New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	396419 =	58 (0.980)	4 (0.070)	4/268	NT	6.8%	intergenic (‑132/‑220)	ampH/sbmA	D‑alanyl‑D‑alanine‑ carboxypeptidase/endopeptidase; penicillin‑binding protein; weak beta‑lactamase/peptide antibiotic transporter
	?	NC_000913	396441 =	54 (0.940)					intergenic (‑154/‑198)	ampH/sbmA	D‑alanyl‑D‑alanine‑ carboxypeptidase/endopeptidase; penicillin‑binding protein; weak beta‑lactamase/peptide antibiotic transporter

AGCAGACTACGTTTCAACGGTGGTGTCCATAGATTGAATGAAGGTAACTGAGCGTATTTATACTACTCATTGATAGATTGCAAAGGGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGAAACAATTCTTATGGTCAGGCTGGCGAACTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTG  >  NC_000913/396271‑396564                                                                                                                                                     |                                                                                                                                                  aGCAGACTACGTTTGAACGGTGGTGTCCATAGATTGAATGAAGGTAACTGAGCGTTTTTATAGTACTCATTGATAGATTGCATAGGGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCt                                                                                                                                                   <  2:545124/149‑1 (MQ=255)   cAGACTACGTTTGAACGGTGGTGTCCATAGATTGTAGGAAGGTACCTGAGCGTATTTATACTACTCATTGATAGATTGCAAAGGGCGAATTAGTGCTATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCa                                                                                                                                                 <  2:218981/149‑1 (MQ=255)        taagTTTCTTCGGTTGTGGCCATAGATTGAATGAAGGTAAGTGAGCGTATTTATACTACTCATTGATAGATTGCAAAGGGCTTATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAAt                                                                                                                                            <  1:141766/146‑1 (MQ=255)          cGTTTCAACGGTGGTGTCCATAGATTGAATGAAGGTAACTGAGCGTATTTATACTACTCATTGATAGATTGCAAAGGGCGAATTAGGGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGc                                                                                                                                          >  2:619377/1‑149 (MQ=255)           gTTTCAACGGTGGTGTCCATAGATTGAATGAAGGTAACTGAGCGTATTTATACTACTCATTGATAGATTGCAAAGGGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGcc                                                                                                                                         >  2:39916/1‑149 (MQ=255)            tttCAACGGTGGTGTCCATAGATTGAATGAAGTTAACTTAGCGTATTTCTACTACTCATTGATAGATTTCAAAGGGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACAAATGcag                                                                                                                                        <  1:832865/149‑3 (MQ=255)             ttCAACGGTGGTGTCCATAGAATGAATGAAGGTAACTGAGCGTATTTATACTACTCATTGATAGCTTGCAAAGGGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTg                                                                                                                                       <  2:830678/149‑1 (MQ=255)                      agccaaatgaaaccgcccattgtgacccatagcaaggcacttagttcgccagcctgaccataagaattgtttcgacggatttcacaaaccaaagattgtttacataagcggattaacacgcgcaggaTCACCAATGCCTGCATTTGTGa                                                                                                                              >  1:123491‑M1/128‑149 (MQ=255)                       gtgtCCATAGATGGAATGAAGGTAACTGAGCGTATTTATAATACACATTGATAGATTGCAAAGGGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCAACAATGCATGCATTAGTGAt                                                                                                                             >  1:539833/1‑149 (MQ=255)                          tCCATAGATTGAATGAAGGTAACTGAGCGTATTTATACTACTCATTGATAGATTGCAAATGGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCt                                                                                                                          <  1:645466/149‑1 (MQ=255)                                  ttGAATGAAGGTAACTGAGCGTATTTATACTACTCATTGATAGATTGCAAAGGGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCgtgt                                                                                                                  >  2:827739/1‑149 (MQ=255)                                  ttGAATGAAGGTAACTGAGCGTATTTATACTACTCATTGATAGATTGCAAAGGGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCgtgt                                                                                                                  <  1:419735/149‑1 (MQ=255)                                     attgaaGGTAACTGAGCGTATTTATACTCCGCATTGATAGATTGCAAAGGGCGAATTAGTGCAATAATAGTGTTAAAAAAGTAACGGCTCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGAGTTaa                                                                                                               >  2:618762/3‑149 (MQ=255)                                        gaaGGTAACTGAGCGTATTTATACTACTCATTGATAGATTGCAAAGGGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATcc                                                                                                            <  1:219244/149‑1 (MQ=255)                                         aaGGTAACTGAGCGTATTTATACTACTCATTGATAGATTGCAAAGGGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCg                                                                                                           >  1:852329/1‑149 (MQ=255)                                          aGGTAACTGAGCGTATTTATACTACTCATTGATAGATTGCAAAGGGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGc                                                                                                          >  1:316948/1‑149 (MQ=255)                                          aGGTAACTGAGCGTATTTATACTACTCATTGATAGATTGCAAAGGGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGc                                                                                                          >  2:474245/1‑149 (MQ=255)                                           ggTAACTGAGCGTATTTATACTACTCATTGATAGATTGCAAAGGGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCt                                                                                                         <  2:419082/149‑1 (MQ=255)                                            gTAACTGAGCGTATTTATACTACTCATTGATAGATTGCAAAGTGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCtt                                                                                                        <  2:71044/149‑1 (MQ=255)                                            gTAACTGAGAGTATTTATACTACTCATTGATAGATTGCAAAGGGCGAATTAGTGCAATAATAGTGTTAAAATCGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCtt                                                                                                        <  1:194559/149‑1 (MQ=255)                                                  gAGCGTATTTATACTACTCATTGATAGATTGCAAAGGGCGAATTAGAGCAATAATAGTGTTAAAAACTTAACGGCGCGTAAACACGATCTTTTTCCTGCTAACAAATGCATGCATTTGTGATCCTGAGCGTGTTAATCCGCTTATGTaa                                                                                                  >  1:679103/1‑149 (MQ=255)                                                    agcaaggcgcttagttcgccagcctgaccataagaattgtttcgacggatttcacaaaccaaagattgtttacataagcggattaacacgcgcaggaTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAAc                                                                                                <  1:200036‑M1/52‑1 (MQ=255)                                                     cGTATTTATACTACTCATTGATAGATTGCAAAGGGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCTCTTAACCACGATCTTTTTCCTGCTCACCAATGCCTGCAGTTGTGATCCTGCGCGTGTTACTCCGCTTATGTAAACa                                                                                               >  1:568380/1‑149 (MQ=255)                                                       tATTTATACTACTCATTGATAGATTGCAAAGGGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAAAACGATCTATTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACaaa                                                                                             >  2:474105/1‑148 (MQ=255)                                                        aTTTATACTACTCATTGATAGATTGCAAAGGGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTTAACACGATCTTTTTCCTGCTGAACAATGCATGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATc                                                                                            >  1:566948/1‑149 (MQ=255)                                                         tttATACTACTCATTGATAGATTGCAAAGGGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCt                                                                                           >  1:303306/1‑149 (MQ=255)                                                          ttATACTACTCATTGATAGATTGCAAAGGGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCtt                                                                                          <  2:495625/149‑1 (MQ=255)                                                               ctactCATTGATAGATTGCAAAGGGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGtt                                                                                     >  1:806623/1‑149 (MQ=255)                                                                   tcgccagcctgaccataagaattgtttcgacggatttcacaaaccaaagattgtttacataagcggattaacacgcgcaggaTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTtgtg                                                                                 >  2:200036‑M1/83‑149 (MQ=255)                                                                   tCATTGATAGATTGCAAAGGGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTAGTGATCCTGCGCGTGTTAATCAGCTTATGTAAACAATCTTTGGTTtgtg                                                                                 >  1:731195/1‑149 (MQ=255)                                                                     aTTGATAGATTGCAAAGGGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGaa                                                                               >  1:591565/1‑149 (MQ=255)                                                                      ttGATAGATTGCAAAGGGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGaaa                                                                              <  1:184741/149‑1 (MQ=255)                                                                               tGCAAAGGGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGaa                                                                     >  1:820157/1‑149 (MQ=255)                                                                                 cAAAGGGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGAAAc                                                                   >  2:342672/1‑149 (MQ=255)                                                                                     gggCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGAAACAAtt                                                               <  2:591565/149‑1 (MQ=255)                                                                                        cGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGAAACAATTCtt                                                            >  1:936595/1‑149 (MQ=255)                                                                                          aaTTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGAAACAATTCTTAt                                                          <  1:494027/149‑1 (MQ=255)                                                                                          aaTAAGTGCCATAATAGTGTTACAAACGTCACGGCGCGTACACACGATCTTTTTCCAGCTCACCACTGCCTGCATTTGTGATCCTGCGCGTGTGACTCCGCGTATGGACACAATCTTTGGGTTGTGAACTCCGGCGAAACAATGCTTAt                                                          <  2:676601/149‑1 (MQ=255)                                                                                               gTGCAATAATAGTGTTAAAAACGTAACAGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCAGCAGTTGTGATCCTCAGCGTGTTAATCCGCTTATGTAACCAATCTTTGGTTTGTGAAATCCGTCGAAACTATTCTTATGGtaa                                                     >  1:602378/1‑147 (MQ=255)                                                                                                tGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGAAACAATTCTTATGGTCAg                                                    <  1:677754/149‑1 (MQ=255)                                                                                                 gCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGACTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACATTCTTGGGTTTGTGAAATCCGTCGAAACCATTCTTATGGTCAgg                                                   >  1:577323/1‑149 (MQ=255)                                                                                                  cAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGATTGTGAAATCCGTCGAAACAATTGTTATGGTCAGGc                                                  >  1:884291/1‑149 (MQ=255)                                                                                                   aataatAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGCTTGTGAAATCCGTCGAAACAATTCTTATGGTCAGGCt                                                 <  1:909415/149‑1 (MQ=255)                                                                                                     taataGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGAAACAATTCTTATGGTCAGGCTgg                                               <  1:638441/149‑1 (MQ=255)                                                                                                      aataGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGAAACAATTCTTATGGTCAGGCTGGc                                              <  1:243930/149‑1 (MQ=255)                                                                                                      aataGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGAAACAATTCTTATGGTCAGGCTGGc                                              >  1:872652/1‑149 (MQ=255)                                                                                                       ataGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGAAACAATTCTTATGGTCAGGCTGGCg                                             <  2:316948/149‑1 (MQ=255)                                                                                                         aGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATTCCTGCATTTGTGATCCTGCTCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGAAACAATTCTTATGGTCAGGCTGGCGaa                                           <  2:553330/149‑1 (MQ=255)                                                                                                             ttAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGAAACAATTCTTATGGTCAGGCTGGCGAACTaa                                       >  1:301690/1‑149 (MQ=255)                                                                                                              tAAAAACGTATAGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGAAACAATTCTTATGGTCAGGCTGGCGAACTAAg                                      <  1:109702/149‑1 (MQ=255)                                                                                                               aaaaaCGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGAAACAATTCTTATGGTCAGGCTGGCGAACTAAgc                                     >  2:287532/1‑149 (MQ=255)                                                                                                                aaaaCGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGAGTGTTAATCCGATTATGTAAACAATATTAGGTTTGTGAAATCCGTCGAAACAATTATTATGGTCAGGCTGGCTAACTAAgag                                    >  2:774764/1‑147 (MQ=255)                                                                                                                 aaaCGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGAAACAATTCTTATGGTCAGGCTGTCGAACTAAgcgc                                   >  1:523470/1‑149 (MQ=255)                                                                                                                   aCGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGAAACAATTCTTATGGTCAGGCTGGCGAACTAAGCGCCt                                 >  2:547502/1‑149 (MQ=255)                                                                                                                     gTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTTAAATCCGTCGAAACAATTCTTATGGTCAGGCTGGCGAACTAAGCGCCTTg                               >  1:581692/1‑149 (MQ=255)                                                                                                                         cGGCGCGGAAACACTATCTTTTTCCTTCTCACCAATGCCGGCATCTGTGATCCTGCGCGTGTTAATCCGCTTCTGTATACAATCTTTGGTGTGTGAAATCCGTCGAAACAATTCTTATGGTCAGGCTGGCGAACTAAGCGCCTTGCTAt                           <  1:616213/149‑1 (MQ=255)                                                                                                                           gcgcGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGAAACAATTCTTATGGTCAGGCTGGCGAACTAAGCGCCTTGCTATgg                         <  2:820157/149‑1 (MQ=255)                                                                                                                           gcgcGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGGGATCCTGCGCGTGTTACTCCGCGTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGAAACAATTCTTATGGTCAGGCTGGCGAACTAAGCGCCTTGCTATgg                         <  1:303881/149‑1 (MQ=255)                                                                                                                                   ggattaacacgcgcaggaTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGAAACAATTCTTATGGTCAGGCTGGCGAACTAAGCGCCTTGCTATGGGTCACAAt                 <  2:236456‑M1/131‑1 (MQ=255)                                                                                                                                     acGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGAAACAATTCTTATGGTCAGGCTGGCGAACTAAGCGCCTTGCTATGGGTCACAATgg               >  1:891114/1‑149 (MQ=255)                                                                                                                                         tCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGAAACAATTCTTATGGTCAGGCTGGCGAACTAAGCGCCTTGCTATGGGTCACAATGGGCgg           <  2:303306/149‑1 (MQ=255)                                                                                                                                           tttatCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGAAACAATTCTTATGGTCAGGCTGGCGAACTAAGCGCCTTGCTATGGGTCACAATGGGCGGtt         <  2:260596/149‑1 (MQ=255)                                                                                                                                               tCCTGCTCCCCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGAAACAATGCTTATGGTCAGGCTGGCGAACTACGCGCCTTGCTATGGGTCACATTGGGCGGTTTCAt     >  1:923526/1‑149 (MQ=255)                                                                                                                                               tCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGAAACAATTCTTATGGTCAGGCTGGCGAACTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCAt     >  1:927275/1‑149 (MQ=255)                                                                                                                                                  tGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGAAACAATTCTTATGGTCAGGCTGGCGAACTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTg  >  1:901800/1‑149 (MQ=255)                                                                                                                                                     |                                                                                                                                                  AGCAGACTACGTTTCAACGGTGGTGTCCATAGATTGAATGAAGGTAACTGAGCGTATTTATACTACTCATTGATAGATTGCAAAGGGCGAATTAGTGCAATAATAGTGTTAAAAACGTAACGGCGCGTAAACACGATCTTTTTCCTGCTCACCAATGCCTGCATTTGTGATCCTGCGCGTGTTAATCCGCTTATGTAAACAATCTTTGGTTTGTGAAATCCGTCGAAACAATTCTTATGGTCAGGCTGGCGAACTAAGCGCCTTGCTATGGGTCACAATGGGCGGTTTCATTTG  >  NC_000913/396271‑396564

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.