| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,177,279 | C→A | 6.3% | intergenic (‑75/+233) | gatY ← / ← fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,177,279 | 0 | C | A | 6.3% | 807.8 / 9.8 | 269 | intergenic (‑75/+233) | gatY/fbaB | D‑tagatose 1,6‑bisphosphate aldolase 2, catalytic subunit/fructose‑bisphosphate aldolase class I |
| Reads supporting (aligned to +/- strand): ref base C (120/122); new base A (20/6); total (141/128) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.19e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 278 total aligned reads displayed.
AATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGCTTC > NC_000913/2177130‑2177428 | aaTATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATc < 2:3301010/150‑1 (MQ=255)aaTATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATc < 1:2500642/150‑1 (MQ=255) atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAGTGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATca < 1:6123607/150‑1 (MQ=255) atatTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATca < 1:4842013/150‑1 (MQ=255) actGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACaaaaa < 1:2273778/148‑1 (MQ=255) aaTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACaaaaa > 2:512203/1‑150 (MQ=255) aTGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAAc < 2:5576181/150‑1 (MQ=255) ccGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTGAAAATATAATGAAATTATTTGTTTTTAAATATAGAGATAACG‑ATAAACAAAAAGAc > 1:2014078/1‑150 (MQ=255) cGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGCTTTCAAAAAATAATGAAAGTATTTGTTTTTAAATATCGAGAGAACC‑AGCACCAAAACcaca > 2:3930438/1‑150 (MQ=255) cGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTGAAAAAATAATTAAATTATTTTTTTTTTAATATAGAGATAAAG‑ATCACaaaaaacaca > 1:2907807/1‑145 (MQ=255) gCATAACCGCCGCGCTGTGTGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTAGATTTAAAAATATAATTAAATTTTTTTTTTTTTAATATGGAGATAAAG‑ATAAAAAAAAAGAGAATATG‑aa > 1:1010979/1‑150 (MQ=255) gCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCTATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑aa < 2:1837142/150‑1 (MQ=255) gCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTAGATTTGAAAATATAATTAAATTATTTTTTTTTTAATTTAGATATTAAG‑ATAAAAAAAAAGACAAGATT‑aa > 1:254580/1‑150 (MQ=255) gCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTAAAAAAATAATTAAATTATTTTTTTTTAAATATCGAGATAACG‑ATCACAAAAAAGACAATATG‑aa > 1:675695/1‑150 (MQ=255) ccgccgCGCGGTGCGTTGTTCAGCATCTGCTTTGTCTATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAattat < 2:5000798/150‑1 (MQ=255) cgcgCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCgc > 2:503275/1‑149 (MQ=255) cgcgCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCga < 2:4843546/150‑1 (MQ=255) cgcgCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTCGATTTCAAAATATAATGAAAATATTTTTTTTTAAATATAGAGATAAAG‑ATCACAAAAACGACAAAATG‑AAAattattagg > 2:5250127/1‑147 (MQ=255) gcTGTGCGTTTTCCAGCATCTGCTTTGTCGACACCACGAACATTTTCATAACCTGTCTTTTTTTTTCTATTAAAAAATATAATTAAATTATTTTTTTTTAAATATCGATATAACG‑AACACAAAAACGACAATATG‑AAAATTATTCgagga < 1:6578552/150‑1 (MQ=255) cGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTCCATTTAAAAATATAAAGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAAAAAG‑AAAATTATTCGAGGAG‑TGaaa > 2:6580758/1‑150 (MQ=255) cGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGaaa < 2:5753853/150‑1 (MQ=255) cGTTGTTCAGCATCTGCTTGGTCGATACCACGAACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGaaa < 2:5284309/150‑1 (MQ=255) gttgttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTTTTTTCGGATTAAAAAAATAATGTAATTATTTTTTTTTAAAAAAAGAGAGAAAG‑AACACAAAAAAGCCAAAATG‑AAAATTTTTTGTGGAG‑TGTAAg > 1:5938721/1‑150 (MQ=255) ttgttCAGCATCGGATTTGTCTATACCACCTAAATTTTCATAGCCTGTCTTTTTTTTTCTATTACAAAATATAATCAAATTATTTTTTTTTAAATATCTAGATAACG‑AACACAAACACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAgg < 1:42396/150‑1 (MQ=255) ttCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCaa > 2:1621215/1‑150 (MQ=255) gaaTCTGATTTGTCGATACCACTTAAATTTTCATATCCTTTCTTTTGTTTTCTATTTAAAATTATAATTAAATTTTTTTTTTTTAAATATCGATATAACT‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCaaaaaa < 1:3838347/148‑1 (MQ=255) gCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTAAAAATATAATGAAATTATTTTTTTTTAAATATCGAGATAACG‑ATCACAAAAAAGACAATATG‑AAAATTATTAGAGGAG‑TGAAAGGCaaaaaa > 2:3252820/1‑150 (MQ=255) gCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTAGATTTAAAAAAATAATTAAAATATTTTTTTTTTAATATAGAGATTAAG‑ATAAAAAAAAAAAAAAAAAT‑AAAATTATTAGAGGTG‑TTAGAGGCaaaaaa > 1:3365775/1‑150 (MQ=255) aTCTTCTTTTTCGATACCACGTAAATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATTAAATTTTTTTTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAAc < 2:1682408/150‑1 (MQ=255) aTCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAAc < 2:1102887/150‑1 (MQ=255) tCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACg < 2:5923970/150‑1 (MQ=255) cTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTTTTTTAGATTTAAAAATAAAAATAAAATATTTTTTTTTTAAAATAAAGATAAAA‑AAAAAAAAAAAAAAAAAATT‑AAAAAAATTAGAGGAGTTGAAGGGAAAAAAAACg > 1:441854/1‑150 (MQ=255) cTTTGTCGATACCACGTACATTTTCATATCCTGTCGTGTGTTTTGGGTTTGAAAATATAAATTAAATATTTTTTTTTTAATATATAGATAAAGAAAAAAAAAAACAAAAAAATG‑AAAA‑TATTAGTGGAG‑TGTAAGGCAAAAAAAAGGcca > 1:3152186/1‑149 (MQ=255) gTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAAAAAAAAGAAAAAATTTTTTTTTAAATATAGAGATAACG‑ATCAAAAAAAAGACAATAAT‑AAAATTATTAGAGGAG‑TGAAAGGCAAAAAAACGGCCACCCg > 2:2504117/1‑150 (MQ=255) tCGATACCAGTTACATTTTCATATCCTTTCGTTTTTTTTCTTTTTAAAAATATAATTAAATTATTTTTTTTTAAATATCGATATAACT‑ATCAAAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGa < 1:3780146/150‑1 (MQ=255) tCGACACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATATTGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGa < 2:5308329/150‑1 (MQ=255) gATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATa < 2:4634055/150‑1 (MQ=255) aTACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAg < 2:6164945/150‑1 (MQ=255) cACGTAAATTTTAATATCCTGTCTTTTTTTTTCTTTTACAAAATATAATGAAATTATTTTTTTTTAAATATCTATATAACG‑ATAAAAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGaa < 1:923795/150‑1 (MQ=255) aCGTACTTTTTCATATCCTGTCGTTTTTTTTCTATTTCAAAATATAATTAAATTATTTTTTTTTAAATATCGATATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAg < 1:950257/150‑1 (MQ=255) aCGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACACTATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGGTAGGGAAg > 2:4940864/1‑150 (MQ=255) aCGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCCAAAAAAAGGCCTCCCGATAGGGAAg > 2:3700087/1‑150 (MQ=255) gTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTTTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGcc > 2:5221002/1‑150 (MQ=255) ctttttCATACCGTGTCTTTTTTTTTCTTTTACAAAATATATTGAAATTTTTTGTTTTTAAATATCTAGATAACG‑ATCAAAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCTTCCCTATCGGGAGGCCGtt < 1:6317052/148‑2 (MQ=255) cATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAACACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTa < 2:3189001/150‑1 (MQ=255) cATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTa < 2:821670/150‑1 (MQ=255) cATTTTCAAACCCGTTCTTTTTTTTTCTATTTAAAAATATATTAAAATTTTTTTTTTTAAAATATCTAGATAACG‑AACACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTa < 1:5511998/150‑1 (MQ=255) tCATATCCTGTCTTTTGTTTTCTATTTAAAAATATAATGAATTTATTTTTTTTTAAATATCTAGATAACG‑ATAAAAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCaaa < 1:3240808/150‑1 (MQ=255) cTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAAAATT‑AAAATTATTCGAGGAG‑TGAAATGCAAAAAAAACGCCACCCGATAGGGAAGCCGTATCAAAGTGcgcg > 2:339803/1‑150 (MQ=255) gtttgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 1:4680957/1‑150 (MQ=255) gtttgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGttt > 1:2113786/1‑150 (MQ=255) tttgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtttt > 1:1763883/1‑150 (MQ=255) tttgtttTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATAACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGtttt > 1:3007501/1‑150 (MQ=255) ttttCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATg > 2:4186330/1‑150 (MQ=255) ttttCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTGTTTATg > 1:4752257/1‑150 (MQ=255) cGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCgg > 2:4075693/1‑150 (MQ=255) tCAACAGATAATTAACTTATTTGTTTTTAAATATCGATATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCg < 1:4782752/150‑1 (MQ=255) tCAAAATATAATGAAATTATTTTTTTTTAAATATCGATATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCg < 1:5211632/150‑1 (MQ=255) tCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCg > 2:1526460/1‑150 (MQ=255) tCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCg > 1:461443/1‑150 (MQ=255) acAAAATATAATCAAATTATTTCTTTTAAAATACCGAGATACCC‑ATCACAAACACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACCGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCg < 2:2636/149‑1 (MQ=255) cAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCgg > 2:1998086/1‑150 (MQ=255) aaaaTATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgt > 1:1907687/1‑150 (MQ=255) aaaTATACTGACATTTTTTGTTTTTATATAGCGAGATCACG‑ATCACACCCACGACAATAGG‑AAAATTATTCGAGGAG‑TGAACGGCAAAACAACGGCCGCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtg < 2:3007501/150‑1 (MQ=255) aaTATACTGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAACACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtgt < 2:5147260/150‑1 (MQ=255) aaTATAATCAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGgtgt < 2:4304700/150‑1 (MQ=255) atatAATGAAATTATTTGTTTTTAAATATCGATATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTa < 2:2893307/150‑1 (MQ=255) ctaATGAAATTATTTGTTTTTAAATATCGCGATACCG‑ATCACAAAAACGACAATCTG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGAGCGGGAAGCCGTAGCAGAGTGCGCGTGTTATTATGCCGGATGCGGTGTaaa < 2:2164361/149‑1 (MQ=255) ataATTAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATGAAAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTaa < 2:2267803/150‑1 (MQ=255) taATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAAc > 1:3937193/1‑150 (MQ=255) aTGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACAt > 1:2225329/1‑150 (MQ=255) tGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATa > 2:141671/1‑150 (MQ=255) aaaTTATTTGTTTTTATATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAATGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACg > 1:1544778/1‑150 (MQ=255) aaTTATTTGTTTTTAAATATCTATATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGt < 1:4184807/150‑1 (MQ=255) aaTTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGt > 2:717295/1‑150 (MQ=255) ttattTGTTTTTAATTTTCGAGATAACG‑ATCTCAAATACGACTATATG‑ATAATTTTTCGAGGAG‑TGAAAGGCAAAAAATCGGCCTCCCGATTGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTTAACATACGTgg < 2:5823071/150‑1 (MQ=255) tattTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGc < 1:6479760/150‑1 (MQ=255) ttttttttTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAg < 1:1293552/150‑1 (MQ=255) ttttttttAAATATCGAGATAACT‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGC‑AAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTg < 2:2795851/147‑1 (MQ=255) tttttAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCt > 2:3555194/1‑150 (MQ=255) tttttAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCt > 2:3254863/1‑150 (MQ=255) tttAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTAt > 2:4239999/1‑150 (MQ=255) aaTATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAg < 2:6043863/150‑1 (MQ=255) tatCGAGATAACG‑ATCACCAAACCGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGc < 2:6330552/150‑1 (MQ=255) tatCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGc < 2:3055842/150‑1 (MQ=255) tatCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGc < 2:3154650/150‑1 (MQ=255) atCGAGATAACG‑ATCCCAAAAACGACCCTATG‑ACAGTTATTCGTGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGACGCCGTAGCATAGTGCGCGTGTTTTTATGCCGGATGCGGGGTCACCATCCGTGGCGGGGCGATGTGGGcg > 2:4698599/1‑149 (MQ=255) atCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCa > 1:1143154/1‑150 (MQ=255) atCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCa > 1:4991218/1‑150 (MQ=255) atCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCa > 2:4547062/1‑150 (MQ=255) tCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCAt > 1:6014789/1‑150 (MQ=255) agaTAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGAt > 2:4200876/1‑150 (MQ=255) aTAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATaa < 1:35542/150‑1 (MQ=255) aaCG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGa < 1:2327640/150‑1 (MQ=255) aCG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGAc > 2:5786807/1‑150 (MQ=255) cG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACg > 2:2465967/1‑150 (MQ=255) g‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGc > 2:5403781/1‑150 (MQ=255) g‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGc < 1:5275154/150‑1 (MQ=255) g‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGc > 1:6231262/1‑150 (MQ=255) aTCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGCt > 1:833864/1‑150 (MQ=255) | AATATTGAATGCCGGAACCGCATAACCGCCGCGCTGTGCGTTGTTCAGCATCTGCTTTGTCGATACCACGTACATTTTCATATCCTGTCGTTTGTTTTCGATTTCAAAATATAATGAAATTATTTGTTTTTAAATATCGAGATAACG‑ATCACAAAAACGACAATATG‑AAAATTATTCGAGGAG‑TGAAAGGCAAAAAAACGGCCTCCCGATAGGGAAGCCGTAGCAAAGTGCGCGTGTTTTTATGCCGGATGCGGTGTAAACATACGTGGCAGTGCTATGTAGGCATGATAAGACGCTTC > NC_000913/2177130‑2177428 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |