| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 4,567,347 | C→A | 6.6% | L391L (CTG→CTT) | mdtM ← | multidrug efflux system protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 4,567,347 | 0 | C | A | 6.6% | 275.7 / 5.3 | 91 | L391L (CTG→CTT) | mdtM | multidrug efflux system protein |
| Reads supporting (aligned to +/- strand): ref base C (39/45); new base A (4/3); total (43/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
ACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCGACCGAGACCGACATCACCATCAGGATCACCATATTTAGCGATGCGGAGA > NC_000913/4567210‑4567486 | aCCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTACTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAg > 1:900210/1‑140 (MQ=255) ttGGCGCGTCTGAGTTCGATGATTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATAACAGCTCCACCACTAGCTCGGCTGCCTGATTCTGGCGCACGCGATTGAGCAATCCCCCCAGGGTGa > 1:1392725/1‑140 (MQ=255) ttGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGa > 1:1112423/1‑140 (MQ=255) tGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGaa > 2:368115/1‑140 (MQ=255) gcgTCTGATTTCGATTATTTTATACATAACGTTAAGAATAGAGCCTGACGGCCGGAACGCGCAAAAATCACTGCTCCACCACTAGCTCGGCTGCCTTATGCTGGCGCACGCGATTGACAAATCCCGCCAGGGTGAAAacg < 1:1244082/140‑1 (MQ=255) gcgTCTGAGTTCGATGAGTTTATACATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGTTGAAAacg < 1:1244061/140‑1 (MQ=255) gcgTATTAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGGGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAacg < 2:710806/140‑1 (MQ=255) gTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAacgac > 2:1395128/1‑140 (MQ=255) gTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAacgac > 2:518121/1‑140 (MQ=255) tCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAacgacg > 1:608294/1‑140 (MQ=255) ttCGATGTGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACCAGCTCGGCTGCCTGTTGCTGGCGCACGCGATTGAGCAAGCCCGCCAGGGTGAAAACGACGATAAcg < 1:1472617/140‑1 (MQ=255) ttCGATGAGTTTATTCATACCGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAAcg < 1:1473283/140‑1 (MQ=255) ttCGATGAGTTTATTCAGAACGTTAAGATTAGTGCCTGACGGCCGTATCGCGCATAATACACTGCTCCTCCACTCGCTCGGCTGCGTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAACACGACGATAAcg < 2:1334556/140‑1 (MQ=255) gATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCAAGGGTGAAAACGACGATAAcgccc > 1:5457/1‑140 (MQ=255) gATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCAAGGGTGAAAACGACGATAAcgccc > 1:5423/1‑140 (MQ=255) gATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCAAGGGTGAAAACGACGATAAcgccc > 1:5401/1‑140 (MQ=255) gATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCAAGGGTGAAAACGACGATAAcgccc > 1:5126/1‑140 (MQ=255) tGAGTTTATTCATAACTTTAAGAATAGTGCCTGACGGCCGTATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGTTTGAGCAATCCCGCCAGGGTGAAAACGACGATAAcgcccgc < 1:1012809/140‑1 (MQ=255) tttATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCcaca < 2:263606/140‑1 (MQ=255) tttATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCcaca < 2:569659/140‑1 (MQ=255) tttATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCcaca < 2:569630/140‑1 (MQ=255) ttAACGTTTCGAATCGAGGCATACGGCCGGATGGCGAAAAAATCACTGCACCTCCACTAGGTCGGCTGCCTGATGATGGCGCACGCGATTGAGCAATCCCTCCAGGGTTAATACGACGATATCGCCCGCCACAACGGCTa < 2:1656880/139‑1 (MQ=255) aaaaCGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTa < 2:1656887/138‑1 (MQ=255) aTAAGGTTAAGAATAGTGCCTGAGGGCCGGATCGCGCTAAAATGAGTGCTCCTCCTCTTGCTCGGCTGCCTGATGCTGGCGCCCGGGATTGAGCAATCCCGCCTGGGTTAAAACGACGATAACGCCCGCCACAACGGCTa < 2:458255/140‑1 (MQ=255) aTAACGTTATGATTCGAGCCTGACGGCCGGATCGCGCAAAAAGCACTGCTCCTCCACTTGCTCGGCTGCCTGATGCGGGCGCACGCGAGTGAGCAATCCCGCCAGGGTTAAAACGACGAGAACGCCCGCCACAACGGCTa < 2:172095/140‑1 (MQ=255) aTAACGTTAAGAATTGTGCCTGACGGCCGGTTCGCGGATAAATCACTGCTCCTCCAGTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTa < 2:458336/140‑1 (MQ=255) aTAACGTTAAGAATAGAGCCTGACGGCCGGATCGCTCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTa < 2:136387/140‑1 (MQ=255) aTAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTa < 2:40090/140‑1 (MQ=255) aaCGTTAAGATTAGAGCCTGACGGCCGGATCGCGCATAAATCACTGCTCCTCCACTCGCTCGGCTGCCTGTTGCTGGCGCAGGCGATGGAGCAATCCCGCCTGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAAc < 2:211068/140‑1 (MQ=255) aaCGTTAAGAATAGTGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAAc < 2:1185279/140‑1 (MQ=255) aaCGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTCGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAAc < 2:212688/140‑1 (MQ=255) aaCGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAAc < 2:1185164/140‑1 (MQ=255) tAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATg > 2:555963/1‑140 (MQ=255) aGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGaa > 2:142851/1‑140 (MQ=255) tgagCCTGACGGCCGTATCGCGAAAAAATCACTGCTCCTCAACTAGCTCGGCTGCCTGTTGCTGGCGCACGCGTTTGAGCAATCCCGCATGGTTTAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGc < 2:971867/139‑1 (MQ=255) agCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCaa > 1:1464393/1‑140 (MQ=255) agCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCaa > 1:214951/1‑140 (MQ=255) agCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCaa > 1:1464464/1‑140 (MQ=255) agCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCaa > 1:721459/1‑140 (MQ=255) agCATGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGATACGGCaa > 2:786556/1‑140 (MQ=255) ccTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGc > 1:151408/1‑140 (MQ=255) tGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGa > 1:768333/1‑140 (MQ=255) gcgggCCGGATCGCGCAAAATTCACTGCTCCTCCACTCTCCCGGCGGCCTTATGCTGGCGCCCGCGTTTGAGAAATCCCGCAAGGGTGTAAACGACGATAACGCCCGCCACAACGGATAACTGTTGACACGGCAAGCGAc < 1:1616205/137‑1 (MQ=255) gccGGCCGTATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGTTGCTGGCGCACGCGTTTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGAc < 1:1389073/138‑1 (MQ=255) gACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGAc > 1:1199326/1‑140 (MQ=255) gACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGAc > 1:347128/1‑140 (MQ=255) gACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGAc > 1:51217/1‑140 (MQ=255) gACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGAc > 1:1198905/1‑140 (MQ=255) gACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGAc > 1:1557262/1‑140 (MQ=255) gACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGAc > 1:140048/1‑140 (MQ=255) gACGGCCGGAACGAGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCTCCACAACGGCTAACAGATGAAACGGCAAGCGAc < 2:932342/140‑1 (MQ=255) ccggcggTATCCCGCAAAAATCACTGCTCCTCCACTCGCCCGGCTGCCTGTTGCTGGCGCCCGCGATTTAGAAATCCCGCCTGGGTTAACACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGAcc < 1:981968/139‑1 (MQ=255) cGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGAccg < 2:506451/140‑1 (MQ=255) cGGCCGGATCGCGCAAAAATCACTGCTCCTCCACGAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGAccg < 2:1651347/140‑1 (MQ=255) cGGCCGGATCGCGCAAAAATCACTGCTCCTCCACCAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGAccg < 2:789472/140‑1 (MQ=255) cGGCCGGATCGCGCAAAAATCACGGCTCCTCCACGATCTCGGCTGCATTATGGTGGCGCACGCGATTGAGCTTTCCGGCCAGGTTGAAAACGACTATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGAccg < 2:1082992/140‑1 (MQ=255) ggCCGGATCGCGAAAAAATCACTGCCCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCTTTTGAGAAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGAccgc < 1:1083790/140‑1 (MQ=255) gCCGTATCGCGCAAAAATAACTGCTCCCCCACTTGCTCGGCTGCCTGTTGCGGGCGCACGCGATTGACAAATCCCGCCTGGGTTAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGAccgcc < 1:123228/140‑1 (MQ=255) gtaTCGCGAAAAAATCACTGCACCTCCACTAGCTCGGCGGCCTTATGGTGGCGCCCGCGTTTGAGCATTCCCGCCCGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGtt < 1:175493/138‑1 (MQ=255) ggATCGCGAAAAAATCACGGCTCCTCCACTCGCTCGGCTGCCTGATGCTGGCGCACGCTATTGAGCAACCCCGCCCGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGtt < 1:437867/140‑1 (MQ=255) cgcAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCa > 1:697978/1‑140 (MQ=255) cgcAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCa > 2:266815/1‑140 (MQ=255) gaaaaaaTCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCTCATGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCAt < 2:222920/138‑1 (MQ=255) tGCTCCTCCACTCGCTGGGCTGCCTGATGCTGGCGCACGCTATTTAGAAATCCCGCCTGGGTCAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGcc < 1:959337/140‑1 (MQ=255) cACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCga > 2:1124625/1‑140 (MQ=255) cctcgCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCgac < 1:434224/136‑1 (MQ=255) aCTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCTGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCgac < 1:435432/140‑1 (MQ=255) cTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCCGCGGCCGATTTCgacc > 2:1012684/1‑140 (MQ=255) cTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCgacc > 2:1074696/1‑140 (MQ=255) cTCGGCTGCCTTTTGATGGCGAACGCTTTTGAGCAATCCCGCCTGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCgaccgaga < 1:550229/140‑1 (MQ=255) cTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCgaccgaga > 1:649946/1‑140 (MQ=255) cTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCgaccgaga > 1:580254/1‑140 (MQ=255) cTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCgaccgaga > 2:1193804/1‑140 (MQ=255) gCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCgaccgagaccga > 2:1172683/1‑140 (MQ=255) cTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCGACCGAGACCGAc > 2:90364/1‑140 (MQ=255) gCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGTCCGATTACGACCGAGACCGACAt > 2:1101133/1‑140 (MQ=255) tGCTGGCGCACGCGTTTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCGACCGAGACCGACATCACCAt < 1:1233506/140‑1 (MQ=255) tGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCGACCGAGACCGACATCTCCAt > 2:643510/1‑140 (MQ=255) tGGCGCACGCGTTTGAGCAATCCCGCCTGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCGACCGAGACCGACATCACCATCAg < 2:137450/140‑1 (MQ=255) tGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCGACCGAGACCGACATCACCATCAg < 2:1112423/140‑1 (MQ=255) tGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCGACCGAGACCGACATCACCATCAg < 2:563005/140‑1 (MQ=255) gcgcACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCGACCGAGACCGACATCACCATCAGGa < 2:1496835/140‑1 (MQ=255) gcgcACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCGACCGAGACCGACATCACCATCAGGa < 2:608819/140‑1 (MQ=255) cgcgTTTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCGACCGAGACCGACATCACCATCAGGATCAcc < 1:1199194/140‑1 (MQ=255) cgcgATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCGACCGAGACCGACATCACCATCAGGATCAcc > 1:621050/1‑140 (MQ=255) aGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCGACCGAGACCGACATCACCATCAGGATCACCATATTTAg < 2:235307/140‑1 (MQ=255) cAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCGACCGAGACCGACATCACCATCAGGATCACCATATTTAGCg < 2:685331/140‑1 (MQ=255) tCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCGACCGAGACCGACATCACCATCAGGATCACCATATTTAGCGATg > 2:257052/1‑140 (MQ=255) tCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCGACCGAGACCGACATCACCATCAGGATCACCATATTTAGCGATg > 2:907758/1‑140 (MQ=255) tCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCGACCGAGACCGACATCACCATCAGGATCACCATATTTAGCGATg > 2:1499578/1‑140 (MQ=255) ccGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCGACCGAGACCGACATCACCATCAGGATCACCATATTTAGCGATGCg > 1:1443460/1‑140 (MQ=255) cAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCGACCGAGACCGACATCACCATCAGGATCACCATATTTAGCGATGCGgaga < 2:41702/140‑1 (MQ=255) | ACCTTTTGGCGCGTCTGAGTTCGATGAGTTTATTCATAACGTTAAGAATAGAGCCTGACGGCCGGATCGCGCAAAAATCACTGCTCCTCCACTAGCTCGGCTGCCTGATGCTGGCGCACGCGATTGAGCAATCCCGCCAGGGTGAAAACGACGATAACGCCCGCCACAACGGCTAACAGATGAAACGGCAAGCGACCGCCGTTAAACCATAGCCAGCGGCCGATTTCGACCGAGACCGACATCACCATCAGGATCACCATATTTAGCGATGCGGAGA > NC_000913/4567210‑4567486 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |