| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,504,880 | A→C | 8.4% | intergenic (+97/+55) | frlR → / ← yhfS | putative DNA‑binding transcriptional regulator/FNR‑regulated pyridoxal phosphate‑dependent aminotransferase family protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,504,880 | 0 | A | C | 8.4% | 672.4 / 14.0 | 248 | intergenic (+97/+55) | frlR/yhfS | putative DNA‑binding transcriptional regulator/FNR‑regulated pyridoxal phosphate‑dependent aminotransferase family protein |
| Reads supporting (aligned to +/- strand): ref base A (86/129); new base C (19/6); total (107/141) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.01e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 257 total aligned reads displayed.
CTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTG > NC_000913/3504732‑3505029 | ttctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCaaa < 1:2252210/150‑1 (MQ=255) ttctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAAGTTTACATCCCGTACGTTCCCCGCACCCTAA‑CCCTCTCCCCcaa > 2:352745/1‑150 (MQ=255) tctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAg < 1:2779306/150‑1 (MQ=255) ctGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGATATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACACCCAAA‑CCCTCTCCCCAAAgg > 2:1699164/1‑150 (MQ=255) tGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAggg < 2:1814374/150‑1 (MQ=255) gcgcCAATCGCATCACCGGCCCTAGTGAGAATAAAAGACCGGCACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTCA‑CCCTCTCCCCCCCGGGGCGa < 2:1252847/150‑1 (MQ=25) ccAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAggg < 2:59571/150‑1 (MQ=255) ccAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAggg > 2:3873971/1‑150 (MQ=255) ccAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCGCCCCTTTGGGGAGAggg < 1:3701966/150‑1 (MQ=39) caaaTCGCATCACCTTAACTATTGATAATAAAAGACATTAACGGTAGTCCGGATATGTTGCGCCAGCATCGAATCGGGCGTTGCTGGCGGGTTGATTTTTACATCCCGTTCGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAggg < 1:2648796/148‑1 (MQ=37) cAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCAAA‑CCCACACCCCAAAGGGGCGAgggg > 1:1657554/1‑150 (MQ=255) cAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTACCCTCACCCTAA‑CCCGCTACCCCAAGGGGCGAgggg > 1:371974/1‑150 (MQ=255) cAATCGCATCACCTTAACAATTGATAATAAAAGACATTAACAGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACACCCTAA‑CCCACACCCCAAAGGGGCGAgggg > 2:2864007/1‑150 (MQ=39) aaTCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTGCCCGACCCCCAA‑CCCACTCCCCCCAGGGGCggggggg > 1:1877344/1‑149 (MQ=38) aaTCGCATCACCTGAACTATTGATAATAAAAGACATTAACCGTAGGCCGGCTAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTGTACATCCCGTCCGGTCCCCGCCCCCAAC‑CCCGCACCCCCCACGGGCGCggggc > 1:2322607/1‑149 (MQ=25) aTCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAgggtta < 2:3154067/150‑4 (MQ=255) aTCGCATCACCTTAACGATTGATAATACAAGACATTCACCGGAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTGTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCGCCCCTTTGGGGAGAgggtta < 2:2662309/150‑4 (MQ=38) cATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCCCCCTAA‑ACCACTCCCCCAAGGGGCGAGGGGACCGtt > 1:4983848/1‑150 (MQ=255) tCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCa < 2:3481659/150‑1 (MQ=255) ttcaCTCTTGATAATAAAAGACATGCACCGGAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGGTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACg < 2:4504823/147‑1 (MQ=38) tAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACACCCAAA‑CCCACACCCCCAAAGGGCCAGGGGACCGTGCAATACgg > 1:1112763/1‑150 (MQ=38) aCTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGaa < 1:4587470/150‑1 (MQ=255) tATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAAtt < 2:3695332/150‑1 (MQ=255) ttGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACACCCAAA‑ACCACAACCCCAAGGGGCGAGGGGCCCGGTCAGTACGGAAATTa > 1:1945990/1‑150 (MQ=38) ttGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTACCCACAACCAAA‑CCCACTACCCAAATGGGCGAGGGGACCCTTCAGTACGGAATTTa > 1:3864422/1‑150 (MQ=38) aaaaGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGGTGAATTTTACATCCCGTACGTTGCCCGCACCCAAA‑ACCACACCCCCAAGGGGCGGGGGGGCCCGTGAGTGAGGAAGTTAGCGTGTCg > 1:973418/1‑150 (MQ=21) aaaGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCGCACCCAAA‑CCCTCTCCCCAAACGGGCGAGGGGACCGGTCAGTACGGAATTTAGCTTGACgg > 2:4141818/1‑150 (MQ=255) aaaGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACACCCTAA‑CCCTCTACCCAAATGGGCGAGGGGACCGGTCAGTAACGAATTTAGCTTGACgg > 2:673406/1‑150 (MQ=39) aGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTg < 2:2363891/150‑1 (MQ=255) gACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAACCCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTg < 2:299478/150‑1 (MQ=255) gACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGc < 2:2057266/150‑1 (MQ=255) gACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGGTGAATTTTACATCCCGTACGGTCCCCACACCCAAA‑CCCACACCCCCAACGGGCCCGGGGCCCGGTCAGTAAGGCAAGTAGCTTGACGGTGc > 1:3392928/1‑150 (MQ=25) tAACCGTCGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACCTCCCGTTCGTTCCCCTCACCCTAA‑CCCTCTCCCCACAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATcc < 1:716191/150‑1 (MQ=255) ccGTTGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGc < 1:1308734/150‑1 (MQ=255) tAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGTATTTTAAATCCCGTACGGTACCCCCACCCGAA‑ACCAAAACCCAAAGGGGGGAGGGGGCCGGTGCGGACGGAAATTTTCTTGTAGGGGCTATCCAGccat > 1:4714468/1‑147 (MQ=16) gCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTaaa < 2:2305820/150‑1 (MQ=255) ggATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCGCACCCTAA‑ACCAATCCCCCAAGGGGCGCGGGGACCGGTCAGTACCGAATTTAGCTTGACGGTGCTATCCAGCATTaaaaaa > 2:742891/1‑147 (MQ=255) gATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACt < 2:2680708/150‑1 (MQ=255) attcaacgcgcCAGCATCGCCGGATGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCACCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCATGACGGTGCTATCCAGCCGTAAAAACTg > 2:4702036/8‑150 (MQ=25) tAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTgg < 2:899307/150‑1 (MQ=255) tAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTgg < 2:810866/150‑1 (MQ=255) gcatcgcctcCGGCGATGCTGGCGCGTTGAATTGTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCAc < 1:4951324/150‑1 (MQ=255) gcatcgcatcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCAc < 1:4438183/150‑1 (MQ=255) gcatcgcatcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCAc < 1:2502572/150‑1 (MQ=255) gcatcgcatcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCAAA‑ACCACTCCCCAAACGGGCGAGGGGACCGGTCAGTACGGAAATTATCTTGACGGTGCGAACCAGCAATAAATACAGGCAATaaacgcac > 2:1441137/1‑143 (MQ=255) gcatcgcatcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGGTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCAc < 1:1468397/150‑1 (MQ=255) atcgcatcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGc < 2:2530335/150‑1 (MQ=255) atcgcatcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGc < 2:2709894/150‑1 (MQ=255) atcgcatcCGGCGATGCTGGCGCGTTGAATTGTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCACAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGc < 2:3344356/150‑1 (MQ=255) catcCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTACCCACACCCAAA‑CCCACTCCCCAAAGGGGCGCGGGGCCCGGTCAGTACGGAATTTAGCGTGTCGGTGCTATCCAGCATTAAATACTGGCAATAATCTAACGCaaaa > 2:4464342/1‑150 (MQ=255) ggCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCgc < 1:3063253/150‑1 (MQ=255) ggCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCACACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCAATAAATACTGGCAATACTCTCAAGCAAAATCCgc > 2:1182410/1‑150 (MQ=255) aTGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCgcagca < 1:273938/150‑1 (MQ=255) aTGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCgcagca < 2:5014854/150‑1 (MQ=255) tGCTGGCGCGTTGAAATTTACATCCCGAACGTTCCCCTCACCCAAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACCCAAAATCCGCAGCAc < 1:1769217/150‑1 (MQ=255) tGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGt < 2:4598745/150‑1 (MQ=255) cgTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCtt < 2:5004548/150‑1 (MQ=255) aaTTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCg < 2:4417009/150‑1 (MQ=255) ttttGCATCCCGTACGTTCCCCTCACCCTAA‑CTCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTgg > 1:404618/1‑107 (MQ=255) ttttGCATCCCGTACGTTCCCCTCACCCTAA‑CTCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTgg < 2:404618/107‑1 (MQ=255) tttACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTg < 1:4179052/150‑1 (MQ=255) ggtACATCCGGTACGTTCGGCTCCCGCTCA‑CGCTCGCCCCTCAGGGGCGAGGGGACCGTTCAGTCCGGTATTTCGCTTGACGGTGCTATCGAGCAGTAAATACTGGCTATTCTCTCACGCATAATCCGGTGCTCCGTGTCTTCACAGCtt < 2:3645289/148‑2 (MQ=255) ttACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGc < 1:3367103/150‑1 (MQ=255) tCCCGTACGTTCCCCTCACCCAAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTc < 1:1365027/150‑1 (MQ=255) ccGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCgg < 1:8496/150‑1 (MQ=255) ccGTACGTTCCCCACACCCTAA‑ACCACAACCCAAAGGGGCGAGGGGACCGGTCAGTACGGAATTTAGCTTGACGGTGCTAACCAGCATTAAATAAAGGCAATACACTCACCCAAAATACGCAGCACCGTCTCTTCACCGCTGCGATTAgg > 2:3212267/1‑150 (MQ=255) cGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCggg > 2:3430764/1‑150 (MQ=255) gTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGt < 2:2167444/150‑1 (MQ=255) gTACGTTCCCCTCACCCTAA‑ACCTCTCCCCAAAGGGGCGAGGGGACCGTTAATTAAGGAATTTTTGTTTAAGGTTCTATAAATCATTAAATAATGTCAATAATATAACGCAAAATACGAAGCAACGTATATTAACCGCTGAGAttatggt > 2:1940161/1‑145 (MQ=12) cGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTAGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTaa < 2:2804332/150‑1 (MQ=255) cGTTCCCCTCACCCTAA‑CCCACTCCCCACAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTaa < 2:328118/150‑1 (MQ=255) ggtCCCCTCACCCTCA‑CCCTCTCCCCCAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAAt < 1:3186872/148‑1 (MQ=255) gTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAAt < 1:3509466/150‑1 (MQ=255) tCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGc > 2:4345216/1‑150 (MQ=255) ccTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGaa > 2:2391040/1‑150 (MQ=255) cTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAAt > 1:1253578/1‑150 (MQ=255) tCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCTCTGCGATTCGGGTTAATGCGAATc > 1:2385775/1‑150 (MQ=255) aCCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGc > 2:1134002/1‑150 (MQ=255) ccTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGcac > 2:1275838/1‑150 (MQ=255) ccTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGcac > 2:3377491/1‑150 (MQ=255) ccTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGcac > 2:2434015/1‑150 (MQ=255) a‑CCCTCTCCCCAACGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAACATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATg < 2:708057/150‑1 (MQ=255) ccTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGtt > 1:4630698/1‑150 (MQ=255) ctctCCCCATAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTc < 1:2649268/150‑1 (MQ=255) ctctCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCTATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTc < 1:1017135/150‑1 (MQ=255) ctctCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTc < 1:2952037/150‑1 (MQ=255) ctctCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTc > 1:2110924/1‑150 (MQ=255) ctctCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTGGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTc < 2:4118022/150‑1 (MQ=255) tctcCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCt > 2:1034794/1‑150 (MQ=255) tctcCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCt > 1:3564301/1‑150 (MQ=255) cccAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGAtt > 2:4661595/1‑150 (MQ=255) cccAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGAtt > 2:3794173/1‑150 (MQ=255) cccAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGAtt > 2:2782290/1‑150 (MQ=255) cccAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGAtt > 1:4535515/1‑150 (MQ=255) cccAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGAtt > 2:180096/1‑150 (MQ=255) ccAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGTTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATtg > 1:544053/1‑150 (MQ=255) ccAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATtg > 2:2211929/1‑150 (MQ=255) cAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATtgt < 2:1657554/150‑1 (MQ=255) cAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATtgt > 1:219311/1‑150 (MQ=255) aaaGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATtgtg > 2:407510/1‑150 (MQ=255) | CTTCTGCCGCGCCAATCGCATCACCTTAACTATTGATAATAAAAGACATTAACCGTAGGCCGGATAAGATGCGCCAGCATCGCATCCGGCGATGCTGGCGCGTTGAATTTTACATCCCGTACGTTCCCCTCACCCTAA‑CCCTCTCCCCAAAGGGGCGAGGGGACCGTTCAGTACGGAATTTAGCTTGACGGTGCTATCCAGCATTAAATACTGGCAATACTCTCACGCAAAATCCGCAGCACCGTCTCTTCACCGCTGCGATTCGGGTTAATGCGAATCGCACAATGTTCTGATTGTG > NC_000913/3504732‑3505029 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |