| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4434647 | NA (NA) | 7 (0.020) | 4/268 | NT | 1.9% | coding (1919/1944 nt) | cpdB | 2':3'‑cyclic‑nucleotide 2'‑phosphodiesterase |
| ? | NC_000913 | = 4434675 | 368 (1.180) | coding (1891/1944 nt) | cpdB | 2':3'‑cyclic‑nucleotide 2'‑phosphodiesterase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4434494‑4434647‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ataaaGTCGCGACCGATGATATCGGGTTTGCGATTTATCAGGTGGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCATGC < NC_000913/4434675‑4434528 CTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGA < 1:3997447/150‑1CTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGA < 2:1153776/150‑1CTGCCGGAGGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGA < 2:4752231/150‑1 TGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGAT > 2:1669417/1‑150 TGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGAT > 2:4537347/1‑150 TGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGAT < 2:2382327/150‑1 TGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGAT > 1:2744409/1‑150 GCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGATA > 2:3239861/1‑150 CCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGATAA > 1:294213/1‑150 CCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGATAA > 1:799543/1‑150 CCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGATAA > 1:294234/1‑150 CCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGATAA > 1:12490/1‑150 CGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGATAAA < 1:3323373/150‑1 CGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGATAAA > 1:486136/1‑150 CGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGATAAA > 1:3820909/1‑150 CGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGATAAA < 1:385999/150‑1 CGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGATAAA > 2:4231419/1‑150 CGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGATAAA < 1:2325074/150‑1 CTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGATAAAGTCGCGACCGATGATATCGGGTTTGCGATTTATCAG < 2:3251789/150‑1 CTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGATAAAGTCGCGACCGATGATATCGGGTTTGCGATTTATCAG < 1:3534715/150‑1 TGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATACATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGATAAAGTCGCGACCGATGATATCGGGTTTGCGATTTATCATGT < 2:181456/150‑1 TGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGATAAAGTCGCGACCGATGATATCGGGTTTGCGATTTATCAGGT < 1:4246701/150‑1 TGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGATAAAGTCGCGACCGATGATATCGGGTTTGCGATTTATCAGGT < 1:846910/150‑1 GGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGATAAAGTCGCGACCGATGATATCGGGTTTGCGAT > 1:3730273/1‑136 GGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGATAAAGTCGCGACCGATGATATCGGGTTTGCGAT < 2:3730273/136‑1 atccAGTCGCGACCGCTGAGCGCGGGGTTGCGATTTATCAGGTGGATTTGAGTAAGTACAACACTTCTTTTTCGGCCTATAACTCATCCACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCA < 2:1992218/146‑1 ATACAGTCGCGACCGATGATATCGGGTTTGCGATTTATCAGGTGGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATACATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCA < 2:1992169/150‑1 ATAAAGTCGCGACCGATGATATCGGGTTTGCGATTTATCAGGTGGATTTGAGTAAGTCAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCA > 1:5169207/1‑150 ATAAAGTCGCGACCGATGATATCGGGTTTGCGATTTATCAGGTGGATTTGAGTAACTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCA < 1:1804010/150‑1 ATAAAGTCGCGACCGAAGATATCGGGTTTGCGATTTATCAGGTGGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCA < 2:1030617/150‑1 TAAAGTCGCGACCGATGATATCGGGTTTGCGATTTATCAGGTGGATTTGAGTAATTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCAT < 1:4802927/150‑1 TAAAGTCGCGACCGATGATATCGGGTTTGCGATTTATCAGGTGGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCAT < 2:818353/150‑1 TAAAGTCGCGACCGATGATATCGGGTTTGCGATTTATCAGGTGGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCAT < 1:442294/150‑1 TAAAGTCGCGACCGATGATATCGGGTTTGCGATTTATCAGGTGGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCAT < 1:3977593/150‑1 TAAAGTCGCGACCGATGATATCGGGTTTGCGATTTATCAGGTGGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCAT < 1:2509007/150‑1 TAAAGTCGCGACCGATGATATCGGGTTTGCGATTTATCAGGTGGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCAT < 1:2508914/150‑1 TAAAGTCGCGACCGATGATATCGGGTTTGCGATTTATCAGGTGGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCAT < 1:2508822/150‑1 TAAAGTCGCGACCGATGATATCGGGTTTGCGATTTATCAGGTGGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCAT < 1:1340141/150‑1 TAAAGTCGCGACCGATGATATCGGGTTTGCGATTTATCAGGTGGATTTGAGTAAGTAAAACACTTCATTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCAT < 1:4032252/150‑1 TAAAGTCGCGACCGATGATATCGGGTTTGCGATTTATCAGGTGGATTTGAGTAAGAAAAACACTTCTTTTTCGGCCTATAAATCAACAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCAT < 1:4031869/150‑1 TAAAGTCGCGACCGATGAGATCGGGTTTGCGATTTATCAGGTGGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCAT < 2:5025037/150‑1 AAAGTCGCGACCGATGATATCGGGTTTGCGATTTATCAGGTGGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCATG < 2:5075803/150‑1 AAAGTCGCGACCGATGATATCGGGTTTGCGATTTATCAGGTGGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAAACATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCATG < 1:2240897/150‑1 AAGTCGCGACCGATGATATCGGGTTTGCGATTTATCAGGTGGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCATGC < 2:5268781/150‑1 CTGCCGGATGCGCTGAGCTTATCTGGTCTACGGTGCATGGCTTGTAGGGCGGATAAGATGCGCCAGCATCGCATCCGCCAATAAATGCCGGATGCGGTTGATGATTTATAGGCCGAAAAAGAAGTGTTTTACTTACTCAAATCCACCTGATAAA‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4434494‑4434647‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ataaaGTCGCGACCGATGATATCGGGTTTGCGATTTATCAGGTGGATTTGAGTAAGTAAAACACTTCTTTTTCGGCCTATAAATCATCAACCGCATCCGGCATTTATTGGCGGATGCGATGCTGGCGCATCTTATCCGCCCTACAAGCCATGC < NC_000913/4434675‑4434528 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |