New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 1828872	59 (1.000)	4 (0.070)	4/258	NT	6.4%	coding (863/1479 nt)	astD	succinylglutamic semialdehyde dehydrogenase
	?	NC_000913	= 1828893	61 (1.100)					coding (842/1479 nt)	astD	succinylglutamic semialdehyde dehydrogenase

TTCCAGTTGCTGCCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1828721‑1828872 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcgcccGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAGCCAGCGATTAACGCCGGGCAACTGGGATGACGAACCGCAGCCGTTTATTGGCGGGCTGATTTCTGAACAGGCCGCACAGCAGGT  <  NC_000913/1828893‑1828746                                                                                                                                                                                                                                                                                                              TTCCAGTTGCTGCCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCATTAAACGGCTGCGGTTCGTCCTCCCCGTTGCCCCGCGTTAATCTCTGGCTGACGGCAACCAGACGCGCAAGAAACGCATCGCCCTGCG                                                                                                                                                         >  2:767789/1‑149                aGCAGTAACCACCTGCTGTGCGGCCGGCTCAGAAATCAGCCCGCCAATCAACGGCTGCGGTGCGTCATCCCAGTTGCCCGGCGATAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCGCCGTTTATTGC                                                                                                                                          <  1:1008713/148‑1                             TGCTCTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGC                                                                                                                             <  2:29300/149‑1                                  gGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGG                                                                                                                        <  2:818141/148‑1                                                         CGCCACTCAACGGCGGCGGTTCGGCAAGCCACTCGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCAGCGCCCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTG                                                                                                 <  2:687503/149‑1                                                                                                                                                CCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAGCCAGCGATTAACGCCGGGCAACTGGGATGACGAACCGCAGCCGTTTATTGGCGGGCTGATTTCTGAACAGGCCGCA          <  2:536560/149‑1                                                                                                                                                CCTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAGCCAGCGATTAACGCCGGGCAACTGGGATGACGAACCGCAGCCGTTTATTGGCGGGCTGATTTCTGAACAGGCCGCA          <  2:646203/149‑1                                                                                                                                                 CTGCGCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAGCCAGCGATTAACGCCGGGCAACTGGGATGACGAACCGCAGCCGTTTATTGGCGGGCTGATTTCTGAACAGGCCGCAC         >  2:227668/1‑149                                                                                                                                                     GCCCGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAGCCAGCGATTAACGCCGGGCAACTGGGATGACGAACCGCAGCCGTTTATTGGCGGGCTGATTTCTGAACAGGCCGCACAGCA     <  1:461994/149‑1                                                                                                                                                        CGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAGCCAGCGATTAACGCCGGGCAACTGGGATGACGAACCGCAGCCGTTTATTGGCGGGCTGATTTCTGAACAGGCCGCACAGCAGGT  >  1:281571/1‑149                                                                                                                                                                                                                                                                                                              TTCCAGTTGCTGCCATGCAGTAACCACCTGCTGTGCGGCCTGTTCAGAAATCAGCCCGCCAATAAACGGCTGCGGTTCGTCATCCCAGTTGCCCGGCGTTAATCGCTGGCTGACGGCAACCAGACGAGCAAGAAACGCATCGCCCTGCGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/1828721‑1828872 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cctgcgcccGCCGTTTATTGCTGAAAAGCGGGGCGCAGGGCGATGCGTTTCTTGCTCGTCTGGTTGCCGTCAGCCAGCGATTAACGCCGGGCAACTGGGATGACGAACCGCAGCCGTTTATTGGCGGGCTGATTTCTGAACAGGCCGCACAGCAGGT  <  NC_000913/1828893‑1828746

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.