Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,959,515 T→A 7.0% intergenic (+70/+17) ilvC → / ← ppiC ketol‑acid reductoisomerase, NAD(P)‑binding/peptidyl‑prolyl cis‑trans isomerase C (rotamase C)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,959,5150TA 7.0% 822.0 / 19.9 285intergenic (+70/+17)ilvC/ppiCketol‑acid reductoisomerase, NAD(P)‑binding/peptidyl‑prolyl cis‑trans isomerase C (rotamase C)
Reads supporting (aligned to +/- strand):  ref base T (106/136);  new base A (21/3);  total (144/141)
Fisher's exact test for biased strand distribution p-value = 5.02e-05
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 295 total aligned reads displayed.

GCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGAACCATCTGACCCTGGCGGAATTCACCT  >  NC_000913/3959366‑3959664
                                                                                                                                                      |                                                                                                                                                     
gCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCt                                                                                                                                                       <  1:907186/150‑1 (MQ=255)
   gCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGga                                                                                                                                                    <  2:41425/150‑1 (MQ=255)
      aTGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGaa                                                                                                                                                 <  1:540881/150‑1 (MQ=255)
      aTGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGaa                                                                                                                                                 <  1:1007256/150‑1 (MQ=255)
        gCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCACAACCCCACCCACTCCCCCCGGGAGA‑GGGAGAAAAAACACAAGGCCATATACGGGAGAAgg                                                                                                                                               >  2:1628779/1‑150 (MQ=255)
          gATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCACACCCCCACCCACTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGcc                                                                                                                                             >  2:3211597/1‑150 (MQ=255)
           aTTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACGCAAGGCCTTCTCCAGGAGAAGGCCt                                                                                                                                            <  1:4985636/150‑1 (MQ=255)
           aTTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACGCAAGGCCTTCTCCAGGAGAAGGCCt                                                                                                                                            <  1:4514661/150‑1 (MQ=255)
            ttGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCAGGAGAAGGCCtt                                                                                                                                           <  2:1300442/150‑1 (MQ=255)
            ttGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCGTCTCCTGGAGAAGGCCtt                                                                                                                                           <  2:38134/150‑1 (MQ=255)
              gAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGc                                                                                                                                         <  1:50260/150‑1 (MQ=255)
                gCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTa                                                                                                                                       <  1:2620614/150‑1 (MQ=255)
                  aggtaggtAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCTCACAGGGAGA‑GGGAGAATACACTCAAGGCCTTATCCTGGAGAAGGCCTTGCTAtt                                                                                                                                     <  1:4737179/150‑1 (MQ=255)
                    gtaggtaAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGAGGGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTa                                                                                                                                    >  2:2362273/1‑150 (MQ=255)
                     taggtaAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGGCCGCAACCCCACCCAAAACCACAGGGGGT‑GGGTGGAAACAAACAAGGCCGTATCCGGGGGAAGGCCGTGCTATTAGt                                                                                                                                  >  2:3983570/1‑150 (MQ=255)
                         taAGAAACTGCGCGGCTATATGACAGATATGAACCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCg                                                                                                                              <  2:2011629/150‑1 (MQ=255)
                         taAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGGCCGCCCCCCCCCCCCACACCCCACGGCGA‑GGGAGTAAAAACACAAAGCCGTAACAGGGAGACGGCCGGGCTATTATTTggg                                                                                                                              >  2:1929477/1‑148 (MQ=255)
                         taAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCCACCCACTCCCACAGGGCGA‑GGGAGAAAACACACAAGGCCATCTCCAGGAGAAGGCCTTGCTATTAGTTGCg                                                                                                                              >  2:2712653/1‑150 (MQ=38)
                          aaGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCgg                                                                                                                             <  1:1701226/150‑1 (MQ=255)
                          aaGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCgg                                                                                                                             <  1:4777417/150‑1 (MQ=255)
                          aaGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCCCCCCCCCCCCCACAACCCCACGGGGA‑GGGTGAAAAAACACAAGGCCGTCTCCGGGGGAACGCCGGGGGATTAGTTGCgg                                                                                                                             >  2:1782067/1‑150 (MQ=255)
                           aGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCGCACCCCGACCCACTCCCACAGGGAGT‑GGGAGAAAACACAAAATGCCTTCTCCTGGAGAATGCCATGCTATTATTTGCGGt                                                                                                                            >  1:1675226/1‑150 (MQ=255)
                             aaaCTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCAAACCCACAGGGCGA‑TGGCGAAAACAAGAAACGCCGTCTCCAGGCGAAGGCCGGGCAATTAGTTGCGGGAc                                                                                                                          >  1:5112490/1‑150 (MQ=255)
                              aaCTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACa                                                                                                                         <  1:2409920/150‑1 (MQ=255)
                                 tGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCCACCCACACCCACAGGGCGA‑GGGAGCAAACACTCAAGGCCGTCACCAGGAGAATGCCGTGCGATTAGTTGAGGTACAGcc                                                                                                                      >  2:3697695/1‑149 (MQ=255)
                                  gcgcGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCAc                                                                                                                     <  1:3464807/150‑1 (MQ=255)
                                    gcgGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCt                                                                                                                   <  1:1052053/150‑1 (MQ=255)
                                      ggCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGGTGCTGTACCGCAACtaa                                                                                                                 <  1:180710/150‑3 (MQ=255)
                                      ggCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCACACCCACACGGAGA‑GGGAGAAAACACACAAGGCCATCACCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTa                                                                                                                 >  2:4213065/1‑150 (MQ=38)
                                        cTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAat                                                                                                               <  2:2255700/150‑1 (MQ=255)
                                        cTATATGACAGATATGAAACGTATTGCTGTAGCGGGTTAAGTGCGCGCTGATGCCCGCAAACCCACCCACACACACACGGTGT‑GGGCTAAAACAAACAATGCCATCTACTTGAGAACGCCATGATCATAATTGAGTTACAGCAccaaaaa                                                                                                               >  1:5065593/1‑145 (MQ=255)
                                          atatGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAatga                                                                                                             <  1:4469129/150‑1 (MQ=255)
                                             tGACAGATATGACACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGAtgt                                                                                                          <  1:2290303/150‑1 (MQ=255)
                                             tGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCACGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGAtgt                                                                                                          <  2:2548613/150‑1 (MQ=255)
                                             tGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCAGATGCCCTCACCCCGACCCTCTCCCACCGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGAtgt                                                                                                          <  2:3754545/150‑1 (MQ=255)
                                               tccgATCTGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGa                                                                                                        <  1:1622220/147‑1 (MQ=255)
                                                 aGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTACCACAGGGGGG‑GGGCGAAAACACGCAAGGCCTTCTCCGGGAGGAGGCCGTGCTATTAGTTGCGGGTCAGCACCATAATGTTGTGgta                                                                                                      >  2:3713116/1‑150 (MQ=37)
                                                      tGAAACGGATTGCGGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCCCAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAACGATGTGATATCCGa                                                                                                 <  2:5110348/150‑1 (MQ=255)
                                                        aaaCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCGCACCCCGACCCACACCCCCACGGGGA‑GGGGGAAAACACAAAAGGCCTTCACCTGGAGAAGGCCGTGCTATTAGTTGCGGTACAGCACCATAATGATGTGATATACGAAc                                                                                               >  2:1052312/1‑150 (MQ=255)
                                                          aCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTg                                                                                             <  2:2750662/150‑1 (MQ=255)
                                                          aCGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCACTACCACAGGGAGA‑GGGAGAAAACACACAAGGCCTTCTCCTGGAGAACGCCTTGCAATTAGTTGCGGTACAGCACCATAATGATGTGATATACGaaaag                                                                                             >  2:2795941/1‑147 (MQ=38)
                                                           cGTATTGCTGTTGCGGGTTAAGGGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTgg                                                                                            <  1:1307937/150‑1 (MQ=255)
                                                              aTTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGgtg                                                                                         <  1:3270663/150‑1 (MQ=255)
                                                                     ttGCGGGTTAAGTGCGCGCTGATGCCCTCAACCCGACCCTCACCCACAGGGAGA‑GGGAGAAAAAACTCAAGGCCGTGTCCTGGAGAAGGCCTGTGTATTATTTTGGGTACAGCACCTAAATGAGGTGATATCCGCCCAGGGTGTGCAGCg                                                                                  >  2:3567923/1‑150 (MQ=25)
                                                                       gCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCggg                                                                                <  1:3983570/150‑1 (MQ=255)
                                                                        cGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGc                                                                               <  1:2313643/150‑1 (MQ=255)
                                                                            ttAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTAGTAGTGGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGt                                                                           <  1:1972053/150‑1 (MQ=255)
                                                                            ttAAGTGCGCGCTGATGCCCACACCCCCACCCACACCCACAGGGAGA‑GGGGGTAAACAAACAAGGCCTTATCCGGGAGAAGGCCGTGGTATTAGTTGCGGTTCACCACCATAATGATGTGATATCCGGACAGGGTGTGCAGCGGGcccgg                                                                           >  2:1006352/1‑147 (MQ=255)
                                                                            ttAAGTGCGCGCTGAGGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCGTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGt                                                                           <  1:4685678/150‑1 (MQ=255)
                                                                               aGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCgg                                                                        <  1:2758771/150‑1 (MQ=255)
                                                                               aGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCgg                                                                        <  1:734851/150‑1 (MQ=255)
                                                                                    gcgcTGATGCTCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCa                                                                   <  1:845065/150‑1 (MQ=255)
                                                                                    gcgcTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCa                                                                   <  1:291757/150‑1 (MQ=255)
                                                                                      gcTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACAAACAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATACGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGt                                                                 >  2:2902600/1‑150 (MQ=255)
                                                                                      gcTGATGCCCACACCCCCGCCCACACCCACAGGGAGA‑GGGAGAAAACACACAAGGCCTTAACCGGGCGAAGGCCGTGCGGGTAGGTGCGGTACCGCACCGTAATGGTGTGATATCCGGACAGGGGGTGCAGCGGGCCGGTCGGCGCCCGt                                                                 >  2:1588801/1‑150 (MQ=255)
                                                                                        tGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTAc                                                               <  2:3475828/150‑1 (MQ=255)
                                                                                         gATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTAcc                                                              <  1:4382248/150‑1 (MQ=255)
                                                                                               gtCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGTCGGCCTGGCTATTAGTTGCGGTACAGCACCTTCATGATGTGATATCCGAACGGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGAcca                                                        >  2:249133/2‑148 (MQ=255)
                                                                                                  aCCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAagag                                                     >  2:1521861/1‑150 (MQ=255)
                                                                                                   ccccGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAgaga                                                    <  1:76556/150‑1 (MQ=255)
                                                                                                    cccGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCACGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGaa                                                   <  2:4523300/150‑1 (MQ=255)
                                                                                                    cccGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGaa                                                   <  2:4624680/150‑1 (MQ=255)
                                                                                                     ccGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGaaa                                                  >  1:3327659/1‑150 (MQ=255)
                                                                                                      cGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGaaaa                                                 >  2:5006303/1‑150 (MQ=255)
                                                                                                        tcccTCTCCCTGTGGGAGA‑GGGTGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAAcc                                               >  1:3520120/2‑150 (MQ=255)
                                                                                                         cccTCTCCCTGTGGGAGA‑GGGTGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGGACCGGACAAGAGAAAACCa                                              >  1:2864737/1‑150 (MQ=255)
                                                                                                          ccTCTCCCTGTGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCAc                                             >  2:2222053/1‑150 (MQ=255)
                                                                                                          ccTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCAc                                             >  1:3076588/1‑150 (MQ=255)
                                                                                                                  acaGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGa                                     >  2:3456536/1‑150 (MQ=255)
                                                                                                                  acaGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGa                                     >  1:2243201/1‑150 (MQ=255)
                                                                                                                   caGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGaa                                    <  2:902397/150‑1 (MQ=255)
                                                                                                                      ggaga‑gggagaAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGc                                 >  1:349790/1‑150 (MQ=255)
                                                                                                                            gggagaAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGaa                            <  2:3327659/150‑1 (MQ=255)
                                                                                                                             ggagaAAACACTCAAGGCCTTCTCCTGGCGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTGAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGGCGGCGCCAGTACCGGACAAGAGAACACCACTTTATCGAACGCCGGAAc                           >  1:4966640/1‑150 (MQ=255)
                                                                                                                             ggagaAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGAAc                           >  1:4170417/1‑150 (MQ=255)
                                                                                                                             ggagaAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGAAc                           >  1:3849391/1‑150 (MQ=255)
                                                                                                                               agaAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGAACCa                         >  1:1932806/1‑150 (MQ=255)
                                                                                                                                gaAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGAACCAt                        <  2:4886006/150‑1 (MQ=255)
                                                                                                                                  aaaCACTCAAGGCCGTCTCCTGGAGACGGCCTTGCTATTCGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGAACCATCt                      <  1:388798/150‑1 (MQ=255)
                                                                                                                                  aaaCACTCAAGGCCATCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGAACCATCt                      >  1:2499993/1‑150 (MQ=255)
                                                                                                                                        tCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGAACCAGCTGACCCt                >  1:1195651/1‑150 (MQ=255)
                                                                                                                                         cAAGGCCTTCTCCAGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGAACCATCTGACCCTg               >  1:2667969/1‑150 (MQ=255)
                                                                                                                                          aaGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGAACCATCTGACCCTgg              >  2:4717472/1‑150 (MQ=255)
                                                                                                                                          aaGGCCTTCTCCAGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGAACCATCTGACCCTgg              >  1:357840/1‑150 (MQ=255)
                                                                                                                                           aGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGAACCATCTGACCCTGGc             >  2:1694934/1‑150 (MQ=255)
                                                                                                                                            ggCCTTCTCCAGGAGAAGGCATTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGAACCATCTGACCCTGGCg            >  1:2043317/1‑150 (MQ=255)
                                                                                                                                             gCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGAACCATCTGACCCTGGCgg           >  2:2733577/1‑150 (MQ=255)
                                                                                                                                             gCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGAACCATCTGACCCTGGCgg           <  2:4297716/150‑1 (MQ=255)
                                                                                                                                             gCCTTCTCCAGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGAACCATCTGACCCTGGCgg           >  2:1143174/1‑150 (MQ=255)
                                                                                                                                              ccTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGAACCATCTGACCCTGGCGGa          >  2:4431326/1‑150 (MQ=255)
                                                                                                                                              ccTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGAACCATCTGACCCTGGCGGa          >  2:4765909/1‑150 (MQ=255)
                                                                                                                                                 tctcCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGAACCATCTGACCCTGGCGGAAtt       <  1:1521861/150‑1 (MQ=255)
                                                                                                                                                 tctcCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGAACCATCTGACCCTGGCGGAAtt       <  1:2538904/150‑1 (MQ=255)
                                                                                                                                                 tctcCTGGAGAAGGCCTTGCTATTAGGTGCGGTACAGCACCTTAATGATGTGATATCCGACCTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGAACCATCTGACCCTGGCGGAAtt       <  2:4824539/150‑1 (MQ=255)
                                                                                                                                                   tcCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGTCAAGAGAAAACCACTTTATCGAACGCCGGAACCATCTGACCCTGGCGGAATTCa     >  2:3880980/1‑150 (MQ=255)
                                                                                                                                                   tcCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACGGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGAACCATCTGACCCTGGCGGAATTCa     >  2:3001724/1‑150 (MQ=255)
                                                                                                                                                    ccTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGAACCATCTGACCCTGGCGGAATTCAc    <  2:4345725/150‑1 (MQ=255)
                                                                                                                                                     cTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGAACCATCTGACCCTGGCGGAATTCAcc   <  1:92375/150‑1 (MQ=255)
                                                                                                                                                     cTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGAACCATCTGACCCTGGCGGAATTCAcc   >  2:679322/1‑150 (MQ=255)
                                                                                                                                                      tGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATACGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGAACCATCTGACCCTGGCGGAATTCACCt  >  2:3229517/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
GCAGCCATGCGATTGAGCAGGTAGGTAAGAAACTGCGCGGCTATATGACAGATATGAAACGTATTGCTGTTGCGGGTTAAGTGCGCGCTGATGCCCTCACCCCGACCCTCTCCCACAGGGAGA‑GGGAGAAAACACTCAAGGCCTTCTCCTGGAGAAGGCCTTGCTATTAGTTGCGGTACAGCACCTTAATGATGTGATATCCGAACTGGGTGTGCAGCGGGCCGGTCGGCTCCAGTACCGGACAAGAGAAAACCACTTTATCGAACGCCGGAACCATCTGACCCTGGCGGAATTCACCT  >  NC_000913/3959366‑3959664

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑