New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1843797	NA (NA)	8 (0.030)	6/266	NT	NA	noncoding (74/93 nt)	REP131 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP131 (repetitive extragenic palindromic) element; contains 2 REP sequences
	?	NC_000913	= 1843810	NA (NA)					noncoding (87/93 nt)	REP131 (repetitive extragenic palindromic) element; contains 2 REP sequences	REP131 (repetitive extragenic palindromic) element; contains 2 REP sequences

CGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1843645‑1843797 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgggGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCATTTACAACTTAAATCACACCCTGCGCCAGCATCGCATCGGCAACCTTCACAAAACCGGCA  <  NC_000913/1843810‑1843663                                                                                                                                                                                                                                                                                                               CGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCC                                                                                                                                                         >  2:1505466/1‑150  GTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCG                                                                                                                                                        >  2:3033917/1‑150   TGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGG                                                                                                                                                       >  2:3366121/1‑150   TGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGAGTTAAGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACACATGGGCACAATTCATTGCAGTTACGCTCTAAGGTAGGCCGG                                                                                                                                                       >  2:3366237/1‑150                    GCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGGGCGCTGCGCTTGCCC                                                                                                                                      <  1:607404/150‑1                    GCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGGGCGCTGCGCTTGCCC                                                                                                                                      <  1:4127404/150‑1                       GGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGGGCGCTGCGCTTGCCCGGC                                                                                                                                   <  2:5424278/150‑1                         TTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGGGCGCTGCGCTTGCCCGGCCT                                                                                                                                 <  2:180930/150‑1                         TTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGGGCGCTGCGCTTGCCCGGCCT                                                                                                                                 <  2:2400545/150‑1                                         GATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGGGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACT                                                                                                                 <  2:2359781/150‑1                                                     GCGCAGGGTGTGATTTACGGTGTACATGCCTGATGGCGCTACGCTTATCCGGCCTACCATTGGGCACACGTCAGTGCAGTTACGCTCTACTGTAGGCCGGGGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGT                                                                                                     <  2:2745213/150‑1                                                       GCAGGGTGTGATTTATGTTGTAAATGCCTGCTGGCGCGACGCTTTTCAGGCCTACAAAAGGGCACAATTCATTGCAGTTACGCTCTATTTTAGGCCGGGGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGTGC                                                                                                   <  2:1386129/150‑1                                                                                                                                                    GCCGGGGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCATTTACAACTTAAATCACACCCTGCGCCAGCATCGCATCGGCAACCTTCACAAAACC      <  2:3980487/150‑1                                                                                                                                                    GCCGGGGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCATTTACAACTTAAATCACACCCTGCGCCAGCATCGCATCGGCAACCTTCACAAAACC      <  2:3980515/150‑1                                                                                                                                                    GCCGGGGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCATTTACAACTTAAATCACACCCTGCGCCAGCATCGCATCGGCAACCTTCACAAAACC      <  2:4782088/150‑1                                                                                                                                                    GCCGGGGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCATTTACAACTTAAATCACACCCTGCGCCAGCATCGCATCGGCAACCTTCACAAAACC      >  2:1817651/1‑150                                                                                                                                                     CCGGGGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCATTTACAACTTAAATCACACCCTTCGCCAGCATCGCATCGGCAACCTTCACAAAACCG     <  2:5395612/150‑1                                                                                                                                                     CCGGGGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCATTTACAACTTAAATCACACCCTGCGCCAGCATCGCATCGGCAACCTTCACAAAACCG     >  1:2231851/1‑150                                                                                                                                                     CCGGGGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCATTTACAACTTAAATCACACCCTGCGCCAGCATCGCATCGGCAACCTTCACAAAACCG     >  2:2478451/1‑150                                                                                                                                                     CCGGGGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCATTTACAACTTAAATCACACCCTGCGCCAGCATCGCATCGGCAACCTTCACAAAACCG     <  1:1747029/150‑1                                                                                                                                                      CGGGGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCATTTACAACTTAAATCACACCCTGCGCCAGCATCGCATCGGCAACCTTCACAAAACCGG    <  1:5423892/150‑1                                                                                                                                                      CGGGGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCATTTACAACTTAAATCACACCCTGCGCCAGCATCGCATCGGCAACCTTCACAAAACCGG    <  1:4438765/150‑1                                                                                                                                                      CGGGGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCATTTACAACTTAAATCACACCCTGCGCCAGCATCGCATCGGCAACCTTCACAAAACCGG    <  2:3632122/150‑1                                                                                                                                                      CGGGGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCATTTACAACTTAAATCACACCCTGCGCCAGCATCGCATCGGCAACCTTCACAAAACCGG    <  1:3257309/150‑1                                                                                                                                                      CGGGGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCATTTACAACTTAAATCACACCCTGCGCCAGCATCGCATCGGCAACCTTCACAAAACCGG    <  1:3471477/150‑1                                                                                                                                                      CGGGGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCATTTACAACTTAAATCACACCCTGCGCCAGCATCGCATCGGCAACCTTCACAAAACCGG    >  2:4023365/1‑150                                                                                                                                                      CGGGGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCATTTACAACTTAAATCACACCCTGCGCCAGCATCGCATCGGCAACCTTCACAAAACCGG    <  2:4779888/150‑1                                                                                                                                                      CGGGGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCATTTACAACTTAAATCACACACTGCGCCAGCATCGCATCGGCAACCTTCACAAAACCGG    >  2:4023493/1‑150                                                                                                                                                      CGGGGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCAATTACAACATAAATCACACCCTGCGCCAGCATCGCATCGGCAACCTTCACAAAACCGG    <  2:1580050/150‑1                                                                                                                                                       GGGGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCATTTACAACTTAAATCACACCCTGCGCCAGCATCGCATCGGCAACCTTCACAAAACCGGC   <  1:5474683/150‑1                                                                                                                                                       GGGGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCATTTACAACTTAAATCACACCCTGCGCCAGCATCGCATCGGCAACCTTCACAAAACCGGC   >  2:4670586/1‑150                                                                                                                                                       GGGGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCATTTACAACTTAAATCACACCCTGCGCCAGCATCGCATCGGCAACCTTCACAAAACCGGC   >  2:4670441/1‑150                                                                                                                                                        GGGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCATTTACAACTTAAATCACACCCTGCGCCAGCATCGCATCGGCAACCTTCACACAACCGGCA  >  1:4244713/1‑150                                                                                                                                                        GGGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCATTTACAACTTAAATCACACCCTGCGCCAGCATCGCATCGGCAACCTTCACAAAACCGGCA  >  1:3829319/1‑150                                                                                                                                                        GGGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCATTTACAACTTAAATCACACCCTGCGCCAGCATCGCATCGGCAACCTGCACAAAACCGGCA  >  2:886557/1‑150                                                                                                                                                        GGGGCGCTGCGCGTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCATTTACAACTTAAATCACACCCTGCGCCAGCCTCGCATCGGCAACCTTCACAACACCGGCA  >  1:3829309/1‑150                                                                                                                                                                                                                                                                                                               CGTGCAGGGCGCGAACATTGCCGGTTTTGTGAAGGTTGCCGATGCGATGCTGGCGCAGGGTGTGATTTAAGTTGTAAATGCCTGATGGCGCTACGCTTATCAGGCCTACAAATGGGCACAATTCATTGCAGTTACGCTCTAATGTAGGCCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1843645‑1843797 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gccgggGGCGCTGCGCTTGCCCGGCCTACATTAGAGCGTAACTGCAATGAATTGTGCCCATTTGTAGGCCTGATAAGCGTAGCGCCATCAGGCATTTACAACTTAAATCACACCCTGCGCCAGCATCGCATCGGCAACCTTCACAAAACCGGCA  <  NC_000913/1843810‑1843663

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.