Predicted mutation | |||||||
---|---|---|---|---|---|---|---|
evidence | seq id | position | mutation | freq | annotation | gene | description |
RA | NC_000913 | 900,201 | T→G | 5.5% | K125N (AAA→AAC) | artJ ← | arginine ABC transporter periplasmic binding protein |
Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NC_000913 | 900,201 | 0 | T | G | 5.5% | 188.0 / 2.4 | 73 | K125N (AAA→AAC) | artJ | arginine ABC transporter periplasmic binding protein |
Reads supporting (aligned to +/- strand): ref base T (32/36); new base G (2/2); total (35/38) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 2.53e-01 |
TCACCAAATACCCCATCAATACGACCATTTTTCAGATCGATAAAGGCATTCTGATAACTGTCATAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTAAACGATACCTGTTTGCTACGCTCCGGGGTGATATCCATACCGGAGATTACGGCGTCATATTTTCTGAATTTCA > NC_000913/900055‑900349 | tCACCAAATACCCCATCAATACGACCATTTTTCAGATCGATAAAGGCATTCTGATAACTGTCATAAGAGACAGTTTTCACTTCCGGGTGCGGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCttt < 2:532068/149‑1 (MQ=255) cACCAAATACCCGATCAATACGACCATTTTTCAGATCGATAAAGGCATTCTGATAACTGTCATAAGATACAGTTTTCACTTCCTGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTc < 1:862853/149‑1 (MQ=255) aCCAAATACCCCATCAATACGACCATTTTTCAGATCGATAAAGGCATTCTGATAACTGTCATAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCa < 1:1094831/149‑1 (MQ=255) tACCCCATCAATACGACCATTTTTCAGATCGATAAAGGCATTCTGATAACTGTCATAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCgg < 2:923151/149‑1 (MQ=255) tACCCCATCAATACGACCATTTTTCAGATCGATAAAGGCATTCTGATAACTGTCATAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCgg < 2:939577/149‑1 (MQ=255) cccATCAATACGACCATTTTTCAGATCGATAAAGGCATTCTGATAACTGTCATAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCaa > 2:511793/1‑149 (MQ=255) cccATCAATACGACCATTTTTCAGATCGATAAAGGCATTCTGATAACTGTCATAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCaa > 2:441722/1‑149 (MQ=255) ccATCAATACGACCATTTTTCAGATCGATAAAGGCATTCTGATAACTGTCATAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCaaa < 1:511793/149‑1 (MQ=255) ccATCAATACGACCATTTTTCAGATCGATAAAGGCATTCTGATAACTGTCATAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCaaa > 1:570762/1‑149 (MQ=255) ccATCAATACGACCATTTTTCAGATCGATAAAGGCATTCTGATAACTGTCATAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCGATCTGAAAGGCaaa < 1:511585/149‑1 (MQ=255) ccATCAATACGACCATTTTTCAGATCGATAAAGGCATTCTGATAACTGTCAGAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTGTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCaaa > 2:814030/1‑149 (MQ=255) aTCAATACGACCATTTTTCAGATCGATAAAGGCATTCTGATAACTGTCATAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACg > 1:1180586/1‑149 (MQ=255) aTCAATACGACCATTTTTCAGATCGATAAAGGCATTCTGATAACTGTCATAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCGATCTGAAAGGCAAACg < 2:422526/149‑1 (MQ=255) cAATACGACCATTTTTCAGATCGATAAAGGCATTCTGATAACTGTCATAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGtt < 2:292221/149‑1 (MQ=255) tACGACCATTTTTCAGATCGATAAAGGCATTCTGATAACTGTCATAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTg > 1:113005/1‑149 (MQ=255) ccATTTTTCAGATCGATAAAGGCATTCTGATAACTGTCATAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCATTCAGATCGGCAAACGTTTTGTAGGt > 1:229293/1‑149 (MQ=255) cATTTTTCAGATCGATAAAGGCATTCTGATAACTGTCATAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTa > 1:516539/1‑149 (MQ=255) ttCAGATCGATATAGGCATTCTGATAACTGTCATAAGAGACAGTTTTCACTTCCTGGTGCTGTTCCTGAATATATTTCTTGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCATATCGGCAAACGTTTTGTAGGTATCttt < 1:953111/149‑1 (MQ=255) cAGATCGATAAAGGCATTCTGATAACTGTCATAAGAGACAGTTTTCACTTCCGGGGGCTGATCCTGAATATATTTCTGGTGCGTACTACCGTTTTCCATCCCAATCCGTGTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCttttt < 1:861007/149‑1 (MQ=255) agatagatAAAGGCATTCTGATAACTTTCATAAGAGACAGTTTTCACTTCAGGGTGATGAACCTGAATATATTTCTGGTGCCTACTACCGTTTTCCATCCAAATACGTTTGCCTTTCAGATAGGCAAACGTTTTGTAGGTATCtttttt > 1:586137/1‑149 (MQ=255) aGATCGATAAAGGCATTCTGATAACTGTCATAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCtttttt < 2:905167/149‑1 (MQ=255) aGATCGATAAAGGCATTCTGATAACTGTCATAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCtttttt > 1:811569/1‑149 (MQ=255) aGATCGATAAAGGCATTCTGATAACTGTCATAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCtttttt < 2:241024/149‑1 (MQ=255) gATCGATAAAGGCATTCTGATAACTTTCATAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTg < 2:875078/149‑1 (MQ=255) gATCGAAAAAGGCATTCTTATAACTGTCATAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCCTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTg < 2:66958/149‑1 (MQ=255) ttCGATAAAGGCTTTCTGATATCTGTCATAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTgg < 2:604885/148‑1 (MQ=255) aTCGATAAAGGCATTCTGATAACTGTCATAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTgg > 1:310210/1‑149 (MQ=255) aTCGATAAAGGCATTCTGATAACTGTCATAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTgg > 1:1150556/1‑149 (MQ=255) aTTCTGATAACTGTCATAAGAGACAGTTTTGACTTCCGGGAGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTAACTTTTTTTGCAATCAAGACgg > 2:361148/1‑149 (MQ=255) ttCTGATAACTGTCATAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGc < 1:441722/149‑1 (MQ=255) ttCTGATAACTGTCATAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGc > 2:335707/1‑149 (MQ=255) tGATAACTTTGATTAGATACAGTTTTCACTTGAGTGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGTTCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCTCGACGGCTGa < 1:654871/149‑1 (MQ=255) tGATAACTGTCATAAGAGACAGTTTTGACTTGCGGTTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCGTATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGa < 1:524437/149‑1 (MQ=255) gATAACTGTCATAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAg > 2:714650/1‑149 (MQ=255) aTAACTGTCATAAGAGACAGTTTTCCCTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGt > 1:998614/1‑149 (MQ=255) atggcATAAGAGACAGTTTTCACTTACGGGTGCTGATACTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTc < 2:863929/145‑1 (MQ=255) aTAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCAtagt < 2:941994/149‑1 (MQ=255) gagaCAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAggg > 1:929721/1‑149 (MQ=255) aCAGTTTTCACTTGCGGGTGCTGAGCCTTAATATTTTTCTGGTGCGTAGTACCGTTTTCCATCCCACTACGTTTGCCTTTCAGATCGGCTAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGt < 1:573463/149‑1 (MQ=255) ttttCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTa > 1:462112/1‑149 (MQ=255) tttCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTaa > 2:312874/1‑149 (MQ=255) ttaaattCCGGGTGCGGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTACATACCAATACGTTTGCCTTTACGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTaaa < 1:624548/144‑1 (MQ=255) tCACTTCCGGGTGCTGATCATGAATATATTTCTGGTGCGTAGTACCGCTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTAAAc < 2:986088/149‑1 (MQ=255) gTGCTGATCCTGAATATATTTCTGGGGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTAAACGATACCTGtt < 1:440217/149‑1 (MQ=255) tgctgcACCTGAATATATTGATGGCGCGTAGTACCGGATTGCATCCCAATACGTTTGCCTTTCAGATCGGCAAACTTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGCGCGTGGTAAACGAAACCTGttt < 2:939902/149‑1 (MQ=255) tGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTAAACGATACCTGttt > 1:355801/1‑149 (MQ=255) gCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTAAACGATACCTGTTTg < 1:241307/149‑1 (MQ=255) cTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTAAACGATACCTGTTTgg > 1:352861/1‑148 (MQ=255) tGATCCTGAATATATTTCTGGTGCGTAGTACCCTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGCCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTAAACGATACCTGTTTGCt > 1:590197/1‑149 (MQ=255) gacccTGAATATAATGTTTGTGCGTCGTCCCGCTTTCCCTCAAAATAATTTCGAATTTAAGATCGTCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTAAACGATACCTGTTTGCTa < 2:1186280/146‑1 (MQ=255) gATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTAAACGATACCTGTTTGCTa > 1:899415/1‑149 (MQ=255) gATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTAAACGATACCTGTTTGCTa < 1:244802/149‑1 (MQ=255) aTCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTAAACGATACCTGTTTGCTAc > 1:971159/1‑149 (MQ=255) cTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTAAACGATACCTGTTTGCTACGCt < 2:141448/149‑1 (MQ=255) aaTATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTAAACGATACCTGTTTGCTACGCTCCg < 2:516539/149‑1 (MQ=255) aaTATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTAAACGATACCTGTTTGCTACGCTCCg < 1:79668/149‑1 (MQ=255) tatatTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACCGCTGAGTTTACATAGTAGGGCGTGGTAACCGCTCCCTGTTTGCTACGCTCCggg > 2:698278/1‑149 (MQ=255) tatTTCTGGTGCGTAGTACCGTGTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTAAACGATACCTGTTTGCTACGCTCCGGGGt > 2:30712/1‑149 (MQ=255) atTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTAAACGATACCTGTTTGCTACGCTCCGGGGTg > 1:464225/1‑149 (MQ=255) atTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTGCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGCCGGCTGAGTTTTCATAGGAGGGCGTGGTAAACGATACCTGTTTGCTACGCTCCGGGGTg < 1:587333/149‑1 (MQ=255) cTGGGGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTAAACGATACCTGTTTGCTACGCTCCGGGGTGatat < 2:229293/149‑1 (MQ=255) gTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTCTCTTTTATGGCAAACACGACGGCTGAGGTTTCATAGTAGGGCGTGGTAAAAGATACCTGTTTGCTACGCTCCGGGGTGATATCCa > 1:585864/1‑149 (MQ=255) cGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTAAACGATACCTGTTTGCTACGCTCCGGGGTGATATCCATAc < 2:629802/149‑1 (MQ=255) ttaCCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTAAACGATACCTGTTTGCTACGCTCCGGGGTGATATCCATACCGga < 2:1160366/148‑1 (MQ=255) gtaCCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTAAACGATACCTGTTTGCTACGCTCCGGGGTGATATCCATACCGga < 1:335707/149‑1 (MQ=255) taCCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTAAACGATACCTGTTTGCTACGCTCCGGGGTGATATCCATACCGgag > 1:1097606/1‑149 (MQ=255) ccGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGAGTGGTAATCTATACCTGTTTGCTACGCTCCGGGGTGATATCCATAAAGGAGAt > 1:79454/1‑149 (MQ=255) cGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTGGGGAATCACGACGGCTGAGTGTTCATAGTAGGGGGTGGTAAGCGATTCCTGTTTGCTTCGCTCAGGGGTGATATCAATACCGGAGAtt > 2:686844/1‑149 (MQ=255) tCCATCCCAATACGTTTGCCTTTCAGATCCGCAAACGTTTTGTAGGTATCTTTTTTGGCTATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTAAACGATACCTGTTTGCTACGCTCCGTGGTGATATCCATACCGGAGATTACGGc < 2:871005/149‑1 (MQ=255) ccATCCCAATACGTTTGCCTTTCAGATCGGCTAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAATTTTCATAGTAGGGCGTGGTAAACGATACCTGTTTGCTACGCTCCGCGGTGATATACATACCGGAGATTACGGCg > 1:668016/1‑149 (MQ=255) acAAAACGTTTGCCGATCTGAAAGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTAAACGATACCTGTTTGCTACGCTCCGGGGTGATATCCATACCGGAGATTACGGCGTCatt > 1:600784/2‑148 (MQ=255) cAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTAAACGATACCTGTTTGCTACGCTCCGGGGTGATATACATACCGGAGATTAAGGCGTCatat > 1:1079676/1‑149 (MQ=255) aaCGTTTGCCGATCTGAAAGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTAAACGATACCTGTTTGCTACGCTCCGGGGTGATATGCATACCGGAGATTACGGCGTCATAtttt > 1:1026076/2‑149 (MQ=255) aCGTTTGCCTTTCAGATCGGCAATCGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTAAACGATACCTGTTTGCTACGCTCCGGGGTGATATCCATACCGGAGATTACGGCGTCATATTTTc < 1:361148/149‑1 (MQ=255) tttgaatttCAGATCGGGAAACGTTTTGTAGGTATCTTTTTAGGCAATCACAACGGCTGAGCTTTCAAAGTAGGGCGTCGTAAACGATACCTGTTTGCTACGCTCCGGGGTGATATCCATACCGGAGATTACGGCGTCATATTTTCTGa < 2:60514/143‑1 (MQ=255) tttCAGATCGGCAAACGTTTTGTATGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTATGGCGTGGTAAACGATACCTGTTTGCTACGCTCCGGGGTGATATACATACCGGAGATTACGGCGTCATATTTTGTGACTTTCa > 2:688114/1‑149 (MQ=255) | TCACCAAATACCCCATCAATACGACCATTTTTCAGATCGATAAAGGCATTCTGATAACTGTCATAAGAGACAGTTTTCACTTCCGGGTGCTGATCCTGAATATATTTCTGGTGCGTAGTACCGTTTTCCATCCCAATACGTTTGCCTTTCAGATCGGCAAACGTTTTGTAGGTATCTTTTTTGGCAATCACGACGGCTGAGTTTTCATAGTAGGGCGTGGTAAACGATACCTGTTTGCTACGCTCCGGGGTGATATCCATACCGGAGATTACGGCGTCATATTTTCTGAATTTCA > NC_000913/900055‑900349 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |