| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NC_000913 | 4,362,665 | A→C | intergenic (‑39/+68) | pheU ← / ← yjdC | tRNA‑Phe/putative transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,362,665 | 0 | A | C | 98.9% | 273.3 / NA | 91 | intergenic (‑39/+68) | pheU/yjdC | tRNA‑Phe/putative transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base C (48/42); total (49/42) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
TCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATATCTTCCGCCAGCCGATGTGCAGTGTCGA > NC_000913/4362525‑4362806 | tccacggAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGGTATCCGGGCGACGGGCCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAAttt > 2:1329900/6‑149 (MQ=21) cGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCTAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGTGCTATCCGTGCTACGGGGTGCATTAAACCGTATTCTGCAGATCTCGTCACCCTAATTTCa < 1:1070460/149‑1 (MQ=21) cGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCa < 1:783174/149‑1 (MQ=255) gTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAg > 1:471882/1‑149 (MQ=255) ccGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCg > 2:3085/1‑149 (MQ=255) cGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGa < 2:625162/149‑1 (MQ=255) gTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGAt > 2:48861/1‑149 (MQ=255) atatGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCaa < 1:531155/149‑1 (MQ=255) aaTTTGGTGCCCGGACTCGGAATCGAACAAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCGAACCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATACATCtccg > 2:187714/1‑146 (MQ=18) tttGGTGCCCGGACTCGGAAAAGAACCAAGGACACGGGGATTTTCAATCCACTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATATCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTa > 1:1277118/1‑149 (MQ=255) ttGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTaa < 1:661381/149‑1 (MQ=255) ggTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTaa > 1:940195/1‑119 (MQ=255) ggTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTaa < 2:940195/119‑1 (MQ=255) cGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCgg > 1:1356178/1‑149 (MQ=255) ggACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGc < 2:965638/149‑1 (MQ=255) tCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAAt < 2:320186/149‑1 (MQ=255) tCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAAt < 2:1356178/149‑1 (MQ=255) ggAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAACCCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCg > 1:1234204/1‑149 (MQ=255) ggAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCg > 2:1420642/1‑149 (MQ=255) ggAATAGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAACGCGATTCAACTGCTTAAGATAGCGGCAAATCg > 2:531822/1‑149 (MQ=255) aTCGAACCAAGGTCACGGGGATTTTCAATCCCCTTCTCTACCGACTGAGCTATCCGGGCAACGGGGATAATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGctt < 1:439830/149‑1 (MQ=37) tCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGctta > 2:677227/1‑148 (MQ=255) cGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTATGATTGCGGCAAATCGcttct > 1:923788/1‑149 (MQ=255) aaCCAAGGACACGGGGATTTTCAATCCCCTGCTCTCCCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCttt > 1:910685/1‑149 (MQ=255) aaCCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACCTCTCGTCACCATAAGTTCAGTAAATGCGAATCAACGGCTTAAGATTGCGGCAAATCGctaatgt > 2:803295/1‑144 (MQ=21) aCCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCtttt > 1:636462/1‑149 (MQ=255) aCCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCtttt < 2:659645/149‑1 (MQ=255) ccAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGGGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTc < 2:252243/149‑1 (MQ=255) cAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCt < 2:1193/149‑1 (MQ=255) aGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCtgt > 1:572371/1‑149 (MQ=255) aGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCACTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCtgt > 1:394519/1‑149 (MQ=255) ggACACGGGTATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAATCCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCtgtg < 2:362068/149‑1 (MQ=255) gACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTgtgt < 1:1197400/149‑1 (MQ=255) acacGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGtt > 1:921412/1‑149 (MQ=255) cacGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGttt > 2:1092417/1‑149 (MQ=255) cacGGCGATTTGCAATCCCCGGCTCTACCGACTTCGCTATCCTTGCAACTGGGCGCATTAAACCGTAAGCTGCACATCTCGTCTCCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGTTTGCGGAAAATCGCTTCTTTTCTGTGttt < 2:317676/149‑1 (MQ=255) acGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTc > 2:6608/1‑149 (MQ=255) cGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCt < 1:145515/149‑1 (MQ=255) cGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACAGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAATATTGCGGCAAATCGCTTCTTTTCTGTGTTTCt < 1:765475/149‑1 (MQ=255) aggggATTGAAAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAACCCGTAATCTGCACCTCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCt > 1:295520/2‑149 (MQ=38) ggggATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCCCATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTGTGTGTTTCTg > 2:354242/1‑149 (MQ=255) ggggATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTg > 1:168426/1‑149 (MQ=255) gggATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGt < 1:489042/149‑1 (MQ=255) gggATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGt > 1:1167596/1‑149 (MQ=255) gATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTACTTTCAGTAAAAGCTATTCAACTGCTTATGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGtaa > 1:1189080/1‑147 (MQ=255) gATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCa < 1:870331/149‑1 (MQ=255) attgaaaaTCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCCCCTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAg > 1:373196/7‑149 (MQ=38) aTTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCATATCGCTTCTTTTCTGTGTTTCTGTCAg < 2:572917/149‑1 (MQ=255) aTTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAg < 2:579234/149‑1 (MQ=255) aTTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGCGCAACGGGGCCCATTAAACCGAAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCTACTGCTTAAGATAGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAg > 1:33005/1‑149 (MQ=38) ttCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTc > 1:1406686/1‑149 (MQ=255) cAATCCCCTGCTCTACCGACTGATCTATCCGTGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCaa < 2:1289674/149‑1 (MQ=255) cAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACCTCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCaa < 2:1127959/149‑1 (MQ=255) cAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTATGTTTCTGTCAGGTCaa < 2:587681/149‑1 (MQ=255) cccTGCTCTACCGCCTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTGTGTGTTTCTGTCAGGTCAATGcac > 2:939466/1‑149 (MQ=255) cccTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACGCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGccc > 2:1323585/1‑147 (MQ=255) cccTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGcac < 1:829184/149‑1 (MQ=255) ccTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAACAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGcacc < 2:544591/149‑1 (MQ=255) gCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCaccacc < 1:1197624/149‑1 (MQ=255) ctACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTg < 1:1161584/149‑1 (MQ=255) tACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTgg > 1:1228344/1‑149 (MQ=255) tGAGCTATCCGGTCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTATAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGGTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGc > 2:99584/1‑149 (MQ=255) aGCTATCCGGGCAACGGGGTGCATTAAACCGTAATCTGCACATCTCGTCACCCAAATTTCAGTAAAAGCGATTCAACTGATTAAGATTGCGGCAAATCTCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCgg > 2:1162986/1‑149 (MQ=255) aGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCgg > 2:594050/1‑149 (MQ=255) aGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCgg > 1:565556/1‑149 (MQ=255) aGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCgg < 1:48861/149‑1 (MQ=255) gCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGGCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCggg < 1:1153998/149‑1 (MQ=255) aTCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGa > 2:26792/1‑149 (MQ=255) tCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGaa > 1:1389345/1‑149 (MQ=255) ccGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAg < 1:1420642/149‑1 (MQ=255) ccGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAg < 1:705769/149‑1 (MQ=255) cGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAgc > 2:1053070/1‑149 (MQ=255) ggCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAgcgc > 2:1295169/1‑149 (MQ=255) aCGGGGCGCATTAAACCGTAATCTGCACATCTCGTAACCCTAATTTCAGTAAAAGCTATTCAACTGCTTAAGATTGCGGCTAATCGCTTCATTTCTTTGTTTATGTCATGTCATATCACCACCCTGGCGGCAGAGGGCGAAGCGCTGGa > 1:788507/1‑149 (MQ=255) cGGGGCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGat < 2:636462/149‑1 (MQ=255) gggCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGatat < 1:480284/149‑1 (MQ=255) gggCGCATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGGCAATTCACAACCATGGCGGCAGCTGGCGAAGCCCAGGatat > 2:181690/1‑149 (MQ=255) cgcATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATATCtt < 2:1206598/149‑1 (MQ=255) cATTAAACCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATATCTTcc < 1:1026152/149‑1 (MQ=255) aaCCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATATCTTCCGCCAg > 1:250941/1‑149 (MQ=255) aCCGTAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCTAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATATCTTCCGCCAGc > 2:388432/1‑149 (MQ=255) ccGTAATCTGCCCATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATATCTTCCGCCAGcc > 2:75094/1‑149 (MQ=255) tAATCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATATCTTCCGCCAGCCGAt < 2:471882/149‑1 (MQ=255) aTCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCggg > 2:310208/1‑117 (MQ=255) aTCTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCggg < 1:310208/117‑1 (MQ=255) cTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATATCTTCCGCCAGCCGATGTGc < 1:3085/149‑1 (MQ=255) cTGCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCATTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATATCTTCCGCCAGCCGATGTGc < 1:803295/149‑1 (MQ=255) gCACATCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATTTCTTCCGCCAGCCGATGTGCAg > 1:838897/1‑149 (MQ=255) caTCTCGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATATCTTCCGCCAGCCGATGTGCAgtgt > 1:462099/1‑149 (MQ=255) ctcGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATATCTTCCGCCAGCCGATGTGCAGTGTCGa > 1:637324/1‑149 (MQ=255) ctcGTCACCCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCCGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATATCTTCCGCCAGCCGATGTGCAGTGTCGa < 2:942506/149‑1 (MQ=255) | TCCGTGGAGGTCCGTTTATATGAATTTGGTGCCCGGACTCGGAATCGAACCAAGGACACGGGGATTTTCAATCCCCTGCTCTACCGACTGAGCTATCCGGGCAACGGGGCGCATTAAACCGTAATCTGCACATCTCGTCAACCTAATTTCAGTAAAAGCGATTCAACTGCTTAAGATTGCGGCAAATCGCTTCTTTTCTGTGTTTCTGTCAGGTCAATGCACCACCCTGGCGGCAGCGGGCGAAGCGCAGGATATCTTCCGCCAGCCGATGTGCAGTGTCGA > NC_000913/4362525‑4362806 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |