BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	566098 =	75 (0.840)	10 (0.130) +GAGAGGAGGATTACAAA	5/222	NT	9.4%	pseudogene (279/279 nt)	exoD	pseudogene, DLP12 prophage; phage‑type exonuclease family;Phage or Prophage Related
*	?	NC_000913	4397412 =	147 (1.640)	10 (0.130) +GAGAGGAGGATTACAAA	5/222	NT	9.4%	coding (1/1848 nt)	mutL	methyl‑directed mismatch repair protein

Only 100 of 169 total aligned reads displayed.

CTGGCAGAAGCCATTTACAAAGGCCTGCGCAATTACTTCCTTGCGCATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCGA  >  NC_000913/4397274‑4397551

cTGGCAGAAGCCATTTACAAAGGCCTGCGCAATTACTTCCTTGCGCATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGAt                                                                                                                                            >  1:27087/1‑140 (MQ=255)

  ggCAGAAGCCATTTACAAAGGCCTGCGCAATTACTTCCTTGCGCATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGc                                                                                                                                          <  1:184615/140‑1 (MQ=255)

       aaGCCATTTACAAAGGCCTGCGCAATTACTTCCTTGCGCATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAAtt                                                                                                                                     <  1:359288/140‑1 (MQ=255)

             tttACAAAGTCCTGCGCAATAACTAACTTGCGCATCCGATGCAATCTGCGACGAAGGGTGCAACGGCACAAACTGCCAGAACGGTGACCACGACAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATACAGGTc                                                                                                                               >  1:443615/1‑140 (MQ=255)

             tttACAAAGGCCTGCGCAATTACTTCCTTGCGCATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTc                                                                                                                               >  2:1609882/1‑140 (MQ=255)

                    agtacatggcgagttttgacgagatcgtgccggagttcatcgaaaaaatggacgaggcactggctgaaattggttttgtatttggggagcaatggcgatgagagaggaggattacaaaATGCCAATTCAGGTCTTACCGc                                                                                                                        <  1:501211‑M2/22‑1 (MQ=255)

                    aGGCCTGCGCAATTACTTCCTTGCGCATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGc                                                                                                                        >  2:880265/1‑140 (MQ=255)

                    aGGCCTGCGCAATTACTTCCTTGCGCATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGc                                                                                                                        >  1:1172531/1‑140 (MQ=255)

                    aGGCCTGCGCAATTACTTCCTTGCGCATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGc                                                                                                                        >  1:738250/1‑140 (MQ=255)

                                ttACTTCCTTGCGCATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTCAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGa                                                                                                            >  2:1683348/1‑140 (MQ=255)

                                ttACTTCCTTGCGCATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGa                                                                                                            >  1:99332/1‑140 (MQ=255)

                                ttACTTCCTTGCGCATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGa                                                                                                            >  2:1131939/1‑140 (MQ=255)

                                ttACTTCCTTGCGCATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGa                                                                                                            >  2:1470302/1‑140 (MQ=255)

                                ttACTTCCTTGCGCATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGa                                                                                                            >  1:1077235/1‑140 (MQ=255)

                                ttACTTCCTTGCGCATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGa                                                                                                            >  2:596947/1‑140 (MQ=255)

                                ttACTTCATTGCGCATCCGATGCTATCTGCGCCGCTGGGTGCAACGGCAAAAACTTCCAGTACGGTGACGACGCCACATCGCACGCTGCCAAACTAAGGACGATTGATTCCAATTCAGGTCTTACCCCAACAACTGGCGa                                                                                                            >  2:848774/1‑140 (MQ=255)

                                gttttgacgagatcgtgccggagttcatcgaaaaaatggacgaggcactggctgaaattggttttgtatttggggagcaatggcgatgagagaggaggattacaaaATGCCAATTCAGGTCTTACCGCCACAACTGGCGa                                                                                                            >  1:895783‑M2/107‑140 (MQ=255)

                                gttttgacgagatcgtgccggagttcatcgaaaaaatggacgaggcactggctgaaattggttttgtatttggggagcaatggcgatgagagaggaggattacaaaATGCCAATTCAGGTCTTACCGCCACAACTGGCGa                                                                                                            >  1:1015384‑M2/107‑140 (MQ=255)

                                gttttgacgagatcgtgccggagttcatcgaaaaaatggacgaggcactggctgaaattggttttgtatttggggagcaatggcgatgagagaggaggattacaaaATGCCAATTCAGGTCTTACCGCCACAACTGGCGa                                                                                                            >  1:286109‑M2/107‑140 (MQ=255)

                                gttttgacgagatcgtgccggagttcatcgaaaaaatggacgaggcactggctgaaattggttttgtatttggggagcaatggcgatgagagaggaggattacaaaATGCCAATTCAGGTCTTACCGCCACAACTGGCGa                                                                                                            >  1:1593104‑M2/107‑140 (MQ=255)

                                gttttgacgagatcgtgccggagttcatcgaaaaaatggacgaggcactggctgaaattggttttgtatttggggagcaatggcgatgagagaggaggattacaaaATGCCAATTCAGGTCTTACCGCCACAACTGGCGa                                                                                                            >  1:1015330‑M2/107‑140 (MQ=255)

                                  aCTTCCTTGCGCATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAAc                                                                                                          <  2:1166820/140‑1 (MQ=255)

                                     tCCTTGCGCATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAg                                                                                                       >  1:132975/1‑140 (MQ=255)

                                       cTTGCGCATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGAt                                                                                                     <  2:972137/140‑1 (MQ=255)

                                       cTTGCGCATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGAt                                                                                                     <  2:1625960/140‑1 (MQ=255)

                                        ttGCGCATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGAtt                                                                                                    >  2:345022/1‑140 (MQ=255)

                                          gcgcATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGc                                                                                                  >  2:1427611/1‑140 (MQ=255)

                                          gcgcATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGc                                                                                                  >  1:104838/1‑140 (MQ=255)

                                          gcgcATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGc                                                                                                  >  2:692607/1‑140 (MQ=255)

                                          gcgcATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGc                                                                                                  >  2:542925/1‑140 (MQ=255)

                                          gcgcATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGc                                                                                                  <  2:418661/140‑1 (MQ=255)

                                          gcgcATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGc                                                                                                  <  2:418499/140‑1 (MQ=255)

                                          gcgcATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGc                                                                                                  >  1:587888/1‑140 (MQ=255)

                                          gcgcATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGc                                                                                                  >  1:23896/1‑140 (MQ=255)

                                            gcATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCg                                                                                                <  1:948951/140‑1 (MQ=255)

                                              aTCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCa                                                                                              >  2:865227/1‑140 (MQ=255)

                                                ccGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGCTTGCCGCagg                                                                                            <  2:620488/140‑1 (MQ=255)

                                                  gATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCaggtg                                                                                          <  1:1561332/140‑1 (MQ=255)

                                                       aaTCTGCGCCGCTGGGTGCAACGGCACAATCTGCCAGTTCGGTGACGACGCCAGTTCGCTCGCTGCCAAACTTAGGTCGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCaggtgaggtg                                                                                     <  2:515872/140‑1 (MQ=255)

                                                       aaTCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCaggtgaggtg                                                                                     <  2:1306684/140‑1 (MQ=255)

                                                       aaTCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCaggtgaggtg                                                                                     <  2:1535910/140‑1 (MQ=255)

                                                             cgccgcAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAg                                                                               >  1:817722/1‑140 (MQ=255)

                                                             cgccgcAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAg                                                                               <  1:1059485/140‑1 (MQ=255)

                                                             cgccgcAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAg                                                                               >  1:1560655/1‑140 (MQ=255)

                                                                  cAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGAcc                                                                          <  1:1300964/140‑1 (MQ=255)

                                                                          aaCGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCgg                                                                  >  1:987384/1‑140 (MQ=255)

                                                                          aaCGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCgg                                                                  >  1:987777/1‑140 (MQ=255)

                                                                           aCGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGt                                                                 <  1:1680768/140‑1 (MQ=255)

                                                                            cGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTa                                                                >  1:1592965/1‑140 (MQ=255)

                                                                                acaAACTGCCATTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATAGATGCCAATTCAGGTCTTACCGGCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGTCCTGGGTCGGTAGTCa                                                            >  1:906374/1‑140 (MQ=255)

                                                                                 caAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCaa                                                           >  2:530004/1‑140 (MQ=255)

                                                                                 caAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCaa                                                           <  2:689155/140‑1 (MQ=255)

                                                                                 caAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCaa                                                           >  1:1079403/1‑140 (MQ=255)

                                                                                 caAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCaa                                                           >  1:357886/1‑140 (MQ=255)

                                                                                 caAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCaa                                                           >  1:125896/1‑140 (MQ=255)

                                                                                 caAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCaa                                                           >  1:754331/1‑140 (MQ=255)

                                                                                 caAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCaa                                                           >  1:742502/1‑140 (MQ=255)

                                                                                 caAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCaa                                                           >  1:125860/1‑140 (MQ=255)

                                                                                        ccAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTa                                                    >  1:1115673/1‑140 (MQ=255)

                                                                                         cAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAg                                                   >  2:314697/1‑140 (MQ=255)

                                                                                            tACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTgg                                                >  2:332512/1‑140 (MQ=255)

                                                                                                gTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCTATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTAGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGaaaa                                            <  2:773278/140‑1 (MQ=255)

                                                                                                gTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGaaaa                                            >  2:1148486/1‑140 (MQ=255)

                                                                                                gTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGaaaa                                            <  1:1657503/140‑1 (MQ=255)

                                                                                                gTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGaaaa                                            <  1:143821/140‑1 (MQ=255)

                                                                                                gTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGaaaa                                            <  2:378491/140‑1 (MQ=255)

                                                                                                   acgacgCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAg                                         >  2:109824/1‑140 (MQ=255)

                                                                                                      acgCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCATAGAACTAGTGGAAAACAGCCt                                      <  2:822854/140‑1 (MQ=255)

                                                                                                      acgCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCt                                      >  1:375076/1‑140 (MQ=255)

                                                                                                      acgCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCt                                      >  1:871537/1‑140 (MQ=255)

                                                                                                      acgCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCt                                      <  1:1176639/140‑1 (MQ=255)

                                                                                                         ccAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGa                                   <  2:1462741/140‑1 (MQ=255)

                                                                                                         ccAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGa                                   <  2:1462629/140‑1 (MQ=255)

                                                                                                            gcattggcgatgagagaggaggattacaaaATGCCAATTCAGGTCTTACCGCCACAACTTGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGAAAAACAGCCTCGATGc                                <  1:1235413‑M2/110‑1 (MQ=255)

                                                                                                                 cACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTg                           >  1:571652/1‑140 (MQ=255)

                                                                                                                 cACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTg                           >  1:570581/1‑140 (MQ=255)

                                                                                                                  aCGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCTAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGc                          >  2:569821/1‑140 (MQ=255)

                                                                                                                  aCGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGAGTGCCGCAGGGGAGGTGGTCGAGCGACCTGCGGCGGTAGTCACAGACCGAGTGGAAAACAGCCTCGATGCAGGTGc                          >  2:699449/1‑140 (MQ=255)

                                                                                                                      tGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGAcg                      <  1:321093/140‑1 (MQ=255)

                                                                                                                      tGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGAcg                      <  2:642240/140‑1 (MQ=255)

                                                                                                                      tGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGAcg                      <  1:895954/140‑1 (MQ=255)

                                                                                                                          aaaCTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTa                  <  1:843993/140‑1 (MQ=255)

                                                                                                                            aCTAAGGACGTATGAAGCCAATTCAGGTCTTACCGCCACAACAGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATc                <  2:1680187/140‑1 (MQ=255)

                                                                                                                            aCTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATc                <  2:752093/140‑1 (MQ=255)

                                                                                                                            aCTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATc                <  2:668668/140‑1 (MQ=255)

                                                                                                                            aCTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATc                <  2:1196936/140‑1 (MQ=255)

                                                                                                                            aCTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATc                <  2:511528/140‑1 (MQ=255)

                                                                                                                              tAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGa              >  1:300943/1‑140 (MQ=255)

                                                                                                                              tAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGa              <  2:1533605/140‑1 (MQ=255)

                                                                                                                                aGGACGATTGATGCCATTTCAGGTCTTACCGACACAACTGGCGAACCAGATTGCCGCAGGTCAGGTGGTCGAGCGACCTGCGTCGGTAGTCCATGAACTAGTGGAAAACAGCCACGATGCAGGTGCGACGCGTATCGatc            >  2:1429532/1‑139 (MQ=255)

                                                                                                                                aGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGata            >  2:297886/1‑140 (MQ=255)

                                                                                                                                aGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGata            <  1:109824/140‑1 (MQ=255)

                                                                                                                                aGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGata            >  2:1134863/1‑140 (MQ=255)

                                                                                                                                aGGACGATTGATGACAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCTCAGGTGAGGTGGTCGAGCTACCTGCGTCGGTAGTCAAATAACTATTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGata            >  2:777899/1‑140 (MQ=255)

                                                                                                                                  gACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATAtt          >  2:720394/1‑140 (MQ=255)

                                                                                                                                  gACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATAtt          >  1:1145393/1‑140 (MQ=255)

                                                                                                                                      aTTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGata      >  1:428226/1‑140 (MQ=255)

                                                                                                                                         aATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGAAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCg   >  2:1330047‑M2/2‑140 (MQ=255)

                                                                                                                                          aTGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCGa  >  2:1371834/1‑140 (MQ=255)

                                                                                                                                          aTGCCAAATCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCGa  >  2:1594159/1‑140 (MQ=255)

CTGGCAGAAGCCATTTACAAAGGCCTGCGCAATTACTTCCTTGCGCATCCGATGCAATCTGCGCCGCAGGGTGCAACGGCACAAACTGCCAGTACGGTGACGACGCCAGATCGCACGCTGCCAAACTAAGGACGATTGATGCCAATTCAGGTCTTACCGCCACAACTGGCGAACCAGATTGCCGCAGGTGAGGTGGTCGAGCGACCTGCGTCGGTAGTCAAAGAACTAGTGGAAAACAGCCTCGATGCAGGTGCGACGCGTATCGATATTGATATCGA  >  NC_000913/4397274‑4397551

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.