New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3539757 =NA (NA)7 (0.020) 3/258 NT NA noncoding (12/34 nt) REP252 (repetitive extragenic palindromic) element; contains 1 REP sequences REP252 (repetitive extragenic palindromic) element; contains 1 REP sequences
?NC_000913 3539792 = NA (NA)intergenic (+86/‑371) yhgF/feoA putative transcriptional accessory protein/ferrous iron transporter, protein A

Only 100 of 372 total aligned reads displayed.

AACCGCCCGGCAGCCAAACCACGCGGTCGTGAAGCGCAGCCTGCCGGTAATAGCGCGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTATCATTTCATTAACAACTGAAACCTTAATTAAACA  >  NC_000913/3539608‑3539905
                                                                                                                                                     |                                                                                                                                                    
aacCGCCCGGCAGCCAAACCACGCGGTCGTGAAGCGCAGCCTGCCGGTAATAGCGCGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATa                                                                                                                                                      >  1:3822079/1‑150 (MQ=255)
aacCGCCCGGCAGCCAAACCACGCGGTCGTGAAGCGCAGCCTGCCGGTAATAGCGCGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATa                                                                                                                                                      >  1:3134595/1‑150 (MQ=255)
  taattcgaatagtgaattacccggactggctaatgtttaattaaggtttcagttgttaatgaaatgataaatattgccggaatatattatgagtttggctgtggaataaaaatgccggagatattctccggcacttttatgtcaggcAAg                                                                                                                                                    >  2:706740‑M1/148‑150 (MQ=255)
     cccGGCAGCCAACCCCCGCGGTCGTGACGCGCAGCCTGCCGGTACGCGCGCGAGGATGGAGGCGCGGGCGGCGGCAAGGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCg                                                                                                                                                 <  2:51282/150‑1 (MQ=255)
      tcgaatagtgaattacccggactggctaatgtttaattaaggtttcagttgttaatgaaatgataaagattgccggaatatattatgagtttggctgtggaataaaaatgccggagatattctccggcacttttatgtcaggcAAGGCGt                                                                                                                                                >  2:4829468‑M1/144‑150 (MQ=255)
       cGGCAGCCAAACCACGCGGTCGTGAAGCGCAGCCTGCCGGTAATAGCGCGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGtt                                                                                                                                               >  2:3110383/1‑150 (MQ=255)
        ggCAGCCAAACCCCGCGGTCGTGAAGCGCCGCCGGCCGGTAATCGCGCGTTGATGGATGCGGTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTc                                                                                                                                              <  2:2386370/150‑1 (MQ=255)
        ggCAGCCAAACCACGCGGTCGTGAAGCGCAGCCTGCCGGTAATAGCGCGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTc                                                                                                                                              <  2:513887/150‑1 (MQ=255)
         gCAGCCAAACCACGCGGTCGTGAAGCGCAGCCTGCCGGTAATAGCGCGATGTTGGATGCGCTGGCGGCGGCAATGGGCAAAAAACTTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCa                                                                                                                                             <  1:2872841/150‑1 (MQ=255)
         aatagtgaattacccggactggctacggtttaagtaaggtttcaggtgttaatgaaatgataaatattgccggaatatattatgagtttggcggtggaataaaaatgccggagatattctccggcacttgtatgtcaggcAaggcggtcg                                                                                                                                             <  2:2612772‑M1/10‑5 (MQ=255)
           aGCCAAACCACGCGGTCGTGAAGCGCAGCCTGCCGGTAATAGCGCGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCAcg                                                                                                                                           >  2:3139012/1‑150 (MQ=255)
            cccAAACCACGCGGTCGTCAAGCGCACCCTGCCGGAAATAGCGCGATGATGGATGCCCTGGCGGCGCCAATCCGAAAAAAACCTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCAcgc                                                                                                                                          <  2:4081365/149‑1 (MQ=255)
              cAAACCACGCGGTCGTGAAGCGCAGCCTGCCGGTAATAGCGCGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCAcgccg                                                                                                                                        <  2:2067095/150‑1 (MQ=255)
               aaaCCACGCGGTCGTGAAGCGCAGCCTGCCGGTAATAGCGCGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCAcgccgc                                                                                                                                       >  2:4644268/1‑150 (MQ=255)
                   cACGCGGTCGTGACGCGCAGCCTGCCGGTAATCGCGCGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCt                                                                                                                                   <  2:1576388/150‑1 (MQ=255)
                    aCGCGGTCGTGAAGCGCAGCCTGCCGGTAATATCGCGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAAAGCCCGTACTGGCCTAAGGTTCGAATTTGCACGAAATCGTATGGCAGATAATGCGTTAACGCCGCATCTg                                                                                                                                  >  1:1395904/1‑150 (MQ=255)
                       cgGTCGTGAAGCGCAGCCTGCCGGTAATAGCGCGATGATGGAGGCGCGGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCa                                                                                                                               <  2:1451536/150‑1 (MQ=255)
                         gTCGTGACGCGCCGCCTGCCGGTAATCGCGCGATGAGGGTGGCGCGGGCGGCGGCACTGGGCAAAAAACGTTACACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCaac                                                                                                                             <  1:2702361/150‑1 (MQ=38)
                         gTCGTGAAGCGCAGCCTGCCGGTAATAGCGCGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATGCGGCGTGAACGCCTTATCTgcccta                                                                                                                             <  2:3464934/150‑6 (MQ=255)
                                aGCGCAGCCTGCCGGTAATAGCGCGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGcc                                                                                                                      >  2:573307/1‑150 (MQ=255)
                                 aatgtttaattaaggtttcagttgttaatgaaatgataaatattgccggaatatattatgagtttggctgtggaataaaaatgccggagatattctccggcacttttatgtcaggcAAGGCGTTCACGCCGCATCTGGCAACGAACGCCt                                                                                                                     >  2:4091938‑M1/117‑150 (MQ=255)
                                    ccgCCGGCGGGTTATCGCGCGATGTGGGATGCGCGGGGGGGGGCACGGGGCAAAAAACGTTAAACGCCCGTACGGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGc                                                                                                                  <  1:4904366/148‑1 (MQ=37)
                                    cAGCCTGCCGGTAATAGCGCGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGc                                                                                                                  >  1:1586327/1‑150 (MQ=255)
                                    cAGCCTGCCGGTAATAGCGCGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGc                                                                                                                  <  1:3023615/150‑1 (MQ=255)
                                      gCCTGCCGGTCAGCGCGCGATGCTGGAGGCGCTGGCGGCGGCACTGGGCAAAAACCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCCCGCCGCATCTGGCAACGAACGCCTTGCCt                                                                                                                <  2:4029377/150‑1 (MQ=255)
                                      gCCTGCCGGTAATCGCGCGATGATGGATGCGCTGGCGGCGGCATGGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCt                                                                                                                <  1:5124229/150‑1 (MQ=255)
                                       ccggCCGGTAATAGCGCGATGATGGAGGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAACCGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTg                                                                                                               <  1:4993805/147‑1 (MQ=255)
                                       ccggCCGGTAAGCGCGCGATGTTGGCGGCGCGGGCGGCGGCACTGGGCAAAAAACGTTAACCGCCCGTACTGGCCTACGGTTCGAATTGGCACGAAATCGTAGGGCAGATACGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTg                                                                                                               <  1:4068047/147‑1 (MQ=255)
                                        cTGCCGGTAATAGCGCGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGa                                                                                                              <  1:3719136/150‑1 (MQ=255)
                                              gTAATAGCGCGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATaaa                                                                                                        >  2:1297908/1‑150 (MQ=255)
                                               tAATAGCGCGATGATGGATGCGCTGGCGGCGGCATTGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATaaaa                                                                                                       <  2:1013903/150‑1 (MQ=255)
                                                    gcgcGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGcc                                                                                                  <  1:2103013/150‑1 (MQ=255)
                                                    gcgcGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGcc                                                                                                  <  2:3824402/150‑1 (MQ=255)
                                                      gcgATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCgg                                                                                                >  1:1433830/1‑150 (MQ=255)
                                                         atgatgGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGACAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGgaga                                                                                             <  2:4564659/150‑1 (MQ=255)
                                                            ttggatgCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGTACGCCTTGCCTGACATAAAAGTGCCGGAGAata                                                                                          <  1:3082860/149‑1 (MQ=255)
                                                              ggatgCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATAtc                                                                                        >  1:3361518/1‑150 (MQ=255)
                                                               gatgCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATAtct                                                                                       >  2:2481583/1‑150 (MQ=255)
                                                                atgCGCTGGCGGCGGCATTGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATAtctc                                                                                      <  2:4428104/150‑1 (MQ=255)
                                                                atgCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATAtctc                                                                                      <  1:3427166/150‑1 (MQ=255)
                                                                atgCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATAtctc                                                                                      <  2:73288/150‑1 (MQ=255)
                                                                atgCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATAtctc                                                                                      <  2:2677605/150‑1 (MQ=255)
                                                                 tgCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTcc                                                                                     >  2:3314159/1‑150 (MQ=255)
                                                                 tgCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTcc                                                                                     <  1:4381895/150‑1 (MQ=255)
                                                                 tgCGCGGGCGGCGGCACTGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTcc                                                                                     <  1:1766174/150‑1 (MQ=255)
                                                                   cgcTGGCGGCGGCATTGGGAAAAAAACGTTACACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGATATTCTCCgg                                                                                   <  1:4816781/150‑1 (MQ=39)
                                                                    ataaatattgccggaatatattatgagtttggctgtggaataaaaatgccggagatattctccggcacttttatgtcaggcAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTg                                                                                                                   <  2:870294‑M1/36‑1 (MQ=255)
                                                                    ataaatattgccggaatatattatgagtttggctgtggaataaaaatgccggagatattctccggcacttttatgtcaggcAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTg                                                                                                                   >  1:870294‑M1/82‑117 (MQ=255)
                                                                     cTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCCTCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCa                                                                                 >  2:1168424/1‑150 (MQ=255)
                                                                      tGGCGGCGGCAAGGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAATGCCGGAGATATTCTCCGGCac                                                                                <  1:3993662/150‑2 (MQ=39)
                                                                           gcggcAATGGCAAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTa                                                                           <  2:2359605/150‑1 (MQ=255)
                                                                            cggcAATGGGCAAAAAACGTTACACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAATGCCGGAGATATTCTCCGGCACTTTTAt                                                                          <  2:3627533/150‑1 (MQ=39)
                                                                              gcAAGGGGCAAAAAACGTTACACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTc                                                                        <  1:4742294/150‑1 (MQ=255)
                                                                                 aTGGGCAAAAAACGTTAAACGCCCGTACTGGCCGACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCcac                                                                     <  2:4601426/150‑1 (MQ=255)
                                                                                  tGGGCAAAAAACGTTAACCGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCcaca                                                                    <  2:423436/150‑1 (MQ=255)
                                                                                  tGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCcaca                                                                    <  2:1933323/150‑1 (MQ=255)
                                                                                  tGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCcaca                                                                    <  1:3110383/150‑1 (MQ=255)
                                                                                  tGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCcaca                                                                    <  2:1818176/150‑1 (MQ=255)
                                                                                     gCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGcc                                                                 <  1:4647554/150‑1 (MQ=255)
                                                                                        aaaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCAATTTTATACCACAGCCaaa                                                              >  1:3107514/1‑150 (MQ=255)
                                                                                         aaaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAAc                                                             >  1:5037320/1‑150 (MQ=255)
                                                                                          aaaCGTTACACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACt                                                            <  2:4337198/150‑1 (MQ=255)
                                                                                          aaaCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACt                                                            >  1:696429/1‑150 (MQ=255)
                                                                                            aCGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCa                                                          <  1:578317/150‑1 (MQ=255)
                                                                                              gTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCata                                                        <  1:2481583/150‑1 (MQ=255)
                                                                                               ttAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCataa                                                       >  1:1934696/1‑150 (MQ=255)
                                                                                               ttAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCataa                                                       >  2:1712017/1‑150 (MQ=255)
                                                                                               ttAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCataa                                                       >  2:2232427/1‑150 (MQ=255)
                                                                                               ttAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATGTTTATTCCACAGCCAAACTCataa                                                       >  2:1780107/1‑150 (MQ=255)
                                                                                                     gCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAATGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATAtt                                                 >  2:3004107/1‑150 (MQ=255)
                                                                                                     gCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATAtt                                                 <  1:1164533/150‑1 (MQ=255)
                                                                                                     gCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATAtt                                                 >  2:723142/1‑150 (MQ=255)
                                                                                                            cTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCaa                                          >  1:3274418/1‑150 (MQ=255)
                                                                                                             tGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAat                                         <  2:3209649/150‑1 (MQ=255)
                                                                                                               gCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAatat                                       <  1:3859716/150‑1 (MQ=255)
                                                                                                               gCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAatat                                       >  1:451866/1‑150 (MQ=255)
                                                                                                               gCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAatat                                       <  1:1555555/150‑1 (MQ=255)
                                                                                                                ccTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATAtt                                      <  2:2786602/150‑1 (MQ=255)
                                                                                                                acTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCTCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCAGGAGACTATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATAtt                                      >  2:4371162/2‑150 (MQ=255)
                                                                                                                 cTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATAttt                                     <  2:5083901/150‑1 (MQ=255)
                                                                                                                 cTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCCGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATAttt                                     <  2:1131744/150‑1 (MQ=255)
                                                                                                                        tCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGAAATATTTAtcattt                              <  1:4135001/150‑1 (MQ=255)
                                                                                                                          gAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTAtcatttca                            >  1:4395843/1‑150 (MQ=255)
                                                                                                                           caTTTGCACGAACTCGTAGGGCAGATCAGGCGGTCACGCCGCATCTGGCCACGAACGCCTTGCCTGACATACCAGTGCCGGAGAATATCTCCGGCAATTTTATTCCACAGCCAAACTCATAATATAGTCCGGCAATATTTAtcatttcat                           <  1:2493154/149‑1 (MQ=255)
                                                                                                                             tttGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTATTATTCCACAGCCAAACTCATAATATATTCCGGCACTAGGTATCATTTCATTa                         >  1:4779121/1‑150 (MQ=255)
                                                                                                                                  aCGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTATCATTTCATTaacaac                    <  1:1033271/150‑1 (MQ=255)
                                                                                                                                  aCGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTATCATTTCATTaacaac                    >  1:730539/1‑150 (MQ=255)
                                                                                                                                     aaaTCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCTGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTATCATTTCATTAACAACTGa                 <  1:1047831/150‑1 (MQ=255)
                                                                                                                                     aaaTCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTATCATTTCATTAACAACTGa                 >  1:2887429/1‑150 (MQ=255)
                                                                                                                                        tCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCCAACTCATAATATATTCCGGCAATATTTATCATTTCATTAGCAACTgtacc              >  2:4168788/1‑146 (MQ=255)
                                                                                                                                           tAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATATAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTATCATTTCATTAACAACTGAAACCtt           <  1:3621758/150‑1 (MQ=255)
                                                                                                                                            aGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTATCATTTCATTAACAACTGAAACCtta          <  2:4988211/150‑1 (MQ=255)
                                                                                                                                             gggCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTATCATTTCATTAACAACTGAAACCttaa         <  1:1104932/150‑1 (MQ=255)
                                                                                                                                              ggCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTATCATTTCATTAACAACTGAAACCttaat        <  2:1227818/150‑1 (MQ=255)
                                                                                                                                              ggCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTATCATTTCATTAACAACTGAAACCttaat        <  1:2288515/150‑1 (MQ=255)
                                                                                                                                              ggCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTATCATTTCATTAACAACTGAAACCttaat        >  1:2259713/1‑150 (MQ=255)
                                                                                                                                              ggCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTATCATTTCATTAACAACTGAAACCttaat        >  1:1243230/1‑150 (MQ=255)
                                                                                                                                                 aGATAAGTCGTTCACGCCGCATCTGGCATAGTTCGCCTTGCCTGACATAAAAGTGCCGTTGTATTTCTCCGTCATTTTTTTTCCAGAGCCTCTCTCATATTATATTCATGCATTATTTATCATTTCTTTATCAACTGTAACCttaattaa     <  2:992160/150‑1 (MQ=255)
                                                                                                                                                 aGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTATCATTTCATTAACCACTGAAACCttaattaa     <  2:654771/150‑1 (MQ=255)
                                                                                                                                                    tAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTATCATTTCATTAACAACTGAAACCTTAATTAAACa  <  2:139295/150‑1 (MQ=255)
                                                                                                                                                     |                                                                                                                                                    
AACCGCCCGGCAGCCAAACCACGCGGTCGTGAAGCGCAGCCTGCCGGTAATAGCGCGATGATGGATGCGCTGGCGGCGGCAATGGGCAAAAAACGTTAAACGCCCGTACTGGCCTACGGTTCGAATTTGCACGAAATCGTAGGGCAGATAAGGCGTTCACGCCGCATCTGGCAACGAACGCCTTGCCTGACATAAAAGTGCCGGAGAATATCTCCGGCATTTTTATTCCACAGCCAAACTCATAATATATTCCGGCAATATTTATCATTTCATTAACAACTGAAACCTTAATTAAACA  >  NC_000913/3539608‑3539905

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.