| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3785831 | 214 (1.510) | 5 (0.040) | 3/260 | NT | 2.5% | coding (572/1545 nt) | gpmM | phosphoglycero mutase III, cofactor‑independent |
| ? | NC_000913 | = 3785851 | 185 (1.400) | coding (592/1545 nt) | gpmM | phosphoglycero mutase III, cofactor‑independent | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GCTGAACGCGGCGCAGAAAAAATCTACCTGCACGCATTCCTTGACGGTCGCGACACTCCGCCGCGCAGTGCTGAATCCTCGCTGAAAAAATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3785674‑3785831‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctacgcgatCCCAACGGTTATCGCGGTCCATCGCGTAGTAACGACCAATGATGGACGCTACGCGGCCTTTGCCCAGCGCGGCAAATTTTTCTTCGAATTTTTTCAGCGAGGATTCAGCACTGCGCGGCGGAGTGTCGCGACCGTCAAGGAATGCGT < NC_000913/3785851‑3785705 GCTGAACGCGGCGCAGAAAAAATCTACCTGCACGCATTCCTTGACGGTCGCGACACTCCGCCGCGCAGTGCTGAATCCTCGCTGAAAAAATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTAC < 1:972225/150‑1GCTGAACGCGGCGCAGAAAAAATCTACCTGCACGCATTCCTTGACGGTCGCGACACTCCGCCGCGCAGTGCTGAATCCTCGCTGAAAAAATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTAC < 1:1962983/150‑1 CTGAACGCGGCGCAGAAAAAATCTACCTGCACGCATTCCTTGACGGTCGCGACACTCCGCCGCGCAGTGCTGAATCCTCGCTGAAAAAATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACT < 1:732204/150‑1 GAACGCGGCGCAGAAAAAATCTACCTGCACGCATTCCTTGACGGTCGCGACACTCCGCCGCGCAGTGCTGAATCCTCGCTGAAAAAATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTAC < 2:330864/150‑1 GAACGCGGCGCAGAAAAAATCTACCTGCACGCATTCCTTGACGCTCGCGACACTCCGCCGCGCAGTGCTGAATCCTCGCTGAAAAAATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTAC < 2:1906023/150‑1 GCGGCGCAGAAAAAATCTACCTGCACGCATTCCTTGACGGTCGCGACACTCCGCCGCGCAGTGCTGAATCCTCGCTGAAAAAATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGA < 2:1808668/150‑1 GCACGCATTCCTTGACGGTCGCGACACTCCGCCGCGCAGTGCTGAATCCTCGCTGAAAAAATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATCCCAACGGTTATCGCGGTCCA > 2:953767/1‑150 TTGACGGTCGCGACACTCCGCCGCGCAGTGCTGAATCCTCGCTGAAAAAATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATCCCAACGGTTATCGCGGTCCATCGCGTAGTAA < 1:2170181/150‑1 TTGACGGTCGCGACACTCCGCCGCGCAGTGCTGAATCCTCGCTGAAAAAATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATCCCAACGGTTATCGCGGTCCATCGCGTAGTAA < 1:2170182/150‑1 TTGACGGTCGCGACACTCCGCCGCGCAGTGCTGAATCCTCGCTGAAAAAATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATCCCAACGGTTATCGCGGTCCATCGCGTAGTAA < 2:746998/150‑1 TGACGGTCGCGACACTCCGCCGCGCAGTGCTGAATCCTCGCTGAAAAAATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGATCCCAACGGTTATCGCGGTCCATCGCGTAGTAAC < 1:953767/150‑1 CTACGCGATCCCAACGGTTATCGCGGTCCATCGCGTAGTAACGACCAATGATGGACGCTACGCGGCCTTTGCCCAGCGCGGCAAATTTTTCTTCGAATTTTTTCAGCGAGGATTCAGCACTGCGCGGCGGAGTGTCGCGACCGTCAAGGA > 1:1299036/1‑150 TACGCGATCCCAACGGTTATCGCGGTCCATCGCGTAGTAACGACCAATGATGGACGCTACGCGGCCTTTGCCCAGCGCGGCAAATTTTTCTTCGAATTTTTTCAGCGAGGATTCAGCACTGCGCGGCGGAGTGTCGCGACCGTCAAGGAA < 2:2174516/150‑1 TACGCGATCCCAACGGTTATCGCGGTCCATCGCGTAGTAACGACCAATGATGGACGCTACGCGGCCTTTGCCCAGCGCGGCAAATTTTTCTTCGAATTTTTTCAGCGAGGATTCAGCACTGCGCGGCGGAGTGTCGCGACCGTCAAGGAA < 2:951951/150‑1 TACGCGATCCCAACGGTTATCGCGGTCCATCGCGTAGTAACGACCAATGATGGACGCTACGCGGCCTTTGCCCAGCGCGGCAAATTTTTCTTCGAATTTTTTCAGCGAGGATTCAGCACTGCGCGGCGGAGTGTCGCGACCGTCAAGGAA < 2:232447/150‑1 TACGCGATCCCAACGGTTATCGCGGTCCATCGCGTAGTAACGACCAATGATGGACGCTACGCGGCCTTTGCCCAGCGCGGCAAATTTTTCTTCGAATTTTTTCAGCGAGGATTCAGCACTGCGCGGCGGAGTGTCGCGACCGTCAAGGAA < 2:2319292/150‑1 TACGCGATCCCAACGGTTATCGCGGTCCATCGCGTAGTAACGACCAATGATGGACGCTACGCGGCCTTTGCCCAGCGCGGCAAATTTTTCTTCGAATTTTTTCAGCGAGGATTCAGCACTGCGCGGCGGAGTGTCGCGACCGTCAAGGAA < 2:2246925/150‑1 TACGCGATCCCAACGGTTATCGCGGTCCATCGCGTAGTAACGACCAATGATGGACGCTACGCGGCCTTTGCCCAGCGCGGCAAATTTTTCTTCGAATTTTTTCAGCGAGGATTCAGCACTGCGCGGCGGAGTGTCGCGACCATCAAGGAA > 2:453859/1‑150 ACGCGATCCCAACGGTTATCGCGGTCCATCGCGTAGTAACGACCAATGATGGACGCTACGCGGCCTTTGCCCAGCGCGGCAAATTTTTCTTCGAATTTTTTCAGCGAGGATTCAGCACTGCGCGGCGGAGTGTCGCGACCGTCAAGGAAT < 2:247775/150‑1 ACGCGATCCCAACGGTTATCGCGGTCCATCGCGTAGTAACGACCAATGATGGACGCTACGCGGCCTTTGCCCAGCGCGGCAAATTTTTCTTCGAATTTTTTCAGCGAGGATTCAGCACTGCGCGGCGGAGTGTCGCGACCGTCAAGGAAT < 2:247787/150‑1 GCGATCCCAACGGTTATCGCGGTCCATCGCGTAGTAACGACCAATGATGGACGCTACGCGGCCTTTGCCCATCGCGGCAAATTTTTCTTCGAATTTTTTCAGCGAGGATTCAGCACTGCGCGGCGGAGTGTCGCGACCGTCAAGGAATGC > 1:1474240/1‑150 GCGATCCCAACGGTTATCGCGGTCCATCGCGTAGTAACGACCAATGATGGACGCTACGCGGCCTTTGCCCAGCGCGGCAAATTTTTCTTCGAATTTTTTCAGCGAGGATTCAGCACTGCGCGGCGGAGTGTCGCGACCGTCAAGGAATGC < 1:2225529/150‑1 GCGATCCCAACGGTTATCGCGGTCCATCGCGTAGTAACGACCAATGATGGACGCTACGCGGCCTTTGCCCAGCGCGGCAAATTTTTCTTCGAATTTTTTCAGCGAGGATTCAGCACTGCGCGGCGGAGTGTCGCGACCGTCAAGGAATGC > 2:841379/1‑150 GCGATCCCAACGGTTATCGCGGTCCATCGCGTAGTAACGACCAATGATGGACGCTACGCGGCCTTTGCCCAGCGCGGCAAATTTTTCTTCGAATTTTTTCAGCGAGGATTCAGCACTGCGCGGCGGAGTGTCGCGACCGTCAAGGAATGC > 2:841354/1‑150 GCGATCCCAACGGTTATCGCGGTCCATCGCGTAGTAACGACCAATGATGGACGCTACGCGGCCTTTGCCCAGCGCGGCAAATTTTTCTTCGAATTTTTTCAGCGAGGATTCAGCACTGCGCGGCGGAGTGTCGCGACCGTCAAGGAATGC > 1:63737/1‑150 GCGATCCCAACGGTTATCGCGGTCCATCGCGTAGTAACGACCAATGATGGACGCTACGCGGCCTTTGCCCAGCGCGGCAAATTTTTCTTCGAATTTTTTCAGCGAGGATTCAGCACTGCGCGGCGGAGTGTCGCGACCGTCAAGGAATGC < 2:471283/150‑1 GCGATCCCAACGGTTATCGCGGTCCATCGCGTAGTAACGACCAATGATGGACGCTACGCGGCCTTTGCCCAGCGCGGCAAATTTTTCTTCGAATTTTTTCAGCGAGGATTCAGCACTGCGCGGCGGAGTGTCGCGACCGTCAAGGAATGC < 1:2225646/150‑1 GCGATCCCAACGGTTATCGCGGTCCATCGCGTAGTAACGACCAATGATGGACGCTACGCGGCCTTTACCCAGCGCGGCAAATTTTTCTTCGAATTTTTTCAGCGAGGATTCAGCACTGCGCGGCGGAGTGTCGCGACCGTCAAGGAATGC > 1:1500660/1‑150 CGATCCCAACGGTTATCGCGGTCCATCGCGTAGTAACGACCAATGATGGACGCTACGCGGCCTTTGCCCAGCGCGGCAAATTTTTCTTCGAATTTTTTCAGCGAGGATTCAGCACTGCGCGGCGGAGTGTCGCGACCGTCAAGGACTGCG > 2:1964940/1‑150 CGATCCCAACGGTTATCGCGGTCCATCGCGTAGTAACGACCAATGATGGACGCTACGCGGCCTTTGCCCAGCGCGGCAAATTTTTCTTCGAATGTTTTCAGCGAGGATTCAGCACTGCGCGGCGGAGTGTCGCGACCGTCAAGGAATGCG > 2:1920802/1‑150 GATCCCAACGGTTATCGCGGTCCATCGCGTAGTAACGACCAATGATGGACGCTACGCGGCCTTTGCCCAGCGCGGCAAATTTTTCTTCGAATTTTTTCAGCGAGGATTCAGCACTGCGCGGCGGAGTGTCGCGACCGTCAAGGAATGCGT > 1:121062/1‑150 GATCCCAACGGTTATCGCGGTCCATCGCGTAGTAACGACCAATGATGGACGCTACGCGGCCTTTGCCCAGCGCGGCAAATTTTTCTTCGAATTTTTTCAGCGAGGATTCAGCACTGCGCGGCGGAGTGTCGCGACCGTCAAGGAATGCGT > 1:684668/1‑150 GATCCCAACGGTTATCGCGGTCCATCGCGTAGTAACGACCAATGATGGACGCTACGCGGCCTTTGCCCAGCGCGGCAAATTTTTCTTCGAATTTTTTCAGCGAGGATTCAGCACTGCGCGGCGGAGTGTCGCGACCGTCAAGGAATGCGT > 1:1756744/1‑150 GATCCCAACGGTTATCGCGGTCCATCGCGTAGTAACGACCAATGATGGACGCTACGCGGCCTTTGCCCAGCGCGGCAAATTTTTCTTCGAATTTTTTCAGCGAGGATTCAGCACTGCGCGGCGGAGTGTCGCGACCGTCAAGGAATGCGT > 1:2079541/1‑150 GATCCCAACGGTTATCGCGGTCCATCGCGTAGTAACGACCAATGATGGACGCTACGCGGCCTTTGCCCAGCGCGGCAAATTTTTCTTCGAATTTTTTCAGCGAGGATTCAGCACTGCGCGGCGGAGTGTCGCGACCGTCAAGGAATGCGT > 1:1332536/1‑150 GCTGAACGCGGCGCAGAAAAAATCTACCTGCACGCATTCCTTGACGGTCGCGACACTCCGCCGCGCAGTGCTGAATCCTCGCTGAAAAAATTCGAAGAAAAATTTGCCGCGCTGGGCAAAGGCCGCGTAGCGTCCATCATTGGTCGTTACTACGCGAT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3785674‑3785831‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ctacgcgatCCCAACGGTTATCGCGGTCCATCGCGTAGTAACGACCAATGATGGACGCTACGCGGCCTTTGCCCAGCGCGGCAAATTTTTCTTCGAATTTTTTCAGCGAGGATTCAGCACTGCGCGGCGGAGTGTCGCGACCGTCAAGGAATGCGT < NC_000913/3785851‑3785705 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |