New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 4108571 =NA (NA)9 (0.020) 5/264 NT NA noncoding (1/98 nt) RIP302 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP302 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
?NC_000913 4108596 = NA (NA)noncoding (26/98 nt) RIP302 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site RIP302 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 494 total aligned reads displayed.

CAGCTGGTTCACCACGACATCATCGACGCTATCGAAAACATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGTCAGCAATATGAGGCGGATTTCTTCCGCCTTTT  >  NC_000913/4108422‑4108720
                                                                                                                                                     |                                                                                                                                                     
  gcgggtatatgttgagggattaaaaaggcggaagaaatccgcctcatattgctgacaaagtgcgctttgtccatgccggatgcggcgcgaacgccttatccggcctacaaaagtttgcaaattcaataaattgcagaattcatgtagGcc                                                                                                                                                     <  1:6574222‑M1/3‑1 (MQ=255)
    gggtatatgttgagggattaaaaaggcggaagaaatccgcctcatattgctgacaaagtgcgctttgtccatgccggatgcggcgcgaacgccttatccggcctacgaaagtttgcacattcaataaattgcagactgcatgtagGCCTg                                                                                                                                                   <  2:3248525‑M1/5‑1 (MQ=255)
    gggtatatgttgagggattaaaaaggcggaagaaatccgcctcatattgctgacaaagtgcgctttgtccatgccggatgcggcgcgaacgccttatccggcctacaaaagtttgcaaattcaataaattgcagaattcatgtagGCCTg                                                                                                                                                   <  2:1879387‑M1/5‑1 (MQ=255)
    gggtatatgttgagggattaaaaaggcggaagaaatccgcctcatattgctgacaaagtgcgctttgtccatgccggatgcggcgcgaacgccttatccggcctacaaaagtttgcaaattcaataaattgcagaattcatgtagGCCTg                                                                                                                                                   <  1:5393317‑M1/5‑1 (MQ=255)
    gggtatatgttgagggattaaaaaggcggaagaaatccgcctcatattgctgacaaagtgcgctttgtccatgccggatgcggcgcgaacgccttatccggcctacaaaagtttgcaaattcaataaattgcagaattcatgtagGCCTg                                                                                                                                                   <  1:4595245‑M1/5‑1 (MQ=255)
     ggtatatgttgagggattaaaaaggcggaagaaatccgcctcatattgctgacaaagtgcgctttgtccatgccggatgcggcgcgaacgccttatccggcctacaaaagtttgcaaattcaataaattgcagaattcatgtagGCCTGa                                                                                                                                                  >  1:1017478‑M1/145‑150 (MQ=255)
     ggtatatgttgagggattaaaaaggcggaagaaatccgcctcatattgctgacaaagtgcgctttgtccatgccggatgcggcgcgaacgccttatccggcctacaaaagtttgcaaattcaataaattgcagaattcatgtagGCCTGa                                                                                                                                                  <  1:4740621‑M1/6‑1 (MQ=255)
      gtatatgttgagggattaaaaaggcggaagaaatccgcctcatattgctgacaaagtgcgctttgtccatgccggatgcggcgcgaacgccttatccggcctacaaaagtttgcaaattcaataaattgcagaattcatgtagGCCTGAt                                                                                                                                                 <  1:4460072‑M1/7‑1 (MQ=255)
      gTTCACCACGACATCGTCGACGCTATCGAAAACATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGAt                                                                                                                                                 >  2:4638475/1‑150 (MQ=255)
       ttCACCACGACATCATCGACGCTATCGAAAACATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATg                                                                                                                                                <  2:5357029/150‑1 (MQ=255)
        tCACCACGACATCATCGACGCTATCGAAAACATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATgc                                                                                                                                               >  1:5247039/1‑150 (MQ=255)
        tCACCACGACATCATCGACGCTATCGAAAACATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATgc                                                                                                                                               >  1:3760797/1‑150 (MQ=255)
            cacGACATCATCGACGCTATCGAAAACATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGcgctt                                                                                                                                           >  2:1573358/1‑150 (MQ=255)
             acGACATCATCGACGCTATCGAAAACATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGcgcttc                                                                                                                                          <  2:3138076/150‑1 (MQ=255)
               gACATCATCGACGCTATCGAAAACATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGcgcttcgc                                                                                                                                        <  1:2619933/150‑1 (MQ=255)
                 catcatCGACGCTATCGAAAACATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGcgcttcgctt                                                                                                                                      <  1:87670/150‑1 (MQ=255)
                  atcatcGACGCTATCGAAAACATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTa                                                                                                                                     >  1:5568139/1‑150 (MQ=255)
                  atcatcGACGCTATCGAAAACATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTa                                                                                                                                     <  2:246049/150‑1 (MQ=255)
                     ttaaaaaggcggaagaaatccgcctcatattgctgacaaagtgcgctttgtccatgccggatgcggcgcgaacgccttatccggcctacaaaagtttgcaaattcaataaattgcagaattcatgtagGCCTGATGCGCTTCGCTTATCa                                                                                                                                  >  2:2647362‑M1/129‑150 (MQ=255)
                      tcGACGCTATCGAAAACATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAg                                                                                                                                 <  1:3011219/150‑1 (MQ=255)
                      tcGACGCTATCGAAAACATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAg                                                                                                                                 <  2:72672/150‑1 (MQ=255)
                        gACGCTATCGAAAACATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGc                                                                                                                               <  1:3951401/150‑1 (MQ=255)
                          cGCTATCGAAAACATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCt                                                                                                                             >  2:4930576/1‑150 (MQ=255)
                            cTATCGAAAACATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTAc                                                                                                                           >  1:703921/1‑150 (MQ=255)
                             tATCGAAAACATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACa                                                                                                                          >  1:3448095/1‑150 (MQ=255)
                              aTCGAAAACATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTCCCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACAt                                                                                                                         >  2:3938994/1‑150 (MQ=255)
                                 gAAAACATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGaa                                                                                                                      <  1:2483042/150‑1 (MQ=255)
                                  aaaaCATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCCTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAAt                                                                                                                     >  1:16612/1‑150 (MQ=255)
                                   aaaCATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAATTGCCTGATGCGCTTCGCTTATCAGGCCTACATGAAtt                                                                                                                    >  1:1235597/1‑150 (MQ=255)
                                   aaaCATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAAtt                                                                                                                    <  1:5663182/150‑1 (MQ=255)
                                   aaaCATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAAtt                                                                                                                    >  1:5869507/1‑150 (MQ=255)
                                   aaaCATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAAtt                                                                                                                    >  1:3904/1‑150 (MQ=255)
                                     aatccgcctcatattgctgacaaagtgcgctttgtccatgccggatgcggcgcgaacgccttatccggcctacaaaagtttgcaaattcaataaattgcagaattcatgtagGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCt                                                                                                                  >  2:1039652‑M1/113‑150 (MQ=255)
                                     aCATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCt                                                                                                                  <  1:276755/150‑1 (MQ=255)
                                     aCATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCt                                                                                                                  <  1:1844666/150‑1 (MQ=255)
                                      cATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTACTGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTg                                                                                                                 <  2:3970714/150‑1 (MQ=255)
                                      cATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTg                                                                                                                 <  1:3504272/150‑1 (MQ=255)
                                       aTGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGATAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGc                                                                                                                <  2:1772542/150‑1 (MQ=255)
                                             cGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTa                                                                                                          <  1:5938588/150‑1 (MQ=255)
                                               tCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAATCATACATGCCTGATGCGCTTCGATTATCAGGCCTACATGAATTCTGCAATTTAtt                                                                                                        <  2:5263645/150‑1 (MQ=255)
                                               tCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTAtt                                                                                                        >  2:6111868/1‑150 (MQ=255)
                                               tCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTAtt                                                                                                        <  2:3773787/150‑1 (MQ=255)
                                                  gTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGaa                                                                                                     <  1:2707901/150‑1 (MQ=255)
                                                      aaaGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTg                                                                                                 <  2:2001039/150‑1 (MQ=255)
                                                              ctggctggACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACttt                                                                                         <  1:2976188/150‑1 (MQ=255)
                                                               tggctggACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACtttt                                                                                        >  1:3688032/1‑150 (MQ=255)
                                                                ggctggACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTg                                                                                       >  2:5516284/1‑150 (MQ=255)
                                                                 gctggACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGt                                                                                      >  2:3701148/1‑150 (MQ=255)
                                                                   tggACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTGTTGTAg                                                                                    >  1:3182176/1‑150 (MQ=255)
                                                                     gACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGc                                                                                  >  2:1460144/1‑150 (MQ=255)
                                                                        tGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCgg                                                                               >  1:4972627/1‑150 (MQ=255)
                                                                          cgcgAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGAt                                                                             <  1:4224216/150‑1 (MQ=255)
                                                                            cgAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATaa                                                                           <  2:6061577/150‑1 (MQ=255)
                                                                            cgAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATaa                                                                           <  1:2205627/150‑1 (MQ=255)
                                                                               aaaaaCTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGc                                                                        <  2:2115652/150‑1 (MQ=255)
                                                                                     tGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTcgc                                                                  >  1:6436076/1‑150 (MQ=255)
                                                                                      gTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTcgcg                                                                 <  1:3043249/150‑1 (MQ=255)
                                                                                      gTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTcgcg                                                                 <  2:4740642/150‑1 (MQ=255)
                                                                                              gATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATcc                                                         <  2:1338379/150‑1 (MQ=255)
                                                                                              gATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATcc                                                         <  2:5064981/150‑1 (MQ=255)
                                                                                                  tCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCa                                                     <  2:3478079/150‑1 (MQ=255)
                                                                                                  tCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCa                                                     <  2:30234/150‑1 (MQ=255)
                                                                                                     gAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGATTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCAAgg                                                  >  1:4122272/1‑150 (MQ=255)
                                                                                                      aaaaaGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGa                                                 <  2:4838648/150‑1 (MQ=255)
                                                                                                          aGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTTCAAACTTTTGTAGGCCGGATATGGCTTTCGCGCCGCATCCGGCATGGACaaa                                             <  1:6111868/150‑1 (MQ=255)
                                                                                                          aGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACaaa                                             <  2:3620560/150‑1 (MQ=255)
                                                                                                           ggCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATc                                                          <  2:2886983/136‑1 (MQ=255)
                                                                                                            gCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAgc                                           >  1:3301118/1‑150 (MQ=255)
                                                                                                              aGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAgcgc                                         <  1:1139302/150‑1 (MQ=255)
                                                                                                                aTTCCTTTACCCTGAAACCGATGACAGAAGCAAACATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCAc                                       <  2:5876937/150‑1 (MQ=255)
                                                                                                                  tCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACtt                                     >  2:4155736/1‑150 (MQ=255)
                                                                                                                     tttACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGACTTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGt                                  >  2:4284564/1‑150 (MQ=255)
                                                                                                                     tttACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAACGTGCGCTTTGt                                  <  2:3369260/150‑1 (MQ=255)
                                                                                                                     ttgaCCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAAGTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGt                                  <  1:1370018/147‑1 (MQ=255)
                                                                                                                      ttACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGTc                                 >  2:2718498/1‑150 (MQ=255)
                                                                                                                      ttACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGTc                                 >  2:2372678/1‑150 (MQ=255)
                                                                                                                      ttACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGTc                                 <  1:2062005/150‑1 (MQ=255)
                                                                                                                       tACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGTCa                                <  1:5164471/150‑1 (MQ=255)
                                                                                                                       tACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGTCa                                <  1:1460150/150‑1 (MQ=255)
                                                                                                                          ccTGACACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAAGTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGTCAGCa                             <  2:6528175/150‑1 (MQ=255)
                                                                                                                          ccTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGTCAGCa                             >  2:5629602/1‑150 (MQ=255)
                                                                                                                          ccTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGTCAGCa                             >  1:3358045/1‑150 (MQ=255)
                                                                                                                          ccTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAAGTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGTCAGCa                             >  2:6215464/1‑150 (MQ=255)
                                                                                                                           cTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGTCAGCaa                            >  2:64423/1‑150 (MQ=255)
                                                                                                                            tGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGTCAGCAat                           >  1:6028574/1‑150 (MQ=255)
                                                                                                                             gAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGTCAGCAata                          >  2:898602/1‑150 (MQ=255)
                                                                                                                                aCCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGTCAGCAATATGa                       <  2:4033095/150‑1 (MQ=255)
                                                                                                                                aCCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGTCAGCAATATGa                       <  2:1829032/150‑1 (MQ=255)
                                                                                                                                   gATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGTCAGCAATATGAGGc                    >  1:3577642/1‑150 (MQ=255)
                                                                                                                                      gACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGTCAGCAATATGAGGCGGa                 <  1:4930576/150‑1 (MQ=255)
                                                                                                                                        cAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGCTAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGTCCGCAATATGAGGCGGAtt               >  1:5955662/1‑150 (MQ=255)
                                                                                                                                        cAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGTCAGCAATATGAGGCGGAtt               >  1:506408/1‑150 (MQ=255)
                                                                                                                                         aGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGTCAGCAATATGAGGCGGAttt              <  2:3842196/150‑1 (MQ=255)
                                                                                                                                             gCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCGGGCATGGACAAAGCGCACTTTGTCAGCAATATGAGGCGGATttcttc          <  2:2275488/150‑1 (MQ=255)
                                                                                                                                              cAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGTCAGCAATATGAGGCGGATTTCTTcc         >  2:4455682/1‑150 (MQ=255)
                                                                                                                                              cAAAAATGCCTGATGCGATTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTGTGTCAGCAATATGAGGCGGATTTCTTcc         >  2:3052869/1‑150 (MQ=255)
                                                                                                                                               aaaaaTGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGTCAGCAATATGAGGCGGATTTCTTCCg        >  1:5496256/1‑150 (MQ=255)
                                                                                                                                                    tGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGTCAGCAATATGAGGCGGATTTCTTCCGCCttt   <  2:366088/150‑1 (MQ=255)
                                                                                                                                                     GCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGTCAGCAATATGAGGCGGATTTCTTCCGCCtttt  >  1:3202158‑M1/1‑150 (MQ=255)
                                                                                                                                                     GCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTGTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGTCAGCCATATGAGGCGGATTTCTTCCGCCtttt  <  2:1205856‑M1/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                     
CAGCTGGTTCACCACGACATCATCGACGCTATCGAAAACATGAAGCGTCCGTTCAAAGGTGACTGGCTGGACTGCGCGAAAAAACTGTATTAATGATTTCGGAAAAAGGCAGATTCCTTTACCCTGAAACCGATGACAGAAGCAAAAATGCCTGATGCGCTTCGCTTATCAGGCCTACATGAATTCTGCAATTTATTGAATTTGCAAACTTTTGTAGGCCGGATAAGGCGTTCGCGCCGCATCCGGCATGGACAAAGCGCACTTTGTCAGCAATATGAGGCGGATTTCTTCCGCCTTTT  >  NC_000913/4108422‑4108720

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.