BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3070082	NA (NA)	5 (0.020)	3/262	NT	NA	noncoding (80/98 nt)	RIP213 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP213 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
*	?	NC_000913	3740971 =	NA (NA)	5 (0.020)	3/262	NT	NA	noncoding (8/98 nt)	RIP269 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP269 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 416 total aligned reads displayed.

TCACCTTGCTTTTGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAGTTCCTGGAATGCTTTCTCCAGACGAGCGATCATCGAAGTCTGA  >  NC_000913/3069933‑3070231

    cTTGCTTTTGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGc                                                                                                                                                   <  2:3874277/150‑1 (MQ=255)

    cTTGCTTTTGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGc                                                                                                                                                   <  1:4020900/150‑1 (MQ=255)

        cTTTTGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAg                                                                                                                                               <  2:572169/150‑1 (MQ=255)

         ttttGGCGAAAAAATCCCCTCAGAGCGGGGCTCAGACAGCTATCAATGTGCGCTTTGTCAGGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGTTACGTGTAGGCCTTATAAGCGTAgc                                                                                                                                              <  2:1373247/150‑1 (MQ=25)

         ttttGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAgc                                                                                                                                              <  2:3334843/150‑1 (MQ=255)

         ttttGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAgc                                                                                                                                              >  2:2876359/1‑150 (MQ=255)

         ttttGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAgc                                                                                                                                              >  2:4353198/1‑150 (MQ=255)

                  aaaaaTCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATgcgctacgcttatcaggc                                                                                                                                     <  1:3492077‑M1/150‑19 (MQ=255)

                    aaaTCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCaa                                                                                                                                   >  1:2511504/1‑150 (MQ=255)

                    aaaTCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCaa                                                                                                                                   <  1:1817759/150‑1 (MQ=255)

                        ccccGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAAtttt                                                                                                                               <  1:2825224/150‑1 (MQ=255)

                          ccGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGc                                                                                                                             >  1:3378765/1‑150 (MQ=255)

                          ccGCAGAGCGGGGCTCAGACAGAGATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGc                                                                                                                             >  2:4902294/1‑150 (MQ=255)

                             cAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCttt                                                                                                                          <  2:2423778/150‑1 (MQ=255)

                             cAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCttt                                                                                                                          <  1:1935114/150‑1 (MQ=255)

                              agagCGGGGCTCAGACAGATCTCACTGTGCGCTTTGTCATGCCGGATGCGGCGTGACCGCCTTATCCGGCCTACAAAAACCGGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCtttt                                                                                                                         <  2:2247562/150‑1 (MQ=255)

                               gagCGGGGCTCAGACAGATATCAATGTGCGCTTGGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTg                                                                                                                        <  2:4800810/150‑1 (MQ=255)

                                agCGGGGCTCAGACAGATATCACTGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTgg                                                                                                                       <  1:2388923/150‑1 (MQ=255)

                                agCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTgg                                                                                                                       <  1:1591749/150‑1 (MQ=255)

                                 gCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGc                                                                                                                      <  2:4710860/150‑1 (MQ=255)

                                      gCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGaaaa                                                                                                                 >  1:2766251/1‑150 (MQ=255)

                                        tCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGaaaaaa                                                                                                               <  2:1845252/150‑1 (MQ=255)

                                        tCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGaaaaaa                                                                                                               >  2:416416/1‑150 (MQ=255)

                                         cagacagaTATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGaaaaaaa                                                                                                              <  1:3142014/150‑1 (MQ=255)

                                         cagacagaTATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGaaaaaaa                                                                                                              <  1:2084367/150‑1 (MQ=255)

                                          agaccgaGATCCCTGTGCGCTGTGTCATGCCGGAAGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATgcgctacgcttatcaggcctacacgtatcctgcaatatattg                                                                                                             <  2:5089727‑M1/150‑43 (MQ=255)

                                           gacagaTATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGa                                                                                                            <  1:3055723/150‑1 (MQ=255)

                                            acagaTATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGAc                                                                                                           >  2:3825940/1‑150 (MQ=255)

                                               gaTATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCg                                                                                                        >  2:3953018/1‑150 (MQ=255)

                                                atatCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGc                                                                                                       >  1:245086/1‑150 (MQ=255)

                                                  atCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCag                                                                                                     >  1:2263291/1‑150 (MQ=255)

                                                     aaTGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGc                                                                                                  >  1:4384051/1‑150 (MQ=255)

                                                     aaTGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTAC‑AAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCg                                                                                                 >  1:3581192/1‑150 (MQ=255)

                                                         tgCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGc                                                                                              <  2:3164598/150‑1 (MQ=255)

                                                          gcgcTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGcc                                                                                             >  2:4478173/1‑150 (MQ=255)

                                                          gcgcTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGcc                                                                                             >  1:2403616/1‑150 (MQ=255)

                                                            gcTTTGTCATGCCGGATGCAGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCtt                                                                                           <  1:763654/150‑1 (MQ=255)

                                                             cTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTg                                                                                          >  2:855685/1‑150 (MQ=255)

                                                              gttGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTga                                                                                         <  1:4666303/149‑1 (MQ=255)

                                                               ttGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTgag                                                                                        <  1:4935779/150‑1 (MQ=255)

                                                                tGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTgaga                                                                                       <  1:92204/150‑1 (MQ=255)

                                                                  tCATGCCGGATGCGGCGTGAACGCCTTACCCGGCCTACAAAAACCTGCCAATTCAAGATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATa                                                                                     >  2:4057385/1‑150 (MQ=255)

                                                                      gCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCa                                                                                 >  2:5047387/1‑150 (MQ=255)

                                                                       ccGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCACATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAg                                                                                >  1:4113737/1‑150 (MQ=255)

                                                                       ccGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAg                                                                                >  1:55885/1‑150 (MQ=255)

                                                                       ccGGATAAGGCGTTCACGCCGCATCCGGCCTACAAAAACCTGCCAATTCAATATATTGCAGGATCCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTGTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAg                                                                                >  1:1528391/1‑150 (MQ=21)

                                                                        cGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGa                                                                               >  2:2485350/1‑150 (MQ=255)

                                                                         ggATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGaa                                                                              <  2:732772/150‑1 (MQ=255)

                                                                             gcggcgTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGCTACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGa                                                                          >  1:1219437/1‑150 (MQ=255)

                                                                              cggcgTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGaa                                                                         <  1:2646102/150‑1 (MQ=255)

                                                                              cggcgTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGaa                                                                         <  2:498306/150‑1 (MQ=255)

                                                                              cggcgTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGaa                                                                         >  1:320833/1‑150 (MQ=255)

                                                                                gcgTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAata                                                                       >  2:2991042/1‑150 (MQ=255)

                                                                                gcgTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTGTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAata                                                                       >  2:2094097/1‑150 (MQ=255)

                                                                                 cgTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAatat                                                                      <  2:4273311/150‑1 (MQ=255)

                                                                                  gTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATc                                                                     <  2:1165906/150‑1 (MQ=255)

                                                                                  gTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTAATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATc                                                                     >  1:4306784/1‑150 (MQ=255)

                                                                                   tGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCt                                                                    >  1:2198637/1‑150 (MQ=255)

                                                                                          cTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACGGaa                                                             >  2:305206/1‑150 (MQ=255)

                                                                                          cTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGaa                                                             >  1:888426/1‑150 (MQ=255)

                                                                                           ttATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAAc                                                            >  1:3736760/1‑150 (MQ=255)

                                                                                                cGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGa                                                       >  1:3018256/1‑150 (MQ=255)

                                                                                                cGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGACCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGa                                                       >  1:1302262/1‑150 (MQ=255)

                                                                                                 ggCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGAt                                                      <  2:2337111/150‑1 (MQ=255)

                                                                                                  gCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATc                                                     >  2:4582637/1‑150 (MQ=255)

                                                                                                       cAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGtt                                                >  2:1909774/1‑150 (MQ=255)

                                                                                                        aaaaaCCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTc                                               <  1:422692/150‑1 (MQ=255)

                                                                                                        aaaaaCCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTc                                               >  1:4554582/1‑150 (MQ=255)

                                                                                                          aaaCCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAg                                             >  1:4604775/1‑150 (MQ=255)

                                                                                                             ccTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAGTTc                                          <  1:702646/150‑1 (MQ=255)

                                                                                                               tGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAGTTCCt                                        <  1:823367/150‑1 (MQ=255)

                                                                                                                  aaaTTCAAGATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAGTTCCTGGa                                     <  2:548069/150‑1 (MQ=255)

                                                                                                                    aTTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAGTTCCTGGAAt                                   <  1:3428152/150‑1 (MQ=255)

                                                                                                                    aTTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAGTTCCTGGAAt                                   <  1:4809926/150‑1 (MQ=255)

                                                                                                                     ttCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAGTTCCTGGAATg                                  <  1:5041868/150‑1 (MQ=255)

                                                                                                                         atatatTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAGTTCCTGGAATGCttt                              >  2:1568349/1‑150 (MQ=255)

                                                                                                                         atatatTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAGTTCCTGGAATGCttt                              >  1:789160/1‑150 (MQ=255)

                                                                                                                          tatatTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTATTGGCGAAAAAAAGACCCGCAGAGCGGGCCTAGAGATAAGCAGAAAGGACTATCTTACAGAACGTCGATCGCGTTCAGTTCCTGGAATGCTTtc                             >  2:401025/1‑150 (MQ=255)

                                                                                                                            tatTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAGTTCCTGGAATGCTTtctc                           >  1:3936991/1‑150 (MQ=255)

                                                                                                                            tatTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAGTTCCTGGAATGCTTtctc                           <  1:2156476/150‑1 (MQ=255)

                                                                                                                              ttGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAGTTCCTGGAATGCTTTCTCCa                         >  2:1077022/1‑150 (MQ=255)

                                                                                                                               tGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAGTTCCTGGAATGCTTTCTCCAg                        >  2:4928182/1‑150 (MQ=255)

                                                                                                                                 cAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAGTTCCTGGAATGCTTTCTCCAGAc                      <  2:1939925/150‑1 (MQ=255)

                                                                                                                                    gATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTGGAGATAAGCAGAAAGGAATATCTTACAGACCGTCGATCGCGTTCAGTTCCTGGAATGCTTTCTCCAGACGAg                   >  1:4777241/1‑150 (MQ=255)

                                                                                                                                     aTACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAGTTCCTGGAATGCTTTCTCCAGACGAGc                  >  1:5058461/1‑150 (MQ=255)

                                                                                                                                     aTACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAGTTCCTGGAATGCTTTCTCCAGACGAGc                  <  2:4099205/150‑1 (MQ=255)

                                                                                                                                          tgtAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAATAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAGTTCCTGGAATGCTTTCTCCAGACGAGCGatcc             >  1:1071906/1‑149 (MQ=255)

                                                                                                                                          tgtAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAGTTCCTGGAATGCTTTCTCCAGACGAGCGatca             <  1:5086717/150‑1 (MQ=255)

                                                                                                                                          tgtAGGCCTCATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGCGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAGTTCCTGGAATGCTGTCTCCAGACGAGCGatca             >  2:4424010/1‑150 (MQ=255)

                                                                                                                                           gtAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAGTTCCTGGAATGCTTTCTCCAGACGAGCGatcat            >  1:1428667/1‑150 (MQ=255)

                                                                                                                                            tAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAGTTCCTGGAATGCTTTCTCCAGACGAGCGatcatc           >  1:1788759/1‑150 (MQ=255)

                                                                                                                                            tAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAGTTCCTGGAATGCTTTCTCCAGACGAGCGatcatc           >  2:2168280/1‑150 (MQ=255)

                                                                                                                                             aGGCCTGATTAGCGTAGCGCAACAGGCAATGTGGCTTTTGGCGAAACAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGGTCAGTTCCTGGAATGCTTTCTCCAGACGAGCGATCATCg          <  1:2919412/150‑1 (MQ=255)

                                                                                                                                               gCCTGCTAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGACCGTCGATCGCGTTCAGTTCCTGGACTGCTTTCTCCAGACGAGCGATCATCGaa        <  2:638331/150‑1 (MQ=255)

                                                                                                                                               gCCTGATgcgctacgcttatcaggcctacatgatttctgcaatatattgaatttggaagaatttgtaggccggataaggcgtttacgccgcatctggcataaacaaagcgcactgttccggcgttgagaaacgccggaaaacgtttcaaa        <  2:3557978‑M1/150‑144 (MQ=255)

                                                                                                                                               gCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAGTTCCTGGAATGCTTTCTCCAGACGAGCGATCATCGaa        >  2:1681856/1‑150 (MQ=255)

                                                                                                                                                 cTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAGTTCCTGGAATGCTTTCTCCAGACGAGCGATCATCGAAGt      >  1:3283818/1‑150 (MQ=255)

                                                                                                                                                  tGATgcgctacgcttatcaggcctacatgatttctgcaatatattgaatttggaagaatttgtaggccggataaggcgtttacgccgcatctggcataaacaaagcgcactgttccggcgttgagaaacgccggaaaacgtttcaaacag     >  1:1200253‑M1/1‑4 (MQ=255)

                                                                                                                                                     tAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAGTTCCTGGAATGCTTTCTCCAGACGAGCGATCATCGAAGTCTGa  <  2:2543254/150‑1 (MQ=255)

                                                                                                                                                     tAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAGTTCCTGGAATGCTTTCTCCAGACGAGCGATCATCGAAGTCTGa  <  1:629842/150‑1 (MQ=255)

TCACCTTGCTTTTGGCGAAAAAATCCCCGCAGAGCGGGGCTCAGACAGATATCAATGTGCGCTTTGTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAAACCTGCAAATTCAATATATTGCAGGATACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATTTTGCTTTTGGCGAAAAAAAGACCCGCAGAGCGGGCCTTGAGATAAGCAGAAAGGAATATCTTACAGAACGTCGATCGCGTTCAGTTCCTGGAATGCTTTCTCCAGACGAGCGATCATCGAAGTCTGA  >  NC_000913/3069933‑3070231

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.