| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,720,364 | G→T | 6.6% | intergenic (+21/+26) | slyB → / ← slyA | outer membrane lipoprotein/global transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,720,364 | 0 | G | T | 6.6% | 1215.4 / 16.3 | 385 | intergenic (+21/+26) | slyB/slyA | outer membrane lipoprotein/global transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (221/123); new base T (2/39); total (223/162) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.81e-14 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 402 total aligned reads displayed.
CTGGAAATTCGTAAAGACGATGGTAATACCATCATGGTG‑GTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGTTTTGTTAATAACAGCT > NC_000913/1720215‑1720513 | gAAATTCGTAAAGACGATGGTAATACCATCATGGTG‑GTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCCGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGttc > 2:2710112/1‑149 (MQ=255) gAAATTCGTAAAGACGATGGTAATACCATCATGGTG‑GTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTa < 2:395537/150‑1 (MQ=255) gAAATTCGTAAAGACGATGGTAATACCATCATGGTG‑GTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTa < 2:4592005/150‑1 (MQ=255) gAAATTCGTAAAGACGATGGTAATACCATCATGGTG‑GTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTa < 1:6253028/150‑1 (MQ=255) aaTTCGTAAAGACGATGGTAATACCATCATGGTG‑GTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACt > 1:2406753/1‑150 (MQ=255) ttCGTAAAGACGATGGTAATACCATCATGGTG‑GTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGa < 1:8693644/150‑1 (MQ=255) tCGTAAAGACGATGGTAATACCATCATGGTG‑GTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGAc < 1:7451522/150‑1 (MQ=255) tCGTAAAGACGATGGTAATACCATCATGGTG‑GTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGAc < 1:5648386/150‑1 (MQ=255) gTAAAGACGATGGTAATACCATCATGGTG‑GTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACca < 2:6471918/150‑1 (MQ=255) gTAAAGACGATGGTAATACCATCATGGTG‑GTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACca < 1:3662798/150‑1 (MQ=255) tAAAGACGATGGTAATACCATCATGGTG‑GTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACcac > 2:8557882/1‑150 (MQ=255) tAAAGACGATGGTAATACCATCATGGTG‑GTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACcac < 2:2525663/150‑1 (MQ=255) aaaGACGATGGTAATACCATCATGGTG‑GTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACcaca < 1:203822/150‑1 (MQ=255) gTAATACCATCATGGTG‑GTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTc > 1:10035088/1‑150 (MQ=255) aaTACCTTCATGGTG‑GTACATAAACAAGGCAACAGTCGTTTCTC‑GCGGGGCAAC‑GTTGTCTTACTGGCCTGCAATGGCAGTCTGGTGACCGTTTCTCCGCGCTAAATACTTTTGCG‑TGTGTTCTGGTTACTGACCCCACGCCCCCTTCAt < 2:7393875/150‑1 (MQ=255) tACCATCA‑GGTGTGTACAGAACCACGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCCGTCAGGTGACGGTTTCTCCGCGCTAATTAAGTTTGCG‑TGTGGTCAGGTTAGTGACCACACGCCCCCTTCAtgt < 2:7542032/150‑3 (MQ=255) catcatGGTG‑GTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCAc > 2:7625776/1‑150 (MQ=255) tcatGGTG‑GTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCAccc > 2:1260752/1‑150 (MQ=255) tcatGGTG‑GTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCAccc > 2:1864244/1‑150 (MQ=255) tcatGGTG‑GTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCAccc > 2:5146267/1‑150 (MQ=255) ttgttg‑gtACATAAACATGGAAACACTCTTTTCTCTCGGGGCAAAG‑T‑TGTGTTACTGGCAAGAATTGGCTGTCTGGTGACGTTTTCTCCGCGCTAAATATTTTTGGG‑TGTGGTCAGTTTACTGACCACACGCCCCCTTCATTTCACCCtt < 2:2314426/146‑1 (MQ=255) tggtg‑gTACAGAAACAAGGCAACCCTGGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCATTTGCTGTCAGGTGACCGTTTCTCCGCGCTAAATATGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCttt < 2:1474100/150‑1 (MQ=255) gtg‑gtACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTgg > 1:7641273/1‑150 (MQ=255) tg‑gtACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGc > 1:1642446/1‑150 (MQ=255) gg‑gtACTGACACCCGGCACCACTCGTTTCTGTCGGGGCCAAG‑G‑TGGCGTAGGGGCCTGCCATGGCTGTCAGGTGAGCGTTTCGCCGGGTTACCTATGTGTGGG‑TGGGGGCAGTTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGc < 2:3358635/149‑1 (MQ=255) gtACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCt > 2:7837005/1‑150 (MQ=255) gtACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATATCACCCTTTGGCCt > 1:512448/1‑150 (MQ=255) tACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTg > 1:4089904/1‑150 (MQ=255) aCAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGt > 2:5502540/1‑150 (MQ=255) cAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTa > 2:2812972/1‑150 (MQ=255) aGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTaa > 1:6432069/1‑150 (MQ=255) aGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTaa > 1:3236942/1‑150 (MQ=255) aGAAACAAGGCAACACTCGGTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACGGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTac > 1:2647732/1‑149 (MQ=255) aaaCAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACt > 2:10221030/1‑150 (MQ=255) aCAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCa > 2:5087014/1‑150 (MQ=255) aCAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCa > 1:4948071/1‑150 (MQ=255) cacggCAACCCGCGTTTCTCTCCGGGCCAAG‑G‑TGTGTTAGTGGCCAGCAATGGATGTGTGGTGACCGTTTCACCGCGCTAAATAAGTTGGGG‑TGTGGTCATTTTACTGACCCCACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCaa < 2:7081277/147‑1 (MQ=255) aaGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAAt > 1:4450711/1‑150 (MQ=255) aGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATg > 1:9801834/1‑150 (MQ=255) gCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGat > 2:7292020/1‑150 (MQ=255) aaCACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTCCTGGCCAGCACTGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGatat > 1:1472239/1‑150 (MQ=255) acTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGAtattct > 2:9019495/1‑148 (MQ=255) acTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGAAACTCAATGAtattat > 1:6726316/1‑150 (MQ=255) gTTTCTCTCGGGGCAACC‑G‑TGTGGTTCTGGCCTGCAATGGCTGTCTGGGTACCGTTTCTCCGCGCTAAATAAGTTGGGG‑TGTTGTCAGTTTACTGACAACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTc < 2:5966760/150‑1 (MQ=255) gTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGTAACCTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTc > 1:7340609/1‑150 (MQ=255) ctctcCGGGCCATG‑G‑GGTGGTACTGCCCCGAATTGCCTGTCCGTTTACCGTTTCTCCGCGCTAAAT‑TGTTTGGGTTGTGTTCTGTTTACGCCCCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGt < 2:2977432/150‑1 (MQ=255) tctcCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGtt > 2:7185126/1‑150 (MQ=255) cGGGCCCACGG‑TTTCGTAGTGGCCAGCATTGTCCGTGCGGGGCCTTTTTCGCCGCTATAAATATGTTTGCG‑TGTGGACTGTTTCCTGCACACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTg < 2:3579334/150‑1 (MQ=255) gCCACC‑G‑TGTCGTACTGGCCAGCAAGGGCAGTCCGGTGACGGTTTCTCCGCGCTAAATATGTTTGGG‑TGTGGTCTGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGAt < 2:2406753/150‑1 (MQ=255) cAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGa > 1:9669413/1‑150 (MQ=255) aaC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAg > 1:5934311/1‑150 (MQ=255) tACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAg > 2:8000982/1‑150 (MQ=255) aCTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAGGTTTTGCGATGAGCGTAATCAGt > 1:10109080/1‑150 (MQ=255) aCTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGt > 2:6832710/1‑150 (MQ=255) tGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTg > 1:8239257/1‑150 (MQ=255) gCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCt > 1:4650868/1‑150 (MQ=255) gCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCt > 2:5834961/1‑150 (MQ=255) gCCAGCAATGCCAGTCAGGTCACCGATTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCAGGGCACCCTGTGGCCTGTAACTCCATGATCTTATGCTCCAGGGTTGCGATGAGCGTACTCAGTTGCt > 2:8826113/1‑150 (MQ=255) ccAGCATGGGCAGTCTGGGGACCGTTACCCCGGGATAAATAGGTTTGCG‑TGTGGTCTGTTTACGGCCCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTc < 2:1058280/150‑1 (MQ=255) ccAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCGGTGGCCTGTAACTCAATGATATTATGCTCAAGTGTTGCGATGAGCGTAATCAGGTGCTc > 2:5239457/1‑150 (MQ=255) cAGCACTGGCTGTCTGGTGACGTTTTCTCCGCGCTAAATATGTTTGGG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTcc < 2:8315704/150‑1 (MQ=255) cAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTcc > 1:518145/1‑150 (MQ=255) aGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCa > 2:9549826/1‑150 (MQ=255) cAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGt > 2:5620103/1‑150 (MQ=255) ggCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCct > 2:8619575/1‑150 (MQ=255) cAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCctct > 2:6317374/1‑150 (MQ=255) aGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCGTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTg > 1:7966155/1‑150 (MQ=255) tCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCg < 2:9352616/150‑1 (MQ=255) tggTGCCCGTTTCTCCGCGATAAATATGTTTGCG‑TGTGGTCTGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGga < 1:9963120/149‑1 (MQ=255) gtgccgttttCCCCGCTCTAAATATGTTGGCG‑TGTGGTCTGGTAACTCCCCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGgaga < 1:1943287/143‑1 (MQ=255) gagcccGTTTCGCCGCGAAAATCACGTTGGCG‑TGGGGTGGGGTTACTCCCCCCACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGgaga < 1:2864151/146‑1 (MQ=255) gTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGgaga > 2:773983/1‑150 (MQ=255) tgcccGTTTCTCCGCGCTAAATAAGTTGGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGAt < 2:1723398/147‑1 (MQ=255) tGACCGTTTCTCCGCGATAAATAAGTTTGGG‑TGTGGTCTGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGAt < 2:7034792/150‑1 (MQ=255) cGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGGGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGTTGCCa > 1:9066176/1‑150 (MQ=255) cGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCa > 2:4222444/1‑150 (MQ=255) gTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCGTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTTCGATGTGCGTAATCAGTTGCTCCAGTTCCTATGCGGAGATGCCAt > 1:9466140/1‑150 (MQ=255) tctcCGCGCTAAATTTGTTTGGT‑TGTGTTCTGTTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTa < 1:7528312/150‑1 (MQ=255) cgcgCTAAATATGTGGTCG‑TGTGTTAAGTTAACTGACCCCACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTACTCTGCGGAGATGCCATGTAatat < 1:10284982/150‑1 (MQ=255) aaaTATGTTTGCG‑TGTGGTCTGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCcgc < 2:3237178/150‑1 (MQ=255) aaaTAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCcgc < 2:1626886/150‑1 (MQ=255) ttatttttGCG‑TGTGGTCAGGTTACTTACCACACGCCCCCTTCATTTCACCCTTGGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCcgcgc < 2:6726316/145‑1 (MQ=255) atttttttGGG‑GGTGGTATGGTTAGTCACCCCACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCcgcgc < 1:3088032/145‑1 (MQ=255) aTAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTACTCTTTCcgcgc > 2:8352214/1‑150 (MQ=255) ttttttGGG‑TGTGGTCCGGTTAGTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCgg < 2:3851284/147‑1 (MQ=255) aGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCggg > 2:6597770/1‑150 (MQ=255) tggg‑tgtGGTCTGGTTAGTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGtttt < 2:3125633/147‑1 (MQ=255) tGCG‑TGTGGTCTGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGtttt < 2:492347/150‑1 (MQ=255) gg‑tgtgtTCTGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGTTTTGt < 2:518145/149‑1 (MQ=255) tgGTCAGTTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGTTTTGTtaat < 2:432161/150‑1 (MQ=255) gggTCTGGTTACTCACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGTTTTGTtaat < 1:3515300/149‑1 (MQ=255) gTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTACTATTTCCGCGCGGGTTTTGTtaataa > 2:8118838/1‑150 (MQ=255) gTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGTTTTGTtaataa > 2:3502964/1‑150 (MQ=255) gTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGTTTTGTtaataa > 2:6166590/1‑150 (MQ=255) gTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGTTTTGTtaataa > 2:9156903/1‑150 (MQ=255) tCAGGTTACTGACCACACGCCCCCTTCATTTCAACCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGAGATGAGCGGAATCAGTTGCTCCAGTTCCTCTGCTGAGATGCCATGTAATATTTCCGCGCGGGTTTTGTTAATAAc > 1:70012/1‑150 (MQ=255) gTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGTTTTGTTAATAACAGCt > 2:1580359/1‑150 (MQ=255) gTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGTTTTGTTAATAACAGCt < 1:8348995/150‑1 (MQ=255) gTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGTTTTGTTAATAACAGCt > 2:4432417/1‑150 (MQ=255) gTTACGGACCCCACGCCCCCTGCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGTTTTGTTAATAACAGCt < 2:5335116/150‑1 (MQ=255) | CTGGAAATTCGTAAAGACGATGGTAATACCATCATGGTG‑GTACAGAAACAAGGCAACACTCGTTTCTCTCCGGGCCAAC‑G‑TGTCGTACTGGCCAGCAATGGCAGTCAGGTGACCGTTTCTCCGCGCTAAATAAGTTTGCG‑TGTGGTCAGGTTACTGACCACACGCCCCCTTCATTTCACCCTTTGGCCTGTAACTCAATGATATTATGCTCAAGTTTTGCGATGAGCGTAATCAGTTGCTCCAGTTCCTCTGCGGAGATGCCATGTAATATTTCCGCGCGGGTTTTGTTAATAACAGCT > NC_000913/1720215‑1720513 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |