New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 374930 =NA (NA)9 (0.150) 3/170 NT 13.6% noncoding (1/436 nt) REP31 (repetitive extragenic palindromic) element; contains 9 REP sequences REP31 (repetitive extragenic palindromic) element; contains 9 REP sequences
?NC_000913 377522 = 63 (0.960)intergenic (+211/+13) yaiL/frmB DUF2058 family protein/S‑formylglutathione hydrolase

Only 100 of 124 total aligned reads displayed.

AAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCT  >  NC_000913/377384‑377653
                                                                                                                                          |                                                                                                                                   
tccgtaggccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcagacctacaaattctcacgccatccgtaggccggataaggcgttcacgccgcatccggcAg                                                                                                                                    <  1:83020‑M2/2‑1 (MQ=255)
tccgtaggccggataaggcgttcacgccgcatccggcagtcgtgcgcagatacctgatgcgacgctaacgcgtcttatcagacctacaaattctcccgccatccgtaggccggataaggcgttcacgccgcatccggcAg                                                                                                                                    <  1:748951‑M2/2‑1 (MQ=255)
accgccggccggccaacgcgttcacgccgcctccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcagacctacaaattctcacgccatccgtaggccggataaggcgttcacgccgcatccggcAg                                                                                                                                    <  1:1532233‑M2/2‑1 (MQ=255)
aaGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAg                                                                                                                                    >  1:698681/1‑140 (MQ=255)
 ccgtaggccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcagacctacaaattctcacgccatccgtaggccggataaggcgttcacgccgcatccggcAGt                                                                                                                                   <  2:669820‑M2/3‑1 (MQ=255)
 ccgtaggccggataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcagacctacaaattctcacgccatccgtaggccggataaggcgttcacgccgcatccggcAGt                                                                                                                                   <  2:669568‑M2/3‑1 (MQ=255)
  gtgtAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTc                                                                                                                                  <  1:714494/140‑1 (MQ=255)
  gtgtAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGAGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTc                                                                                                                                  <  1:559724/140‑1 (MQ=255)
     tAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTg                                                                                                                               <  1:1072030/140‑1 (MQ=255)
     aggccggacaacgcctgcaccccgcatccggcagtcgtgcgcagatgcctgatgcgacgcaaacgcgtcttaacagacctacaacttcccccgccatccgtaggccggataaggcgttcacgccgcatccggcAGTCGTg                                                                                                                               <  2:109972‑M2/7‑1 (MQ=255)
        aCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCta                                                                                                                            >  1:467174/1‑140 (MQ=255)
          ccggacaagacgtttatcgcatccggcagtcgtgtgcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttCACGCCGCATCCGGCAGTCGTGCtatt                                                                                                                          >  1:1373335‑M2/114‑140 (MQ=255)
            ataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcagacctacaaattctcacgccatccgtaggccggataaggcgttcacgccgcatccggcAGTc                                                                                                                                  <  1:745410‑M2/4‑1 (MQ=255)
            ataaggcgttcacgccgcatccggcagtcgtgcgcagatgcctgatgcgacgctaacgcgtcttatcagacctacaaattctcacgccatccgtaggccggataaggcgttcacgccgcatccggcAGTc                                                                                                                                  >  2:745410‑M2/127‑130 (MQ=255)
             aTAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATc                                                                                                                       >  1:1359372/1‑140 (MQ=255)
             aTAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATc                                                                                                                       >  1:657099/1‑140 (MQ=255)
             aTAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATc                                                                                                                       >  1:1220605/1‑140 (MQ=255)
             aTAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATc                                                                                                                       >  1:287517/1‑140 (MQ=255)
             aTAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGGGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATc                                                                                                                       >  2:668162/1‑140 (MQ=255)
               caagacgtttatcgcatccggcagtcgtgtgcagatgcctgatgcgacgctaacgcgtcttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttCACGCCGCATCCGGCAGTCGTGCTATTATCaa                                                                                                                     <  1:1394615‑M2/32‑1 (MQ=255)
                     ttCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCata                                                                                                               <  2:937037/140‑1 (MQ=255)
                       cACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATAtt                                                                                                             >  1:247244/1‑140 (MQ=255)
                       cACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATAtt                                                                                                             <  1:1576488/140‑1 (MQ=255)
                       cACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATAtt                                                                                                             >  1:184756/1‑140 (MQ=255)
                            cgcATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGtt                                                                                                        >  1:1319862/1‑140 (MQ=255)
                              cATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTa                                                                                                      >  1:459246/1‑140 (MQ=255)
                                 gcGGCTGTCTTGGGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTg                                                                                                   <  2:227910/139‑1 (MQ=255)
                                      aGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTg                                                                                              <  1:530487/140‑1 (MQ=255)
                                              gcCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCTTATTCAGTTTATTGGCGTGGTAGGCaa                                                                                      >  2:1181849/1‑140 (MQ=255)
                                              gcCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCaa                                                                                      >  1:630226/1‑140 (MQ=255)
                                              gcCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCaa                                                                                      >  1:631254/1‑140 (MQ=255)
                                                 aTGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGACGTGTAGGCCGGATATGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAatat                                                                                   >  2:309227/1‑140 (MQ=255)
                                                 aTGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAatat                                                                                   >  2:309127/1‑140 (MQ=255)
                                                  tGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGc                                                                                 >  1:983809/1‑140 (MQ=255)
                                                  tGCCTGATGCGACGCTGTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCCATATg                                                                                  >  2:1547042/1‑140 (MQ=255)
                                                     cTGATGTGACGCTTAGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATAGTCAGTTTCTTGGCGTGGTAGGCAATATGCTc                                                                               <  2:470023/140‑1 (MQ=255)
                                                       gATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGt                                                                                                                                >  1:217097/1‑89 (MQ=255)
                                                       gATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGt                                                                                                                                <  2:217097/89‑1 (MQ=255)
                                                        aTGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGcc                                                                            >  2:1197099/1‑140 (MQ=255)
                                                        aTGCGACGCTTTGCGCGTCTTAGCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGcc                                                                            >  2:1463266/1‑140 (MQ=255)
                                                          gCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCaa                                                                          >  1:1649102/1‑140 (MQ=255)
                                                                       gtcttatcagacctacaaattctcacgccatccgtaggccggataaggcgttcacgccgcatccggcAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGAc                                                             <  2:614245‑M2/73‑1 (MQ=255)
                                                                         tCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACaa                                                           <  2:110005/140‑1 (MQ=255)
                                                                         cttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttCACGCCGCATCCGGCAGTCGt                                                                                                                                >  1:1478772‑M2/51‑71 (MQ=255)
                                                                          ttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttCACGCCGCATCCGGCAGTCg                                                                                                                                 <  2:356243‑M2/20‑1 (MQ=255)
                                                                          ttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttCACGCCGCATCCGGCAGTCg                                                                                                                                 >  1:356243‑M2/50‑69 (MQ=255)
                                                                          ttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttCACGCCGCATCCGGCAGTCGt                                                                                                                                >  1:1359917‑M2/50‑70 (MQ=255)
                                                                          ttatcaggcctacaaattcccgcgccatccgtaggccggataaggcgttCACGCCGCATCCGGCAGTCGt                                                                                                                                <  2:1359917‑M2/21‑1 (MQ=255)
                                                                          ttatcagacctacaaattctcacgccatccgtaggccggataaggcgttcacgccgcatccggcAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCTCCAATAAAACTGGAGACaaa                                                          >  2:1155148‑M2/65‑140 (MQ=255)
                                                                          ttatcagacctacaaattctcacgccatccgtaggccggataaggcgttcacgccgcatccggcAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACaaa                                                          >  2:782392‑M2/65‑140 (MQ=255)
                                                                          ttatcagacctacaaattctcacgccatccgtaggccggataaggcgttcacgccgcatccggcAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACaaa                                                          >  2:1665230‑M2/65‑140 (MQ=255)
                                                                          ttatcagacctacaaattctcacgccatccgtaggccggataaggcgttcacgccgcatccggcAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACaaa                                                          >  2:781552‑M2/65‑140 (MQ=255)
                                                                          ttatcagacctacaaattctcacgccatccgtaggccggataaggcgttcacgccgcatccggcAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACaaa                                                          >  2:399226‑M2/65‑140 (MQ=255)
                                                                          ttatcagacctacaaattctcacgccatccgtaggccggataaggcgttcacgccgcatccggcAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACaaa                                                          >  2:1691039‑M2/65‑140 (MQ=255)
                                                                          cTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACaaa                                                          >  1:9355/1‑140 (MQ=255)
                                                                           ttATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACaaaa                                                         >  1:384638/1‑140 (MQ=255)
                                                                            tATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAaat                                                        <  2:299735/140‑1 (MQ=255)
                                                                              tCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAaataa                                                      <  1:528244/140‑1 (MQ=255)
                                                                               cAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAaataat                                                     >  2:1412607/1‑140 (MQ=255)
                                                                               cAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAaagaat                                                     >  2:1638978/1‑140 (MQ=255)
                                                                                  gCCTACGGCTTACGTGCGAAGTGTAGGCCGGATAAGTCGTACACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTTGTAGTCAATATGCTCGCCAAAAAAACAGGAGACAAAATAAAAga                                                  >  1:739558/1‑139 (MQ=37)
                                                                                  gCCTACGGCTTACGTGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGc                                                  >  1:1241614/1‑140 (MQ=255)
                                                                                  gCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGc                                                  >  2:148789/1‑140 (MQ=255)
                                                                                   ctacaaattcccgcgccatccgtaggccggataaggcgttCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCt                                                 <  2:1175059‑M2/100‑1 (MQ=255)
                                                                                   ccTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCt                                                 <  1:4573/140‑1 (MQ=255)
                                                                                    cTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCtg                                                <  1:857281/140‑1 (MQ=255)
                                                                                     tACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCtgt                                               <  2:213892/140‑1 (MQ=255)
                                                                                      aCGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCtgtg                                              >  1:952204/1‑140 (MQ=255)
                                                                                      aCGGCTTACGGGCGAAGGGTAGCCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCAATTATCAACGCAAATTCAGTTTATTGCCGTGGTAGGCAATATGCTCGCAAAAAACACTAGAGACAAAATAATAGCagtt                                              >  2:1504691/1‑139 (MQ=25)
                                                                                       cGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGa                                             >  2:696869/1‑140 (MQ=255)
                                                                                       cGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGa                                             >  2:235261/1‑140 (MQ=255)
                                                                                          cTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCa                                          <  1:735797/140‑1 (MQ=255)
                                                                                           tctcacgccatccgtaggccggataaggcgttcacgccgcatccggcAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCAt                                         >  2:762‑M2/48‑140 (MQ=255)
                                                                                            tACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATa                                        >  2:1006025/1‑140 (MQ=255)
                                                                                            tACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATa                                        >  1:1441114/1‑140 (MQ=255)
                                                                                            tACGGGCGAAGGGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATa                                        >  2:1652152/1‑140 (MQ=255)
                                                                                              cGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAAc                                      >  2:1126041/1‑140 (MQ=255)
                                                                                              cGGGCGAAGAGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAAc                                      >  2:178368/1‑140 (MQ=255)
                                                                                                cgccatccgtaggccggataaggcgttCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAAccc                                    >  2:1257829‑M2/28‑140 (MQ=255)
                                                                                                cgccatccgtaggccggataaggcgttCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAAccc                                    >  2:41046‑M2/28‑140 (MQ=255)
                                                                                                    aaGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTgg                                                                 >  1:1568433/1‑107 (MQ=255)
                                                                                                    aaGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTgg                                                                 <  2:1568433/107‑1 (MQ=255)
                                                                                                         taggccggataaggcgttCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATaa                           <  1:740913‑M2/122‑1 (MQ=255)
                                                                                                         taggccggataaggcgttCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATaa                           <  2:643967‑M2/122‑1 (MQ=255)
                                                                                                             ccggataaggcgttCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGa                       >  1:593730‑M2/15‑140 (MQ=255)
                                                                                                                gataaggcgttCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTa                    <  2:1590307‑M2/129‑1 (MQ=255)
                                                                                                                gataaggcgttCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAACAGCTGTGATCATAACCCTCGTGATAACGGATTa                    <  2:1590320‑M2/129‑1 (MQ=255)
                                                                                                                 ataaggcgttCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGTTCATAACCCTCGTGATAACGGCTTaa                   >  2:875181‑M2/11‑140 (MQ=255)
                                                                                                                 ataaggcgttCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACTGATTaa                   >  1:934775‑M2/11‑140 (MQ=255)
                                                                                                                 ataaggcgttCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTaa                   >  1:935542‑M2/11‑140 (MQ=255)
                                                                                                                 ataaggcgttCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTaa                   >  1:1284782‑M2/11‑140 (MQ=255)
                                                                                                                 ataaggcgttCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATAAGCTCGCCAATAAAACTGGAGACAATATAATAGCTGTGATCATAACCCTCGTGATAACGGATTaa                   >  2:876736‑M2/11‑140 (MQ=255)
                                                                                                                     ggcgttCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTc               <  2:1459933‑M2/134‑1 (MQ=255)
                                                                                                                      gcgttCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCt              <  2:1251197‑M2/135‑1 (MQ=255)
                                                                                                                      gcgttCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCt              <  2:1251384‑M2/135‑1 (MQ=255)
                                                                                                                             ctccgcATCCGTCATTCGTGATATTATCAAAGCATATTCAGTTTATTTGCGTGGTAGTCAATATGCTCGCCAATAAAACTGGAGACAAAATAATATATTTTATAATAACCCTCGTGATAACGGATTAACTTATTgttttt       <  1:1475860/138‑6 (MQ=255)
                                                                                                                                cgcatccggcAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCAt    <  2:869914‑M2/130‑1 (MQ=255)
                                                                                                                                 gcatccggcAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAAGAATAGATGTGATCATAACCCTCGTGATAACGGTTTAACGTCTTGTTATTAAtc   >  2:1424780‑M2/10‑140 (MQ=255)
                                                                                                                                 gcatccggcAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAAATGGAGACAAAATAATAGCTGTGATCATAACCCTCTTGATAACGGATTAACGTCTTGATATTCAtc   >  2:1542248‑M2/10‑140 (MQ=255)
                                                                                                                                  catccggcAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCAtct  <  1:551396‑M2/132‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                   
AAGTGTAGACCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCGCCATGCCTGATGCGACGCTTTGCGCGTCTTATCAGGCCTACGGCTTACGGGCGAAGTGTAGGCCGGATAAGGCGTTCACGCCGCATCCGGCAGTCGTGCTATTATCAACGCATATTCAGTTTATTGGCGTGGTAGGCAATATGCTCGCCAATAAAACTGGAGACAAAATAATAGCTGTGATCATAACCCTCGTGATAACGGATTAACGTCTTGATATTCATCT  >  NC_000913/377384‑377653

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.