Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 2,470,436 C→A 8.6% Q436K (CAA→AAA)  gtrS → serotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,470,4360CA 8.6% 1252.3 / 28.4 409Q436K (CAA→AAA) gtrSserotype‑specific glucosyl transferase, CPS‑53 (KpLE1) prophage
Reads supporting (aligned to +/- strand):  ref base C (152/206);  new base A (47/4);  total (199/210)
Fisher's exact test for biased strand distribution p-value = 4.88e-12
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 419 total aligned reads displayed.

CTCTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCGT  >  NC_000913/2470287‑2470585
                                                                                                                                                      |                                                                                                                                                     
 tctTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCa                                                                                                                                                      <  2:1243692/150‑1 (MQ=255)
   tttttGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATTAAATAAGTCAAAGAAATCaaa                                                                                                                                                    >  2:4018938/1‑149 (MQ=255)
   tttttGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTAAAAtaaataaat                                                                                                                                                    >  1:4276311/1‑149 (MQ=255)
   tttttGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAAAAATTAAAAGAAAACAAg                                                                                                                                                    >  1:5561370/1‑150 (MQ=255)
    ttttGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGa                                                                                                                                                   <  1:9978337/150‑1 (MQ=255)
    ttttGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGa                                                                                                                                                   <  1:6022318/150‑1 (MQ=255)
    ttttGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTAAAATAAATCAAGa                                                                                                                                                   >  2:4205498/1‑150 (MQ=255)
    ttgtGGAAGATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGa                                                                                                                                                   <  2:7886394/147‑1 (MQ=255)
        ggAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTAAAATAAAAAAAGaaaaa                                                                                                                                               >  2:4748087/1‑149 (MQ=255)
         gAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATa                                                                                                                                              <  1:1372656/150‑1 (MQ=255)
         gAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAAATTATAAAATAAATCAAATAAAACAATACaaaa                                                                                                                                              >  2:3607988/1‑148 (MQ=255)
              tctcAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGAt                                                                                                                                         <  1:4483021/150‑1 (MQ=255)
                tcAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAAACAAGACAAAAGCGATGt                                                                                                                                       >  2:7704122/1‑150 (MQ=255)
                   aTTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTaaa                                                                                                                                    <  1:2330883/150‑1 (MQ=255)
                    ttttATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAg                                                                                                                                   <  1:640261/150‑1 (MQ=255)
                     tttATGTGTCATTTTTCGGGGAAGGATATATAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCTACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGc                                                                                                                                  <  1:10141742/150‑1 (MQ=255)
                      ttATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCa                                                                                                                                 <  2:2671871/150‑1 (MQ=255)
                        aTGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACt                                                                                                                               <  2:2831371/150‑1 (MQ=255)
                        aTGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACt                                                                                                                               <  2:3554669/150‑1 (MQ=255)
                          gtgtCATTTTTCGGGGAAGGATATAGAGATTTAAGCAATCATTTATTTGGAATGTATTTTTCTTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTaa                                                                                                                             <  2:4816742/150‑1 (MQ=255)
                            gtCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTAAAAGAAAACAAGACAAAAGCGATGTAAAGCACTAAGt                                                                                                                           >  1:1723251/1‑150 (MQ=255)
                             tCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGtt                                                                                                                          <  1:3145063/150‑1 (MQ=255)
                               ttttttCGGGGATGGATATCGTGATTTAAGCAAGCATGTAGTGGGTATGTATTGTTCGTTCGACCTGTGCTTATACATAACAGTCGT‑TTTTTTTTTTTCTTAAATTATTCACAGAAATCATGAGAATAGCGATGTAAAGCTCTACGTTTa                                                                                                                        <  2:7020891/149‑1 (MQ=255)
                               aTTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAAAAATTAAAAGAAAACAACAAAAAAACGATGTAAAGCCCAAACTTTa                                                                                                                        >  1:2124065/1‑150 (MQ=255)
                               aTTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTACGTTCGACCTATGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAAATCAAACAAATCAAGACAAAAGCGATGTAAAACAAAAAGTTTa                                                                                                                        >  2:8238111/1‑150 (MQ=255)
                                tttttCGGTGAATGATATAGAGTTTTTAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGATATCAAGACAATTGCGATGTAAAGCACTTATTTTaa                                                                                                                       <  2:5464190/150‑1 (MQ=255)
                                 ttttCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATTTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGAAGTAAAGCACTAAGTTTaaa                                                                                                                      <  2:3348569/150‑1 (MQ=255)
                                               tataGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACCTAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCa                                                                                                        <  2:1684521/150‑1 (MQ=255)
                                                  agagATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATgg                                                                                                     <  1:5775419/150‑1 (MQ=255)
                                                   gagaTTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGgc                                                                                                    <  2:4933341/150‑1 (MQ=255)
                                                     gaTTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGgcgc                                                                                                  <  1:10038657/150‑1 (MQ=255)
                                                         tAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑GTTTTTAATTTATAAAAAAAATAAAAGAAAAAAAGACAAAAGCGATGTAAAGCACAAAGTTTAAATTGAGCGCCACAAATGgcgcgccc                                                                                              >  2:9507183/1‑148 (MQ=255)
                                                          aagcaagcATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGTGTTTTTTAATTT‑TAAAAAAAATTAAAGAAAAAAAGAAAAAAGACATGTTAATCAAGAAAATTAAAAATCGCGCCCAAAGAGGCGCGcaca                                                                                             >  1:8619492/1‑150 (MQ=255)
                                                             caagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAAATAAAAGAAATAAATAAAAAATCGATTTAAATCAAAAATTTTAAATTGATCGCCAATAATTGCGCGCACAAGc                                                                                          >  2:8357408/1‑150 (MQ=255)
                                                              aagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCt                                                                                         >  2:746080/1‑150 (MQ=255)
                                                              aagcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAAATTATAAAAAAATTCAAATAAATAAACACAAAAGCGATGTAAATCACTAAGTTTAAATTTAGCGCCAATCAAGGCGCGCACAAGca                                                                                         >  2:3125394/1‑149 (MQ=255)
                                                               agcaTTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑GTTTTTTATTTTTAAAAAAATTAAAAAAAATAAAGAAAAAATCGATTTTAAGCAATGAGTTTTAATTTAGCGCCACACAATGCGCGCCCCAGcga                                                                                        >  1:6574345/1‑148 (MQ=255)
                                                                  atttatttGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAAAAGCGAGGTAAAGCACTAAGTTTAAATTGCGCGCCAAACAAGGCGCGCCCAAGCTataa                                                                                     >  2:300139/1‑150 (MQ=255)
                                                                       tttGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑GTTTTTTATTTATTAAAAAATTAAAAAAAAAAAAAAAAAAAGCGATGTTAAACACAAAATTTAAATTTAGCGCCAAAAAGGGCGCGCCCAAGCTataaaaaca                                                                                >  1:4146299/1‑145 (MQ=255)
                                                                          ggAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAAAAATTCAAATAAATCAAGACAATAGCGATGTAAAGCACAAAGTTTAAATTGCGCGCCAATCAAGGCGCGCACAAGCTATAATACCAAcc                                                                             >  2:1460757/1‑150 (MQ=255)
                                                                                tATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAAttt                                                                       <  2:1325860/150‑1 (MQ=255)
                                                                                  tttttCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAAAAATTCAAAGAAATCAAGACAATATCGATGTAAAGCACTAAGGTTAAATTGCGCGCCAAACATGGCGCGCACAAGCTATTAAACCCACCTAATTtct                                                                     >  2:8431470/1‑150 (MQ=255)
                                                                                      tcgttcgACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTctcctc                                                                 <  2:876166/150‑1 (MQ=255)
                                                                                         ttcgACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTctcctcctc                                                              >  2:9198150/1‑150 (MQ=255)
                                                                                          tcgACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCctct                                                             <  2:7061411/150‑1 (MQ=255)
                                                                                            gACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCAATAATAACAACCTAAATTATCCTCCTCTTa                                                           >  2:5142221/1‑150 (MQ=255)
                                                                                              ccTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATAAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCAAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTaga                                                         <  1:3673755/150‑1 (MQ=255)
                                                                                               cTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAAAAGCGATGTAAAGCACTAAGTTTAAATTTCGCGCCAATCATGGCGCGCACAAGCTATAATAACAACCAAAATTATCCTCCACTTatag                                                        >  2:1417698/1‑150 (MQ=255)
                                                                                                tttGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAAAAGCGATGTAAAGCACTAAGTTTAAATTTCGCGCCAATCATGGCGCGCCCACGCTATAAAACCCACCTAAATTATCCTCCTCTTagagg                                                       >  2:6362175/1‑149 (MQ=255)
                                                                                                tttGCTTATACAAAACAGTCTT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGt                                                       <  1:7798318/150‑1 (MQ=255)
                                                                                                  tgattATCCATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGa                                                     <  1:4724639/147‑1 (MQ=255)
                                                                                                  tGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAATAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGa                                                     <  1:1139993/150‑1 (MQ=255)
                                                                                                  tGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGa                                                     <  1:7193427/150‑1 (MQ=255)
                                                                                                   gCTTATACATAACAGTCTT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGAc                                                    <  1:194120/150‑1 (MQ=255)
                                                                                                   gCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGAc                                                    <  1:7395568/150‑1 (MQ=255)
                                                                                                   gCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGAc                                                    <  1:5851478/150‑1 (MQ=255)
                                                                                                        taCATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTatat                                               <  2:6005238/150‑1 (MQ=255)
                                                                                                          cATAACAGTCGT‑TTTTTTAATTTATAAAAAAAATCAAAGAAATAAAGACAAAAGCGATGTAAAGAACTAAGTTTAAAATGCGCGCCAATCAAGGCGCGCACAAACTATAATAACAACCTAATTTATACAACTCATAGAGTGACaataaaa                                             >  2:8213081/1‑147 (MQ=255)
                                                                                                           aTAACAGTCGT‑TTTTTTAATTTATAAAAAAATTAAAATAAAAAAAGACAAAAGCGCTGTTAAGCACTAAGTTTTAAATGCGCGCCAAACATGGCGCGCACAAGCTATAAAAACAAACAAAATTCTAATCCGCGTAGAGGTACTatatata                                            >  2:9588061/1‑147 (MQ=255)
                                                                                                            tAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTcc                                           <  1:4916999/150‑1 (MQ=255)
                                                                                                            tAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTcc                                           <  1:7560722/150‑1 (MQ=255)
                                                                                                            tAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTcc                                           <  2:5807017/150‑1 (MQ=255)
                                                                                                             aaCAGTCGT‑TTTTTTAATTTATAAAATAATTAAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATAATTGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCACCt                                          >  2:688036/1‑150 (MQ=255)
                                                                                                             aaCAGTCGT‑TTTTTTAATTTATAAAATAATTAAAAGAAATCAAGACAAAATCGATGTAAATCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCAAAATTCTACACCTCTTATAGTGACTATATCGCCt                                          >  2:8599103/1‑150 (MQ=255)
                                                                                                               cAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGa                                        <  2:7168857/150‑1 (MQ=255)
                                                                                                                  tCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAg                                     <  2:6582668/150‑1 (MQ=255)
                                                                                                                    gT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCACTCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGaa                                   <  1:2579958/150‑1 (MQ=255)
                                                                                                                    gT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGaa                                   >  2:4317166/1‑150 (MQ=255)
                                                                                                                        tttttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTg                                <  2:2130382/150‑1 (MQ=255)
                                                                                                                          tttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCg                              <  2:8528135/150‑1 (MQ=255)
                                                                                                                          tttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCg                              <  1:3001603/150‑1 (MQ=255)
                                                                                                                          tttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCg                              <  1:3951198/150‑1 (MQ=255)
                                                                                                                          tttAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCg                              <  1:5151917/150‑1 (MQ=255)
                                                                                                                              aTTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTAt                          >  1:8250615/1‑150 (MQ=255)
                                                                                                                               tttATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTAtt                         <  1:2216385/150‑1 (MQ=255)
                                                                                                                               tacataAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTAtt                         <  2:6159373/147‑1 (MQ=255)
                                                                                                                                ttATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTg                        >  1:4615789/1‑150 (MQ=255)
                                                                                                                                ttATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTg                        >  2:2261770/1‑150 (MQ=255)
                                                                                                                                 tataAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGa                       <  1:10125207/150‑1 (MQ=255)
                                                                                                                                 tataAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGa                       >  2:1074661/1‑150 (MQ=255)
                                                                                                                                  ataAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGAc                      >  2:8143879/1‑150 (MQ=255)
                                                                                                                                       ataatTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCa                 >  2:2066699/1‑150 (MQ=255)
                                                                                                                                           ttCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATg             >  2:8897562/1‑150 (MQ=255)
                                                                                                                                            tCAAAGAAATCAAGACAATAGCGATGTAATGCACTAAGTTTAAATTGCGCGCCACTCATGGCGCGCACCAGCTATAATACCAACCTAAGTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTCTCAAATGc            >  1:3555179/1‑150 (MQ=255)
                                                                                                                                            tCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGc            <  2:3770844/150‑1 (MQ=255)
                                                                                                                                             cAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGcc           <  1:7936556/150‑1 (MQ=255)
                                                                                                                                             aaaaGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGcc           <  1:8891976/149‑1 (MQ=255)
                                                                                                                                              aaaGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCTCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGccc          >  1:6164354/1‑150 (MQ=255)
                                                                                                                                              aaaGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGccc          <  2:7618836/150‑1 (MQ=255)
                                                                                                                                              aaaGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGccc          >  1:9682830/1‑150 (MQ=255)
                                                                                                                                              aaaGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAAGTGCGGTATTGACTATCAAATGccc          >  2:9086305/1‑150 (MQ=255)
                                                                                                                                               aaGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCt         <  2:10115549/150‑1 (MQ=255)
                                                                                                                                               aaGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCt         >  1:9910788/1‑150 (MQ=255)
                                                                                                                                               aaGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCt         >  1:8423134/1‑150 (MQ=255)
                                                                                                                                               aaGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCGGATAGAATTGCGGTATTGACTATCAAATGCCCt         >  2:240606/1‑150 (MQ=255)
                                                                                                                                               aaGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGAGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCt         >  2:4566925/1‑150 (MQ=255)
                                                                                                                                                aGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTg        >  1:2810830/1‑150 (MQ=255)
                                                                                                                                                  aaaTCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGAt      >  1:7683379/1‑150 (MQ=255)
                                                                                                                                                     tCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCg   >  1:9407377/1‑150 (MQ=255)
                                                                                                                                                      cAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCgt  >  2:1022117/1‑150 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
CTCTTTTTGGAATATCTCAATTTTATGTGTCATTTTTCGGGGAAGGATATAGAGATTTAAGCAAGCATTTATTTGGAATGTATTTTTCGTTCGACCTTTGCTTATACATAACAGTCGT‑TTTTTTAATTTATAAAATAATTCAAAGAAATCAAGACAATAGCGATGTAAAGCACTAAGTTTAAATTGCGCGCCAATCATGGCGCGCACAAGCTATAATACCAACCTAATTTCTCCTCCTCTTAGAGTGACTATATCTCCTGATAGAATTGCGGTATTGACTATCAAATGCCCTGATTCGT  >  NC_000913/2470287‑2470585

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑