| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 3885280 | 203 (2.180) | 11 (0.120) | 8/286 | 8.9 | 5.4% | coding (205/1647 nt) | yidC | membrane protein insertase |
| ? | NC_000913 | = 3885315 | 190 (2.110) | coding (240/1647 nt) | yidC | membrane protein insertase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
GATCTGGCAAGCCTGGGAGCAGGATAAAAACCCGCAACCTCAGGCCCAACAGACCACGCAGACAACGACCACCGCAGCGGGTAGCGCCGCCGACCAGGGCGTACCGGCCAGTGGCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3885129‑3885280‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttg‑‑CTCAACATCACCACCACGGGTGTTGATGGTCAGATCAAGCACGTCGGTCTTAACCGAGATCAGTTTCCCCTGGCCACTGGCCGGTACGCCCTGGTCGGCGGCGCTACCCGCTGCGGTGGTCGTTGTCTGCGTGGTCTGTTGGGCCTGA < NC_000913/3885315‑3885168 GATCTGGCAAGCCTGGGAGCAGGATAAAAACCCGCAACCTCAGGCCCAACAGACCACGCAGACACCGACCCCCGCAGCGGGAAGCGCCGCCGACCAGGGCGTACCGGCCAGTGGCCAGGGGAAACTGATCTCGGTTAAGACAGACGTGC > 2:1501776/1‑149GATCTGGCAAGCCTGGGAGCAGGATAAAAACCCGCAACCTCAGGCCCAACAGACCACGCAGACAACGACCACCGCAGCGGGTAGCGCCGCCGACCAGGGCGTACCGGCCAGTGGCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGC > 2:151624/1‑149GATCTGGCAAGCCTGGGAGCAGGATAAAAACCCGCAACCTCAGGCCCAACAGACCACGCAGACAACGACCACCGCAGCGAGTAGCGCCGCCGCCCAGGGCGTACCGGCCAGTGGCCAGGGGACCCTGATCTCGGGTAAGACCGACGTGC > 1:809260/1‑149 ATCTGGCAAGCCTGGGAGCAGGATAAAAACCCGCAACCTCAGGCCCAACAGACCACGCAGACAACGACCACCGCAGCGGGTAGCGCCGCCGACCAGGGCGTACCGGCCAGTGGCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCT < 1:677676/149‑1 TCTGGCAAGCCTGGGAGCAGGATAAAACCCCGCAACCTCAGGCCCAACAGACCACGCAGACCCCGACCACCGCAGCGGGTAGCGCCGCCGACCAGGGCGTACCGGCCAGTGGCCAGGGGAAACTGATCTCGGTTAAGCCCGACGTGCTT > 1:1133959/1‑149 TCTGGCAAGCCTGGGAGCAGGATAAAAACCCGCACCCTCAGGCCCAACAGACCACGCAGACACCGACCACCGCAGCGGGTAGCGCCGCCGACCAGGGCGTACCGGCCGGTGGCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTT > 1:1105672/1‑149 TCTGGCAAGCCTGGGAGCAGGATAAAAACCCGCAACCTCAGGCCCAACAGACCACGCAGACAACGACCACCGCAGCGGGTAGCGCCGCCGACCAGGGCGTACCGGCCAGTGGCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTT > 1:21050/1‑149 CCGCAACCTCAGGCCCAACAGACCACGCAGACAACGACCACCGCAGCGGGTAGCGCCGCCGACCAGGGCGTACCGGCCAGTGGCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTG‑‑CTCAACATCACCACCACGGGTGTTGATG > 1:1334398/1‑149 GCAACCTCAGGCCCAACAGACCACGCAGACAACGACCACCGCAGCGGGTAGCGCCGCCGACCAGGGCGTACCGGCCAGTGGCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTGATCTGACCATCACCACCACGGGTGTTGATG < 1:1067675/149‑1 AACCTCAGGCCCAACAGACGACGCAGACAACGACCACCGGAGCGGGTAGAGCCGCCGACCAGGGCGTACCGGCCAGTGGCCAGGGGAAACTGATCTGGGTTAAGACCGACGTGCTTGATCTGACCATCACCACCACGGGTGTTGATGGT < 1:986374/149‑1 CCTCAGGCCCAACAGACCACGCAGACAACGACCACCGCAGCGGGTAGCGCCGCCGACCAGGGCGTACCGGCCAGTGGCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTGATCTGACCATCACCACCACGGGTGTTGATGGTCA < 1:1270252/149‑1 GCCCAACAGACCACGCAGACAACGACCACCGCAGCGGGTAGCGCCGCCGACCAGGGCGTACCGGCCAGTGGCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTG‑‑CTCAACATCACCACCACGGGTGTTGATGGTCAGATCAAGC < 1:159339/149‑1 CCCAACAGACCACGCAGACAACGACCACCGCAGCGGGTAGCGCCGCCGACCAGGGCGTACCGGCCAGTGGCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTG‑‑CTCAACATCACCACCACGGGTGTTGATGGTCAGATCAAGCA < 2:1115829/149‑1 CCCAACAGACCACGCAGACAACGACCACCGCAGCGGGTAGCGCCGCCGACCAGGGCGTACCGGCCAGTGGCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTG‑‑CTCAACATCACCACCACGGGTGTTGATGGTCAGATCAAGCA < 2:1334398/149‑1 CCCAACAGACCACGCAGACAACGACCACCGCAGCGGGTAGCGCCGCCGACCAGGGCGTACCGGCCAGTGGCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTG‑‑CTCAACATCACCACCACGGGTGTTGATGGTCAGATCAAGCA < 2:225623/149‑1 CCCAACAGACCACGCAGACAACGACCACCGCAGCGGGTAGCGCCGCCGACCAGGGCGTACCGGCCAGTGGCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTG‑‑CTCAACATCACCACCACGGGTGTTGATGGTCAGATCAAGCA < 2:411659/149‑1 CCAACAGACCACGCAGACAACGACCACCGCAGCGGGTAGCGCCGCCGACCAGGGCGTACCGGCCAGTGGCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTG‑‑CTCAACATCACCACCACGGGTGTTGATGGTCAGATCAAGCAC < 1:42761/149‑1 AACAGACCACGCAGACAACGACCACCGCAGCGGGTAGCGCCGCCGACCAGGGCGTACCGGCCAGTGGCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTG‑‑CTCAACATCACCACCACGGGTGTTGATGGTCAGATCAAGCACGT < 2:410754/149‑1 TTG‑‑CTCAACATCACCACCACGGGTGTTGATGGTCAGATCAAGCACGTCGGTCTCAACCGAGATCAGTTTCCCCTGGCCACTGGCCGGTACGCCCTGGTCGGCGGCGCTACCCGCTGCGGTGGTCGTTGTCTGCGTGGTCTGTTGGGCCT > 2:937757/1‑149 TG‑‑CTAAACCTCACCACCACTGGGGTTGATGGTCAGATCACGCACGTCGGTCTTAACGGAGATCAGGTTCCCCTGTCCACTGGCCGGTACGCCCTGGTCGGCGGCGCTAACCGCTGCGGTGGTCGTTGTCTGCGTGGTCTGTTGGGCCTG < 2:945915/149‑1 G‑‑CTCAACATCACCACCACGGGTGTTGATGGTCAGATCAAGCACGTCGGTCTTTACCGAGATCAGTTTCCCCTGGCCAGTGGCCGGTACGCCCTGGTCGGCTGCGCTACCCGCTGCGGTGGTCGTTGTCTGAGAGGTCTGGTGGGCCTGA > 1:100827/1‑149 G‑‑CTCAACATCACCACCACGGGTGTTGATGGTCAGATCAAGCACGTCGGTCTTAACCGAGATCAGTTTCCCCTGGCCACTGGCCGGTACGCCCTGGTCGGCGGCGCTACCCGCTGCGGTGGTCGTTGTCTGCGTGGTCTGTTGGGCCTGA > 2:1232636/1‑149 G‑‑CTCAACATCACCACCACGGGTGTTGATGGTCACATCAAGCACGTCGGTCTTAACCGAGATCAGTTTCCCCTGGCCACTGGCCGGTACGCCCTGGTCGGCGGCGCTACCCGCTGCGGTGGTCGTTGTCTGCGTGGTCTGTTGGGCCTGA > 2:411872/1‑149 GATCTGGCAAGCCTGGGAGCAGGATAAAAACCCGCAACCTCAGGCCCAACAGACCACGCAGACAACGACCACCGCAGCGGGTAGCGCCGCCGACCAGGGCGTACCGGCCAGTGGCCAGGGGAAACTGATCTCGGTTAAGACCGACGTGCTTG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/3885129‑3885280‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gcttg‑‑CTCAACATCACCACCACGGGTGTTGATGGTCAGATCAAGCACGTCGGTCTTAACCGAGATCAGTTTCCCCTGGCCACTGGCCGGTACGCCCTGGTCGGCGGCGCTACCCGCTGCGGTGGTCGTTGTCTGCGTGGTCTGTTGGGCCTGA < NC_000913/3885315‑3885168 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |