| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 624,604 | 0 | A | T | 32.6% | 148.8 / 11.1 | 96 | intergenic (‑94/‑281) | fepB/entC | ferrienterobactin ABC transporter periplasmic binding protein/isochorismate synthase 1 |
| Reads supporting (aligned to +/- strand): ref base A (42/18); new base T (0/29); total (43/53) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.15e-11 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
CCTGTTAATAGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATT > NC_000913/624467‑624737 | ccTGTTAATAGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTAACAAATCAGCTTCATGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAgg < 1:1332450/140‑1 (MQ=255) ttAATAGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGTGCGTAATGACAAATTCCACAAAGCGCACAATCAGTCCCCTCGCCACGTTGTGGAGAGGGTTAGGGTGa > 2:930895/1‑140 (MQ=255) ttAATAGAAGGGCGTTCCGGTAGAGCGGGGCGAGTCTCACAACTCAGCTTCCTGTTATTATTAAGGTTAGGGGCGTAAGGACTAGTTCGACCTAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTCGGGTgt > 2:928290/1‑139 (MQ=255) agtcgggCGTTGCGGTAGAGGGGGGCGTGTCACACAAATCTGATTCCTGTTTTTAATATGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTGGGGGTGTGGGTTTGGGTGAGGGGa < 2:910142/136‑1 (MQ=255) aGATGGGCGTTGCGGTTGTGCGGGGCTTGTCTCACAAATCAGCTTCCTGTTTTTAATATGTTTAAGGGCGTATTGAAAAATTCGAAAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGTGAGGGTTTGGGTTAGGGGa < 2:1498099/140‑1 (MQ=37) aGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGa > 1:883487/1‑140 (MQ=255) aGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGGGAAGTGCGTACTGACAAATTCGACAAAGCGCACTATCCGACCCCTCGCCCCTATGGGGAGCGGGTAAGGGTGAGGGGa > 1:1808479/1‑140 (MQ=255) ggCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagc > 1:681529/1‑140 (MQ=255) ggCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagc > 1:264506/1‑140 (MQ=255) cGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAAACCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAAcagccc > 1:1425543/1‑139 (MQ=255) tggggggggTGTCTCACAACTCTGCTGCGTGTTTTTAATATGGTTTGGGGGTTAATGACAAATTCGACAACGCGCACAATCGGTCCCCGCGCCGGTTGGGGGTGTGGTTTTGGGTGTGGGGAACAGCCAGCACTGGTGCg < 1:1073972/137‑1 (MQ=255) tgCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATATGGTTATGGGCGAAATGACAAATTCGACAAAGCGCACAATCCGACCCCTCGCCCCTTTGGGGAGTGGGTTTGGGTGAGGGGAACAGCCAGCACTGGTGCg < 1:815512/139‑1 (MQ=38) cgCGGGGCGTGTCTCACAAATCCGCTTCCTGTTCTTAATACGGTTACGGGCGTAATGACAATTTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGTGGGTTCGGGTGCGGGGAACAGCCAGCACTGGTGCg < 2:1375231/139‑1 (MQ=37) agCGGGGCTAGTCTCACAAATCTGCTTCATTTTATTAATACGTATAAGGGCTTAATCACAAATTCGACAACGCGCACATTCCGTCCCCTCGCCCCTTTGGGGAGTGGGTTTGGGTGAGGGGAACAGCCAGCACTGGTGCg < 1:369413/140‑1 (MQ=25) agCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGTGGTTTAGGGTGAGGGGAACAGCCAGCACTGGTGCg < 2:148067/140‑1 (MQ=255) cGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTAGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGaa > 1:1121040/1‑140 (MQ=255) cGGGGCGAGTCTCACAAATCAGCTTCCGGTTATTAATAAGGTTAAGGGCGTAATGTCAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTGTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGaa > 1:1120635/1‑140 (MQ=255) gggCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACa > 2:812583/1‑140 (MQ=255) gggCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACa > 1:427224/1‑140 (MQ=255) ggCGTGTCTCAAAAATCAGCTTCCTGTTATTAATATGGTTATGGGCGTACTGAAAAATTCGAAAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGTGGGTTTGGGTGCGGGGAACAGCCAGCACTGGTGCGAACAt < 1:499779/140‑1 (MQ=37) ggCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACAt > 1:295129/1‑140 (MQ=255) gTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAAcc > 2:1139384/1‑140 (MQ=255) ctcACAATTCAGCTTCCTGTTTTTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGTGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCt < 2:872039/140‑1 (MQ=255) ctcACAATTCAGCTTCCTGTTATTAATAAGTTTAAGGGCGTAATGACAATTTCGTCAAAGGGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCt < 2:735373/140‑1 (MQ=37) cacaaaaaTCAGATTCCTTTTATTAATACGGTTTTGGGGTTATTGACAATTTCGACAACGCGCACAATCCGTCCCCTCGCCCCTTGGGGGTGTGGGTTTGGGTGCGGGGAACAGCCAGCACTGGTGCGAACATTAACCCt < 1:1518094/135‑1 (MQ=255) acaAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCAc > 2:1783851/1‑140 (MQ=255) aaaaCAGTTCCCTGTTATTAATACGGTTACGGGCTTAATGAAAAATACGCAAAAGCCCACAAACCGCCCCCCCCCCCCTTTGGGGAGAGGGTTTGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCAccc < 1:301016/140‑1 (MQ=21) aaaTCAGCTTCCTGATATTAATATGGTTACGGGCGTAATCACAATTTCGCCAACGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGTTTTGGGTGAGGGTAACAGCCAGCACTGGTGCGAACATTAACCCTCAccc < 1:671575/140‑1 (MQ=25) aaTCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTTATGACAAATTCGAAAATGCGCAAAATCCGTCCCCTCGCCCCTTTGGGGTGAGGGTTCGGGTGCGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCAcccc < 2:1003643/140‑1 (MQ=37) cTTCCTGTTATTAATACGGTTACGGGCGTAATGACAATTTCTACAAAGCCCACAATCCGTCCCCTCGCCCATTTGGGGTGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCt < 2:429916/140‑1 (MQ=25) cTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGACCAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCt > 1:718304/1‑140 (MQ=255) ttCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTc > 1:1297380/1‑140 (MQ=255) tCCTGTTATTAATAAGTTTATGGGCGTATTCACAAATTCGCCAAAGCGCACAACCCGTCCCCGCGCCCATTTGGGGAGTGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCa < 2:394175/140‑1 (MQ=25) tCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGTGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCa < 2:394725/140‑1 (MQ=255) ccTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACAGTTACCCTCAGCCCAGCCCTCAc > 2:1434375/1‑140 (MQ=255) tGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCAccc > 1:236676/1‑140 (MQ=255) cggTTATGGGCTTAATCAAAATTTCCCAAACGCGCACAACCGGACCCCTCGCCCCTTTGGGTTGAGGTTTCGGGTGCGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGgaga < 1:142220/139‑1 (MQ=255) ggTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGagag > 1:135420/1‑140 (MQ=255) ggTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGagag > 2:312436/1‑140 (MQ=255) ggTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGagag > 2:69182/1‑140 (MQ=255) tAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAgggg > 1:1775016/1‑140 (MQ=255) tAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAgggg > 1:327069/1‑140 (MQ=255) cttAATGACAAATTCGAAAACGCCAACAATCCGTCCCCACGCCCCTTGGGGTTGTGGGTTTGGGTGTGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGaa < 1:1308315/138‑1 (MQ=255) cttAATGAAAAATTCTAAAAAGCGCACAATCCGGCCCCCCGCCCCTTTGGGGTGTGGTTTTGGGTGTGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGaa < 1:1042292/138‑1 (MQ=255) cttAATCACAAATCCGACAACGCGCACAACCCGTCCCCCCGCCCCTTTGGGGAGCGGGTTTGGGTGTGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGaa < 1:1323244/138‑1 (MQ=255) cGTAATGACAAATTCGAAAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGTTGAGGGTTTGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGaa < 2:246662/140‑1 (MQ=255) cGTAATGAAAAATTCGAAAATGCGAACAATCCGTCCCCTCGCCCCTTTGGGGTGTGGGTTTGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGaa < 1:906387/140‑1 (MQ=25) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGTTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACg > 1:312356/1‑140 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACg > 2:226050/1‑140 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACg > 2:1403024/1‑140 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACg > 2:1611997/1‑140 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACg > 1:1068440/1‑140 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACg > 1:1068131/1‑140 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACg > 1:731692/1‑140 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACg > 1:1814300/1‑140 (MQ=255) tAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACg > 1:403712/1‑140 (MQ=255) ttaCAAATTCTAAAACGCGCACAATCCGTCCCCTCGCCCGTTTGGGGTGTGGTTTTGGGTGTGGGTAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGgcg < 1:1189399/138‑1 (MQ=255) tGACAAATTCGACACAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGTGGGTTTGGTTGCGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGgcg < 1:1075456/140‑1 (MQ=25) tGACAAATTCCACAAAGCGCACAATCGGTCCCCTCGCCCGTTTGGGGTGTGGTTTTGGGTGTGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGgcg < 1:1256302/140‑1 (MQ=255) gtaaaaaTTCGTCTAAGCGCACAATCCGGCGCCTCGCCCCTTTGGGTAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTAACCCCAGCCCTCACCCTGGAAGGGTGAGGGGGCAGATCGgcg < 2:1668770/136‑1 (MQ=21) aatttCGACAACGCGCACAATCCGCCCCCTCGCCCTTTGGGGGTGTGGTTTTGGGTGCGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAgg < 1:359226/137‑1 (MQ=255) aatttCGAAAAAGGGCAAAATCCGCCCCCTCGCCCCTTTGGGGAGTGTGTTTGGGTGAGGGTAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAgg < 1:158172/137‑1 (MQ=25) aaaTTCTAAAAAGCGCACAATCCTTCCCCTCGCCCTTTTGGGTTGTGGTTTTGGGTGTGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAgg < 1:158198/140‑1 (MQ=255) aaaTTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAgg > 1:258899/1‑140 (MQ=255) aaaTTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAgg > 2:1705898/1‑140 (MQ=255) aaaTTCGAAAAAGCGAAAAATCCGTCCCCTCGCCCCTTTGGGGAGTGGGTTTGGGTGTGGGTAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAgg < 1:952075/140‑1 (MQ=25) ttCGACAACGCGCACAATCCGACCCCTCGCCCCTTTGGGGAGTGGTTTCGGGTGTGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACa < 1:1371829/140‑1 (MQ=25) ttCGAAAAAGCGCACAATCCGTCCCCTCCCCCCTTTGGGGAGCGGGTTAGGGTGTGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACa < 1:1651820/140‑1 (MQ=255) tctaCAAAGCGCACAATCCGGCCCCCCGCCCCTTTGGGGTGTGGGTTTGGGTGCGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACAt < 1:1062432/137‑1 (MQ=255) cAACGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATcaca < 1:449669/140‑1 (MQ=255) cAAAGCGCACAATCCGTCCCGTCGCCCCTTGGGGTAGAGGGTTTGGGTGTGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATcaca < 1:1618135/140‑1 (MQ=255) cAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTTGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATcaca < 2:326167/140‑1 (MQ=255) cAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATcaca < 2:1696680/140‑1 (MQ=255) cAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATcaca < 2:1756217/140‑1 (MQ=255) cAAAGCGCAAAACCCGTCCCCTCGCCCCTTTGGGGAGTGGGTTTGGGTGTGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATcaca < 1:451152/140‑1 (MQ=25) aaTCCGTCCCCTCGGCCCTTTGGGGAGAGGGTTAGGGTGATGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTAt < 2:901329/140‑1 (MQ=255) ccGTCCCCTCGCCCCTTTGGGTAGTGGGTTTGGGTGTGGGGAACAGCCAGCACTGGTGGGAACAATAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACTTTGCGCTTTTGCg < 2:1280269/140‑1 (MQ=25) gTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCa > 1:547028/1‑115 (MQ=255) gTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCa < 2:547028/115‑1 (MQ=255) gTCCCCTCGCCCCTGTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGTCCTCACCCGGGAAGGGGGAGGGGGCAGAACGGCGCAGGACATCACAGTGCGCTTATGCGaa > 1:896277/1‑140 (MQ=25) tCCCCTCGCCCCTTGGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCGGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAAt > 2:488880/1‑140 (MQ=255) cgcTCGCCCGTTTGGGGAGCGGGTTCGGGTGAGGGGCACAGCCTGCACTGGTGCGTACATTAACCCTCACCCCAGCCCTCACCCTGGTAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATcc < 2:619795/138‑1 (MQ=255) cccTCGCCCATTTGGGGAGAGGTTTAGGTTGAGGGTAACATCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAAAGGCGCAGGACATCACATTGCGCTTATGCGAATcc < 2:619812/140‑1 (MQ=255) cTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCAt > 1:1705592/1‑140 (MQ=255) cTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCAt > 1:1706183/1‑140 (MQ=255) gCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCaa > 1:689957/1‑140 (MQ=255) ccTTTGGGGAGAGGGTTTGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCaataa < 1:1614645/140‑1 (MQ=255) ttGGGGAGTGGGTTTGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGc < 1:1530855/140‑1 (MQ=255) ttGGGGAGCGGGTTTGGGGGAGGGCAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGc < 1:381560/140‑1 (MQ=255) ttGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGc < 2:427224/140‑1 (MQ=255) ttGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGc < 1:381480/140‑1 (MQ=255) ggggTGTGGGTTGGGGTGTGGGGCACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCtt < 1:74876/140‑1 (MQ=255) ggAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTtct < 2:584075/140‑1 (MQ=255) agGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGTGCTTATGCGAATCCATCAATAATGCTTCTCAtt > 1:725017/1‑140 (MQ=255) agGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCAtt > 1:913874/1‑140 (MQ=255) agGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCAtt > 1:845551/1‑140 (MQ=255) | CCTGTTAATAGAAGGGCGTTGCGGTAGAGCGGGGCGAGTCTCACAAATCAGCTTCCTGTTATTAATAAGGTTAAGGGCGTAATGACAAATTCGACAAAGCGCACAATCCGTCCCCTCGCCCCTTTGGGGAGAGGGTTAGGGTGAGGGGAACAGCCAGCACTGGTGCGAACATTAACCCTCACCCCAGCCCTCACCCTGGAAGGGAGAGGGGGCAGAACGGCGCAGGACATCACATTGCGCTTATGCGAATCCATCAATAATGCTTCTCATT > NC_000913/624467‑624737 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |