| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,206,494 | G→T | 5.2% | pseudogene (352/780 nt) | jayE → | pseudogene, e14 prophage;Phage or Prophage Related |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,206,494 | 0 | G | T | 5.2% | 284.4 / 2.2 | 77 | pseudogene (352/780 nt) | jayE | pseudogene, e14 prophage;Phage or Prophage Related |
| Reads supporting (aligned to +/- strand): ref base G (38/35); new base T (2/2); total (40/37) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01 | |||||||||||
TGGCTGACACCCTGACAGGCGGATTTGATACTGAAGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATCCCATTCCGGAAGAATCAACGGAAACGGCGGCAAGACAACATATCGGGCCA > NC_000913/1206360‑1206628 | tgGCTGACACCCTGACAGGCGGATTTGATACTGAAGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCAtt > 1:268902/1‑140 (MQ=255)tgGCTGACACCCTGACAGGCGGATTTGATACTGAAGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCAtt > 1:1178217/1‑140 (MQ=255)tgGCTGACACCCTGACAGGCGGATTTGATACTGAAGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCAtt > 1:1427404/1‑140 (MQ=255) gCTGACACCCTGACAGGCGGATTTGATACTGAAGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTAc > 1:402974/1‑140 (MQ=255) gCTGACACCCTGACAGGCGGATTTGATACTGAAGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTAc > 1:1685187/1‑140 (MQ=255) gCTGACACCCTGACAGGCGGATTTGATACTGAAGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTAc > 1:1636500/1‑140 (MQ=255) gCTGACACCCTGACAGGCGGATTTGATACTGAAGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTAc > 1:1537326/1‑140 (MQ=255) tGACACCCTGACAGGCGGATTTGATACTGAAGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTAccc < 1:1148097/140‑1 (MQ=255) cccTGACAGGCGGATTTGATACTGAAGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCa < 2:823890/140‑1 (MQ=255) cccTGACAGGCGGATTTGATACTGAAGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCa < 2:1509747/140‑1 (MQ=255) cccTGACAGGCGGATTTGATACTGAAGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCa < 1:355194/140‑1 (MQ=255) cccTGACAGGCGGATTTGATACTGAAGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCa < 2:1692158/140‑1 (MQ=255) cccTGACAGGCGGATTTGATACTGAAGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCa < 2:20188/140‑1 (MQ=255) tGACAGGCGGATTTGATACTGAAGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATgg > 2:784389/1‑140 (MQ=255) gACAGGCGGATTTGATACTGAAGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTCCTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCAGTACCCGCGCATGGa > 2:1498933/1‑140 (MQ=255) aGGCGGATTTGATACTGAAGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACAt > 1:781794/1‑140 (MQ=255) aGGCGGATTTGATAATGAAGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTTGGCTAAAGAAGTGCCCGTCATTACCCGCGCATGGACaa > 1:781306/1‑139 (MQ=255) gCGGATTTGATACTGAAGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATAc > 2:774744/1‑140 (MQ=255) gggATTTGATACTGAAGAGCTGGAAACGTGGCGCGCCCGAGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACACGCGCATGGACATAcc < 1:1672751/139‑1 (MQ=255) ggATTTGATACTGAAGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCg > 2:820552/1‑140 (MQ=255) ggATTTGATACTGAAGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCg > 1:278630/1‑140 (MQ=255) ggATTTGATACTCAAGAGGTGGAAACGTGGCGCGGCCGCGTCATTGAGCGGTATTACTGGACGCCGCCGGGCGGTGCTGACGGGGACTATGTCGTCTCGGCTATAGAAGTGCCCGGCATTACCCGCGCATGGACATACCg > 2:143611/1‑140 (MQ=255) cTGAAGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATg < 1:1300503/140‑1 (MQ=255) tGAAGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATgg < 2:257088/140‑1 (MQ=255) aaGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGTTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATggga < 2:91616/140‑1 (MQ=255) aaGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATggga < 2:91617/140‑1 (MQ=255) cTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATgggaacggg > 1:653756/1‑140 (MQ=255) ggAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATgggaacgggaa < 2:385059/140‑1 (MQ=255) tGGCGCGCCCGCGTCATTGAGCGGTCTTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCGAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCgg > 2:253602/1‑140 (MQ=255) tGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCgg > 2:1599918/1‑140 (MQ=255) cccGCGTCATGGAGCGGTCGTACTGGACGCCGCAGGGCGGGGCTGACGGGGCCTCTGTCGTCTGGGCTACCGAAGTGCCCGGCAGTACCCGCGCATGGACATCCCGTCCCGTGAAGGGAACGGGAACTGTCGGTGtgatg < 2:1275845/140‑1 (MQ=255) gTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGc < 2:1221580/140‑1 (MQ=255) gTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGc < 2:1119388/140‑1 (MQ=255) gTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGc < 1:21545/140‑1 (MQ=255) tGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCcagca < 1:568216/140‑1 (MQ=255) tGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCcagca < 2:1363319/140‑1 (MQ=255) tGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCcagca < 2:1000401/140‑1 (MQ=255) tGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCcagca > 2:699704/1‑140 (MQ=255) tGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCcagca < 1:568259/140‑1 (MQ=255) tGAGCGGTATTACGGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCcagca < 2:1363309/140‑1 (MQ=255) ggTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGAc < 1:1244247/140‑1 (MQ=255) ggTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGAc < 1:751543/140‑1 (MQ=255) ggTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACGTTGTCGTCTGGGCTAAAGATGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGTTGGGAACGGGAACTGTCGGTGTGTTGATTGCCTGCAGTGAc < 2:1602716/140‑1 (MQ=255) cTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTa > 2:1240031/1‑140 (MQ=255) gACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCTGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATc > 2:1398335/1‑140 (MQ=255) gACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCTGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATc > 2:1398355/1‑140 (MQ=255) gACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATc > 2:1635885/1‑140 (MQ=255) gACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCACATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATc > 1:265118/1‑140 (MQ=255) cgccgcAGGGCGGGGCTTACGGGGAATAAGTCGTCTGGGCTAATGAAGTGCCCGGCATTACCAGCGCATGGACATACCGACACTAGATGTGAACGGGAACAGTCGGATAGATGATTGCCAGCAGTGACCTGAATAATcac > 1:1262187/1‑138 (MQ=255) cgccgcAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGACCGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATccc > 1:158965/1‑140 (MQ=255) cgccgcAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATccc > 2:1033255/1‑140 (MQ=255) cgccgcAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATccc > 1:1411975/1‑140 (MQ=255) cgccgcAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCACATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATccc > 1:261794/1‑140 (MQ=255) cgcagcAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATccc > 1:52610/1‑140 (MQ=255) ccgcAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATCCCAt > 1:949710/1‑140 (MQ=255) ccgcAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATCCCAt > 1:949587/1‑140 (MQ=255) ccgcAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATCCCAt > 1:788124/1‑140 (MQ=255) cgcAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATCCCAtt > 2:864927/1‑140 (MQ=255) cgcAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATCCCAtt > 2:791529/1‑140 (MQ=255) cgcAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATCCCAtt > 2:176347/1‑140 (MQ=255) cgcAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATCCCAta > 2:209613/1‑139 (MQ=255) ggCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATCCCATTCCGga < 2:1636500/140‑1 (MQ=255) gACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTTACCTGATTAATCCCATTCCGGAAGAATCAACGGAAAc < 2:948631/140‑1 (MQ=255) tATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATCCCATTCCGGAAGAATCAACGGAAAcggc < 1:509477/140‑1 (MQ=255) tGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATCCCATTCCGGAAGAATCAACGGAAAcggcgg > 1:1403401/1‑140 (MQ=255) gtcgtcTGGGCTAAAGAAGGGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATAATTCCCATTCCGGAAGAATCAACGGAAACggcggc < 2:1460475/140‑1 (MQ=255) tcgtcTGGGCTAAAGAAGTGCCCTGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATCCCATTCCGGAAGAATCAACGGAAACGGCGGCa < 1:1398355/140‑1 (MQ=255) tcgtcTGGGCTAAAGAAGTGCCCTGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATCCCATTCCGGAAGAATCAACGGAAACGGCGGCa < 1:1398335/140‑1 (MQ=255) tcgtcTGGGCTAAAGAAGTGCCCGGCATTCCCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATCCCATTCCGGAAGAATCAACGGAAACGGCGGCa < 1:1161120/140‑1 (MQ=255) tcgtcTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATCCCATTCCGGAAGAATAAACGGAAACGGCGGCa > 1:766177/1‑140 (MQ=255) tAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATCCCATTCCGGAAGAATCAACGGAAACGGCGGCAAGACTACata < 2:1264672/140‑1 (MQ=255) tAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGGCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATCCCATTCCGGAAGAATCAACGGAAACGGCGGCAAGACAACata < 2:1171825/140‑1 (MQ=255) agaagTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATCCCATTCCGGAAGAATCAACGGAAACGGCGGCAAGACAACATATCg < 1:379153/140‑1 (MQ=255) agaagTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATCCCATTCCGGAAGAATCAACGGAAACGGCGGCAAGACAACATATCg < 1:1112745/140‑1 (MQ=255) tGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATCCCATTCCGGAAGAATCAACGGAAACGGCGGCAAGACAACATATCGGGCCa < 2:1196223/140‑1 (MQ=255) tGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATCCCATTCCGGAAGAATCAACGGAAACGGCGGCAAGACAACATATCGGGCCa < 2:1196245/140‑1 (MQ=255) tGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATCCCATTCCGGAAGAATCAACGGAAACGGCGGCAAGACAACATATCGGGCCa > 2:957201/1‑140 (MQ=255) | TGGCTGACACCCTGACAGGCGGATTTGATACTGAAGAGCTGGAAACGTGGCGCGCCCGCGTCATTGAGCGGTATTACTGGACGCCGCAGGGCGGGGCTGACGGGGACTATGTCGTCTGGGCTAAAGAAGTGCCCGGCATTACCCGCGCATGGACATACCGTCACTTGATGGGAACGGGAACTGTCGGTGTGATGATTGCCAGCAGTGACCTGATTAATCCCATTCCGGAAGAATCAACGGAAACGGCGGCAAGACAACATATCGGGCCA > NC_000913/1206360‑1206628 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |