1‑149 (MQ=255) cataccccTCTCCCGCCGGGAGAGGGGACCGTGCGGCGCTGTATGAACTCCCTCCCTCTGAAACCACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGTGGGCCGGGGTGTGGGGAAAAGGCCGCACTGCTCACCAATTTTCt < 2:72321/144‑1 (MQ=255) aaaCCCTCTCCATACGGGAGTGGGAAACGTTCGTTGGTGTATGTACTCCCTCCTTCTCAAACTCCACCCCTATTTTTTTTTCTCCCTCGCCCCGCCGGGGCGTGGGCCGGGGTGTGTGTAAAAGGCCGCACTGCTCACCAATTTTCTGc < 2:538184/148‑1 (MQ=255) tccccTCTCCCTGAGGGAGAGGGTACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCCCTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAATAGGCCGCACTGCTCACCAATTTTCTGCt > 1:554061/3‑149 (MQ=255) aaCCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCt > 1:632211/1‑149 (MQ=255) ccccTCTCCCTGAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGTGGATAAGGCCGCACTGCTCACCAATTTTCTGCTa > 2:126383/2‑149 (MQ=255) cccTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTAt > 1:477289/1‑149 (MQ=255) cccTCAGGGAGAGGGGACCGGTCGGCGCTGTATGTCCTCCCTCACTCTGAACCGCCGGCGCACGCTTTTGTTCTCCCTCGCCCGTCCGGGGAGAGGGCCGGGGTGAGGGGAGAAGGCCGCACTGGTCAGCACTTTTCTGCTTTCCTGcc > 2:175224/1‑149 (MQ=255) tgggtACCTTTCGGCGCTTTTTGAACTCCCTCATTCTTAAACCACACCGCACTCTTTTTTCCACCCTCCCCCCACCGGGGAGAGGGCCGGGGTGAGGGTAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAg < 2:582407/148‑1 (MQ=255) gggACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACAAAggg > 1:141820/1‑149 (MQ=255) gggACCGTTCGGCGCTGTATGTACTCCCACACTCTGAAACGACACCGCACTCTTTTTTAATCCCTCGCCCCGACGGGGAGAGGTCCGGGGTGAGGTGAAAAGGCCTCACTGCTCACCAATTTTCTGATATCCTCCCCCAGCACTAAgag > 2:1114740/1‑147 (MQ=255) gggACCGTGCGGCGCTGTATGTACTCCCTCACTCTTAAACGACCCCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggg < 1:539294/149‑1 (MQ=255) gACGGTTCGGCGCTGTATGCGCTCCCTCCCTCTGAACCGCCACCGCACTTTTTTTTGCTCCCTCCCCCCTCCGGGGTGTGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggggg < 2:83280/149‑1 (MQ=255) gACCGTTCGGCGCTGTATGTACACCCTCACTCTTAAACCACCCCGCCCTCTTTTTTTCGCCCGCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggggg < 2:676419/149‑1 (MQ=255) acggctCGGCGGTTTATGAACTCCCACCCTCTCAAACTCCCCCGCACTTTTTTTTTCTACCCCGCCCCTCCGGGGAGCGGGCGGGGGGGCGGGGACAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGc < 2:1077986/144‑1 (MQ=255) ccGTTGGGCGCTGTAGTTACTCCCTCACTCTGAAACCACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCa < 2:831465/149‑1 (MQ=255) ttCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTa > 2:932047/1‑149 (MQ=255) tCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTTCACCCGCACTTACGGGGCAGTAt > 2:653414/1‑149 (MQ=255) ggCGCTGTTTTTACTCCCTCACTCTTAACCCACACCGCACTCTTTTATTGACCCTCGCCCCTCCGGGGTGCGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGc < 1:492296/149‑1 (MQ=255) gcgtTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGTGAGGGCCGGGGTGCGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCt < 1:740441/149‑1 (MQ=255) cgcTGTATCTACTCCCTCACTCTGAAACCCCACCGCACTCTTTTTTTCTCCCTCGCCCCACCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTa < 1:37412/149‑1 (MQ=255) ctttatgcaCTCCCTCACTCTGAAACGCCCCACCACTCTTTTTTACACCCGCGCCCCCCGGGGGAGAGGGCGGGGGGTGGGGGAAAAGGCCGCACGGCTCACCACTTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaaa < 1:78451/146‑1 (MQ=255) cTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaaa > 2:632121/1‑149 (MQ=255) tgtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCg > 1:675589/1‑149 (MQ=255) tttatCCCTCACTCTGAAACTACACCGCACTTTTTTTTTCCCCGTCGCCCCTCCGGGGAGAGGGCGGGTGTTCGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGt < 2:300753/145‑1 (MQ=255) gtaCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTACGGGGAGAGGGCCGGGGGGCGGGGAAACGGCCGCACTGCTCACCTATTTTCTGCTATCCTGCCCCCGCGCTAAGGGGGCAGTATGCTAAACATCGt > 2:246087/1‑149 (MQ=255) taCTCCCTCCCTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGCGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTa < 2:13925/149‑1 (MQ=255) taCTCCCTCACTCTGAACCGACACCGCACTCTTTTTTTCCCCCTCGCCCCCCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTa < 1:36908/149‑1 (MQ=255) taCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTa > 1:476455/1‑149 (MQ=255) taCTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTa > 2:762647/1‑149 (MQ=255) tCCCTCACTCTGAAACGCCACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACtt > 2:568732/1‑149 (MQ=255) tCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACtt > 2:466828/1‑149 (MQ=255) ccTCACTCTGAAACGACCCCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTa > 2:287366/1‑149 (MQ=255) ctcacactcacaCCACCCCGCACTCTTTTTACCGCCCCCGCCCCGCCGGGTTGCGGGCGGGGGGGTGGGTAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTAc < 1:126383/149‑1 (MQ=255) tctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAAcc > 1:964427/1‑149 (MQ=255) tctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGATCACCAATTTTCTGCTATCCTCCCCCCGCACTAAGCGGGCAGTATGCTAATCAACGTACTTTACGAAcc > 2:626233/1‑149 (MQ=255) tctGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCCGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCCTACTTTCCGAccc > 2:381061/1‑149 (MQ=255) tGAACCGACCCCCCCCTCTTTTTTCCTCCCTCCCCCCGCCGGGGTGTGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAg < 1:523053/149‑1 (MQ=255) gAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCAGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGa > 1:1013036/1‑149 (MQ=255) gAAACGACACCGCACTCTGTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCACTTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGa > 2:96037/1‑149 (MQ=255) cGACCCCGCACTCTTTTTTTCTCCCTCCCCCCCCGGGGTAGTGGGCCGGGGTGCGGGTAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAAtt < 2:403304/149‑1 (MQ=255) cacCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGACGCACTGCTCACAAAATTTCTGCTATCCTGCCCACGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCg > 2:648664/1‑149 (MQ=255) acCTCACTCTTTTTTTCTCACTCGCCCCTCCTGGGAGAGGGCCGGGGTGCGGGGAAAAGGCCGCACTGCTCAACAATATTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGc < 2:760652/149‑1 (MQ=255) | CAGGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTGAAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGC > NC_000913/3780955‑3781251 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |