| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 164,581 | A→C | 17.5% | intergenic (+47/‑149) | hrpB → / → mrcB | putative ATP‑dependent helicase/fused glycosyl transferase and transpeptidase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 164,581 | 0 | A | C | 17.5% | 256.7 / 16.8 | 156 | intergenic (+47/‑149) | hrpB/mrcB | putative ATP‑dependent helicase/fused glycosyl transferase and transpeptidase |
| Reads supporting (aligned to +/- strand): ref base A (48/77); new base C (5/26); total (53/103) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.02e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 159 total aligned reads displayed.
CCGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGAGAAAAA > NC_000913/164432‑164727 | ccGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCa > 2:5980460/1‑150 (MQ=255) cGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCAt > 2:4098291/1‑150 (MQ=255) cGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCAt < 2:2070683/150‑1 (MQ=255) cGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGGAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCag > 2:3196010/1‑149 (MQ=255) tGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCa < 2:5979978/150‑1 (MQ=255) tGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCa < 2:341394/150‑1 (MQ=255) ggTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCCTCcgcg > 1:3011309/1‑150 (MQ=255) ggTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCcgcg > 1:6360588/1‑150 (MQ=255) ggTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAgcg > 1:6360501/1‑150 (MQ=255) gCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGTGAGGGCCGGGGTGAGGGCATCAgcgcgc > 2:2698516/1‑150 (MQ=255) cAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTCAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCCTCAGCGCGCa > 2:737013/1‑150 (MQ=255) aaaatGAGTTTAAAGGGCGTTATCCCAAACAGTTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAATTATTCGTATGGTTGGTTTTCTCCCTCTCCCTGTGGGTGAGGGCCGGGGTGAGGGCATCAGCGCGCAc < 2:1617199/150‑1 (MQ=37) aaaaaGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGTGGGCCGGGGTGAGGGCATCAGCGCGCAc < 2:1617303/150‑1 (MQ=255) aaaaGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTCTTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACg > 1:5678797/1‑150 (MQ=255) aaaaGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACg > 1:1882543/1‑150 (MQ=255) aaaaGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACg > 2:5210867/1‑150 (MQ=255) aaaaGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACg > 1:5324647/1‑150 (MQ=255) aaaGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGt > 1:1259459/1‑150 (MQ=255) agagATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGttg > 2:403777/1‑149 (MQ=255) agagATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGtgg > 1:2540762/1‑148 (MQ=255) agagATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGtgg > 1:3472026/1‑148 (MQ=255) agaTGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCCTCAGCGCGCACggggcc > 2:2052997/1‑145 (MQ=255) gAATGGGCTTTATCCAAAACTTGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGAGGAAAAAGTTTTGTTACGGTTGGTTTTCTCCCTCCCCCTTTGGGTTTGGGCCGGGGTTTGGGCATCAGCGCGCACGTt‑caccctc < 2:4661601/150‑1 (MQ=255) atggggGTTATCCAAAACTTGTCGGGCCGGACGACCCGGAAAATACGGCCCCGACGCGCCGCACGAAACTTTATTCGTACGGTTGTTTTTCTCCCTCCCCCTGTGGGAGTGGGCGGGGGTGTGGGCATCAGCGCGCACGTt‑caccctcac < 2:1312967/148‑1 (MQ=255) gTTATCCAAAACTTGTCTGGCGGCCCGCCCCGGAAAATCCTGCACCGAGGCGACGGAGTAAAATTTATTGGTCAGGTTGTTTTTCTCCGTCTCCGTGTGGTTGTGGGCGGGGGTGTGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAAc < 2:2447039/150‑1 (MQ=255) ttATCCCAACCTTGTCTGGCCGGACGCCCCGGCAAATACTCCACCGACGCGACGTACTAAAAAGTTTGCGTATGGTGGTTTTTCCCCACGGCCCTGTGGTAGTGGGCGGGGGTGCGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAAcc < 2:1950094/150‑1 (MQ=255) ccaaaaCTTGTCTGGCCGGACGACCCGGAAAATACTGCACCGCCGCGACGTACTAAAATTTTTTCTTATGTTTGTTTTTCTCCCTCTCCCTGTGGGTGAGGGCCGGGGTGCGGGCCTCAGCGCGCACGTT‑CACCCTCACCCTAACCctct < 1:5524488/147‑1 (MQ=25) ccaaaaCATGTCTGGCCGGACCACCGGTAAAATACGGCACCGACGCGACGGACTAAAAATTTTTCTTATGGTTGTTTTTCCCCCTCTCCCTGTGGGAGTGGGCGGGGGTGTGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCctct < 1:6015293/147‑1 (MQ=255) cAAACTTGTGGGGTCGGACGACCCGGAAAATCCTGCACCGACGCTACGTACTAAAAAGTATTCGTACGGTTGTTTTTCTCCCACTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTcc < 2:6268095/150‑1 (MQ=25) cAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTG‑GGCCCCCCCCCCAAcccacacc > 1:5368993/1‑145 (MQ=37) aaaCATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTT‑GGCCCGCACCCGTACCCTCTccc > 1:5458842/1‑150 (MQ=38) aaaCATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTT‑GACCCACACCCCAAaccacaacc > 1:817801/1‑144 (MQ=38) cttgtgtgGCCGGACTACCCAGAAAATACTGCAGCGCCGCGAGGGACGAAAATTTTTTCTTATTGTTGTTTTTCTCCCTCTCCCTGTGGTTGTGGGCGGGGGTGAGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCa < 2:3030649/148‑1 (MQ=25) ggCCGGACGACCCGGAAAATACTCCCCCCCCGCGCCGGACTAAAATGTTTCCTTACGGTTGTTTTTCCCCCACCCCCTGGGGGTGCGGGCGGGGGTGAGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGgaga < 1:1615824/150‑1 (MQ=255) gCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGTGAGGGCCGGGGTGCGGGCCTCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGagag < 2:4833101/150‑1 (MQ=255) gCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTG‑CACCCAAACCCCAAACCACACCCCCAAGGGggag > 2:2231233/1‑150 (MQ=37) ccGGACGCCCCGGCACAGCCGGCACCGCCGCGACGGACGAAAACGGATGCGCCCGGTGGGTTTTCGCGCTCACCCGGGGGGAGAGGGCGGGGGTGCGGGCCTCCGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTTGAGGGAGAgg < 2:5174586/150‑1 (MQ=255) cGGACGCCCCGGCAAAAACTGCACCGACGCGACGGACGAAAAAGTTTTCGTACGGTTGGTTTGCTCCCTCGCCCTGGGGGTGAGGGCCGGGGTGAGGCCCTCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTTGAGGGAGAggg < 2:6456070/150‑1 (MQ=255) ggACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCAGCAGCGCGCACGTG‑GGCCCCCACCCCCACCCAAACCCGCAAGGGGGAgggg > 2:3998738/1‑150 (MQ=25) acgacCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTACTCCCTCTCCCGGGGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGAc < 2:4966372/150‑1 (MQ=255) cgccccGGCAAACACCGCCCCGACGCGACGCACGAAACCGTATTCGCCTGGTTGGTTGTCGCCCCCTCCCTGGGGGAGTGGGCCGGGGGGAGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTTGAGGGAGAgggttag < 1:1384132/147‑5 (MQ=255) cgacCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTT‑GGCCCCCAACCCAAAACACACCCACAAGGGCGCGGGGGcc > 1:968795/1‑150 (MQ=25) cacCCGGAAAAAACTCCACCCACCCGACCAACCAAAAACTATACTAAAGGTTGCTTTACCCCCTCCCCCGGTGGCACAGGGCCGGGTTGCGGCCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCg < 2:723345/149‑1 (MQ=255) ccGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTT‑GACCCGCACCCCAAACCACACCCACCAGGGGGAGGGGGccccgc > 2:2974881/1‑146 (MQ=25) cgccAAATACGGCACCGCCGCGACGGCCGAAAAAGTATGCGTACGGTGGGTTTTCGCCCCCCCCCGGGGGGAGAGGGCGGGGGTGCGGGCCTCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCg < 2:3557927/147‑1 (MQ=255) cGGCAAATACTGCACCGACACGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTG‑CACCCCCCCCCAAAACCGCTCCCCCACCGGAGGGGGGccccctcg > 2:6015797/1‑145 (MQ=25) ggCAAATACTCCCCCGACGCGACGGACGAAAAATTATTCTTATGGTTGGTTTTCTCCCTCTCCCTGTGGGTGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGa < 1:5955182/150‑1 (MQ=38) gaaaaTCCGGCACCCACGCGAGGCAACAAAATTTATCCGTATGGTTGTTTTCCTCCCCCCCCCTGTGGGAGTGGGCGGGGGTGTGGGCCTCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAg < 1:879323/148‑1 (MQ=255) gCAAATCCTCCCCCGCCGCGCCGGACGAACACGTATGCGTCCGGTGGGTTGTCGCCCTCGCCCGGGGGGAGCGGGCGGGGGTGAGGGCCTCCGCGCGCCCGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAg < 1:5941704/150‑1 (MQ=255) gCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAg < 2:3784338/150‑1 (MQ=255) aaaTCCCGCACCGACGCGACGTCCTAAAACTTTTGCGTTGGTTTGTTTTTCCCCCCCCCCGGGGGGTTGCGGGCGGGGGTGCGGCCCTCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGca < 2:3003774/150‑1 (MQ=255) aTACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTG‑GACCCCCACCCCAACCCACACCCACAACGGAGAGGGGACCGAGCCCGcaca > 2:4695174/1‑150 (MQ=25) aTACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTG‑CCCCCACCCCCAAAACCACAACCACCACGGGGGGGGGTCCGATCGGGcacc > 2:1467884/1‑149 (MQ=21) aCTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCCGCGCGCACGGG‑CACCCCCACCCAAACCCCCACCCACAACGGGGGGGGGCCCCAACGAGGCCaaa > 1:4803146/1‑150 (MQ=21) cTGCACCGACGCGACGGCCGAAAAAGTATTCGTATGTTTGTTTTTCTCCCTCTCCGTGTGGTAGAGGGCGGGGGTGAGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAAt < 1:1528060/150‑1 (MQ=38) cTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCGTGTGGGTGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAAt < 2:2180870/150‑1 (MQ=255) cTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTG‑GCCCCGCACCCCAACCCACTACCGCACGGGGGAGGGGGCCGCGCGAGCCCAAAt > 1:1535442/1‑150 (MQ=25) cTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCAGCAGCGCGCACGTT‑GGCCCTCACCCAAAACCACTACCACAACGGGGGGGGGGCCGCTCGTGCCCaaaa > 1:2188483/1‑149 (MQ=25) cACCTAGGCGAGGGACTAAAATTTTTTCTTTTGTTTGTTTTCCCCCCTCTCGTTGTGGGTGTGGGCGGGGGTGCGGCCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAAtttt < 1:1901568/150‑1 (MQ=255) cACCTACGCGACGGACGAAAAATTATTCGTAAGTTTGGTTTTCTCCCTCACCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAAtttt < 2:5416555/150‑1 (MQ=255) cACCGACGCGCCGGCCGAACAGTTATGCGTCAGGTTGGTTTGCTCCCTCGCCCGGGGGGCGAGGGCCGGGGTGAGGGCCTCAGCGCGCCCGGT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAAtttt < 2:3500823/150‑1 (MQ=255) aCCGACGCGACGGACTAAAAAGTATTCTTACGGTTGTTTTTCTCCCTCACCCTGTGGGAGTGGGCCGGGGTGAGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTg < 1:892678/150‑1 (MQ=38) aCCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGGG‑CCCCCGCACCCCAACCCGCACCCGCCCGGGGGCGGGGACCGCTCGAGCCCAACTTTTg > 2:5486002/1‑150 (MQ=21) ccGACGCGCCGTACTAAAACGTATTCGTATGTTTGGTTTTCCCCCCCCCCCGGTGGGTGTGGGCGGGGGTGAGGGCCTCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTga < 1:1443152/150‑1 (MQ=255) ccGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGACATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTga < 1:1989526/150‑1 (MQ=255) gcgccgGACGAAAATGTATTGTTACGGTTGGTTTGCTCCCTCGCCGTGGGGGAGTGGGCGGGGGTGCGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGat < 2:5825965/150‑1 (MQ=255) gacggactAAAAAGTTTTCGTACGGGTGGTTTTCTCCCTCTCCCTGTGGGTGAGGGCGGGGGTGTGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGatat < 2:5678797/150‑1 (MQ=38) acggactAAAAATTATTCGTATGTTTGGTTTACTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCCTCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATAtc < 1:1431105/150‑1 (MQ=38) ggacgAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTT‑GACCCACACCCAAAACCACAACCCACACGGAGTGGGGGCCCCTCGAGCCCAAAAATTTGGAGatataat > 1:4181174/1‑147 (MQ=16) aaaatGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATAtcttcttct < 1:5488491/150‑1 (MQ=255) aaGTATTCGTAAGGTTGGGTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTc < 2:3728265/150‑1 (MQ=255) aaGTAGTCGTATGGTTGGTTTTCTCCCTCGCCCGGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTc < 2:4138329/150‑1 (MQ=255) ttgcGTATGGTTGTTTTTCTCCCCCGCCCTGGGGGAGCGGGCCGGGGTGTGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGt < 1:4580986/147‑1 (MQ=255) aTTCGTACGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGt < 1:3198334/150‑1 (MQ=255) aTTCGTAAGGTTGTTTTTCTCCCTCTCCCTGTGGGAGTGGGCCGGGGTGAGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGt < 2:6466486/150‑1 (MQ=255) tCGTAAGGTTGGTTTTCGCCCCCGCCGGGTGGGAGAGGGCGGGGGTGTGGGCCTCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTaa < 2:1394487/150‑1 (MQ=255) gttTTCACCCTCTCCCTGTGGGTGAGGGCCGGTGTGAGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAg < 1:3586154/150‑1 (MQ=255) cgtctccgtGGGGGTGTGGGCGGGGGTGCGGGCCTCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCgg < 1:4811693/148‑1 (MQ=255) cctctccctGTGGGTGAGGGCGGGGGTGGGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCgg < 2:6360588/150‑1 (MQ=255) cctctccctGTGGGAGAGGGCGGGGGTGAGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCgg < 1:3895175/150‑1 (MQ=255) ctctcccgGGGGGTGAGGGCCGGGGTGCGGGCCTCAGCGCGCACGTT‑CACCCTCACCCGAACCCTCGCCCTCAAGGGAGAGGGGACCGATCGAGCACACATTTTGAGCGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCggg < 2:918889/150‑1 (MQ=255) ctccctGTGGGAGAGGGCCGGGGTGAGGGCAGCCGCGCGCACGTT‑ACCCCACACCCCAAACCACACCCACAAGGGCGCGGGGGCCGCGCGAGCACAAAATTTGAGAGATATCATCATATCTCATGTAACAGAAGAACAGAAAAACGGGcg > 2:4021923/1‑149 (MQ=255) tccctGTGGGAGAGGGCCGGGGTGGGGGCATCAGCGCGCACGGG‑CACCCGCACCCAAACCCCCACCCCCCCGGGGGAGGGGGCCGAGCGAGCCCAAAATTTGAGAGATATATTCTTCTGGCTTTTAACCGAAGAACCGAAAATCGGGcat > 2:4397565/1‑148 (MQ=255) ccctGGGGGTGGGGGCGGGGGTGCGGGCCTCCGCGCGCCCGTT‑CACCCGCACCCGAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCttt < 1:2070001/150‑1 (MQ=255) tgtgGGAGCGGGCGGGGGTGAGGCCCTCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTgc < 1:843613/150‑1 (MQ=255) ggAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTG‑CACCCACACCCAAAACCACTACCACAAGGGGGAGGGGCCCGATCGAGCCCAAAATTTTAGAGATATCATCTTCTGTCTTGTAAAAGAAGGACACAAAAACGGGCTTTTGCGccg > 2:3240468/1‑149 (MQ=255) ggCCGGGGTGAGGGCATCAGCGCGCCCGTT‑CACCCGCACCCAAAAACACTCCCTACAGGGGGAGGGGCCCGAAAGAGCACAAAAATTGAGAGAAATAATAATCAGTATTGTAAAAGAATAACAGAAAAAAGGGCCTTTTCGCCAGAatat > 2:4243546/1‑150 (MQ=255) ggCCGGGGTGAGGGCATCAGCGCGCACGTTGCACCC‑CACCCCAACCCACAACCACAACGGGGGGGGGGCCCCTCGAGCCCAAAAATTTTTAGTTATATTATTATGTCTTTTTAAAAAAAAAAAAAAAAAAGGGCTTTTTCGCCGGAaaat > 2:1330541/1‑150 (MQ=255) ggCCGGGGTGAGGGCATCAGCGCGCACGTT‑CACCCGCACCCAAAACCACACCCACCACGGCGAGGGGCCCCATCGACCACAAAAATTGAGAGATATATTAATAAGTCTTGTAACACAAGAAAACAAAAACAGGCGTTTTCGCCCGAaaat > 2:5908138/1‑150 (MQ=255) ccGGGGTGCGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCGCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTg < 2:5139178/150‑1 (MQ=255) ccGGGGTGAGGCCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTg < 1:2875238/150‑1 (MQ=255) cGGGGTGAGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGc < 1:2689992/150‑1 (MQ=255) cGGGGTGAGGCCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGc < 1:291181/150‑1 (MQ=255) ggggTGAGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCg < 1:397472/150‑1 (MQ=255) ggTGAGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGga < 1:403777/150‑1 (MQ=255) gTGAGGGCATCAGCGCGCACGTT‑CACCCTCAACCTAAACCACTCCCTCAAGGGAGAGGGGACCGATCGAGAACAAAATTTGAGATATATCTTATTCTGTCTTGTAACAGAAGAACAGAAAATAGGGCTTTTTCGCCGGAATATTTCGgag > 2:1573620/1‑150 (MQ=255) tGAGGGCCTCAGCGCGCACGCT‑CACCCTCACCCTACCCCTCTCCCTCAAGGGAGAGGGGACCGCTCGAGCACAACTTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGgaga < 2:5349801/150‑1 (MQ=255) aGGGCCTCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGAGaaa < 1:5150054/150‑1 (MQ=255) aGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGATGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGAGaaa < 1:5514012/150‑1 (MQ=255) aGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGAGaaa < 1:3181593/150‑1 (MQ=255) | CCGTGAGGTGCAAAAAGAGATGAAAGGGCGTTATCCCAAACATGTCTGGCCGGACGACCCGGCAAATACTGCACCGACGCGACGGACGAAAAAGTATTCGTAAGGTTGGTTTTCTCCCTCTCCCTGTGGGAGAGGGCCGGGGTGAGGGCATCAGCGCGCACGTT‑CACCCTCACCCTAACCCTCTCCCTCAAGGGAGAGGGGACCGATCGAGCACAAATTTTGAGAGATATCTTCTTCTGTCTTGTAACAGAAGAACAGAAAATCGGGCTTTTGCGCCTGAATATTGCGGAGAAAAA > NC_000913/164432‑164727 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |