BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	3774236 =	NA (NA)	10 (0.020)	6/262	NT	NA	noncoding (1/99 nt)	RIP271 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP271 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
*	?	NC_000913	3774261 =	NA (NA)	10 (0.020)	6/262	NT	NA	noncoding (26/99 nt)	RIP271 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP271 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 945 total aligned reads displayed.

GTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTGGGTGAGGGAAAAGCCTCACCCC  >  NC_000913/3774087‑3774385

tcaatgtttttacccgagagggctggggtgaggcttttccctcacccaaaccctctccgtgaggagaggggcagcgccggatgcggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtagg                                                                                                                                                       <  1:6846944‑M1/1‑1 (MQ=255)

tcaatgtttttacccgagagggctggggtgaggcttttccctcacccaaaccctctccgtgaggagaggggcagcgccggatgcggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtagg                                                                                                                                                       <  2:8085423‑M1/1‑1 (MQ=255)

 ttATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGc                                                                                                                                                      >  2:4208793/1‑150 (MQ=255)

 ttATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGAGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGc                                                                                                                                                      >  2:1623845/1‑150 (MQ=255)

   atgtttttacccgagagggctggggtgaggcttttccctcacccaaaccctctccgtgaggagaggggcagcgccggatgcggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtagGCCt                                                                                                                                                    >  1:7893689‑M1/147‑150 (MQ=255)

   atgtttttacccgagagggctggggtgaggcttttccctcacccaaaccctctccgtgaggagaggggcagcgccggatgcggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtagGCCt                                                                                                                                                    >  2:6894511‑M1/147‑150 (MQ=255)

   atgtttttacccgagagggctggggtgaggcttttccctcacccaaaccctctccgtgaggagaggggcagcgccggatgcggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtagGCCt                                                                                                                                                    >  2:5684959‑M1/147‑150 (MQ=255)

   atgtttttacccgagagggctggggtgaggcttttccctcacccaaaccctctccgtgaggagaggggcagcgccggatgcggcgtaagcgccttatcccgcctacaagaacgtgcaaattcaccacattgtgatgcatcctgtagGCCt                                                                                                                                                    <  2:1715555‑M1/4‑1 (MQ=255)

   aggttttgacccgagagggctggggtgaggcttttccctcacccaatccctctccgtgaggagaggggcagcgccggatgcggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtagGCCt                                                                                                                                                    >  2:1997149‑M1/147‑150 (MQ=255)

   aTCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCt                                                                                                                                                    <  2:3641998/150‑1 (MQ=255)

      tttttacccgagagggctggggtgaggcttttccctcacccaaaccctctccgtgaggagaggggcagcgccggatgcggcgtacgcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtagGCCTGAt                                                                                                                                                 <  1:931304‑M1/7‑1 (MQ=255)

      tttttacccgagagggctggggtgaggcttttccctcacccaaaccctctccgtgaggagaggggcagcgccggatgcggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtagGCCTGAt                                                                                                                                                 >  1:603475‑M1/144‑150 (MQ=255)

      tttttacccgagagggctggggtgaggcttttccctcacccaaaccctctccgtgaggagaggggcagcgccggatgcggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtagGCCTGAt                                                                                                                                                 >  1:2769471‑M1/144‑150 (MQ=255)

      aCCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGAt                                                                                                                                                 >  2:4322534/1‑150 (MQ=255)

       ccAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATg                                                                                                                                                >  1:4868122/1‑150 (MQ=255)

        cAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATgc                                                                                                                                               >  1:5326618/1‑150 (MQ=255)

          gCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATgcgc                                                                                                                                             <  2:8404500/150‑1 (MQ=255)

                 cAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCtt                                                                                                                                      <  2:2689048/150‑1 (MQ=255)

                 cAATGCACTGGATGATGAGTCCGTCATCGAGCGGCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGGAAGTAATCCAATCCCACCCTCTCCACCGGGAGACGGGGGGGTGAAGTGCCGGATGCGCTCCGcgt                                                                                                                                      >  2:1096285/1‑148 (MQ=255)

                   aTGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTAt                                                                                                                                    >  2:7529797/1‑150 (MQ=255)

                     gCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCa                                                                                                                                  <  2:8586369/150‑1 (MQ=255)

                     gCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCa                                                                                                                                  <  2:119574/150‑1 (MQ=255)

                       aCTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAgg                                                                                                                                >  1:7531756/1‑150 (MQ=255)

                        ggggtgaggcttttccctcacccaaaccctctccgtgaggagaggggcagcgccggatgcggcgtaagcgccttatccggcctacaagaacgtgcaaattcaacaaattgtgatgcatcctgtagGCCTGATGCGCTACGCTTATCAGGc                                                                                                                               >  1:1901634‑M1/126‑150 (MQ=255)

                        cTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGc                                                                                                                               <  1:4656104/150‑1 (MQ=255)

                                tgaGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGa                                                                                                                       <  2:2333846/150‑1 (MQ=255)

                                 gaGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGAt                                                                                                                      >  1:147164/1‑150 (MQ=255)

                                 gaGTCCGTCACCGAGCGTCTGGCACCCACCCCCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGAt                                                                                                                      <  2:6216113/150‑1 (MQ=255)

                                   gTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGc                                                                                                                    >  1:5043267/1‑150 (MQ=255)

                                    tCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCa                                                                                                                   >  1:8548433/1‑150 (MQ=255)

                                    tCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCa                                                                                                                   <  1:2306942/150‑1 (MQ=255)

                                         cATCGAGCGTCTGGCACACACCACCCGCGTGGATGACGTGCGGGAACTGCTGGCAGGTCGTACGTAATCCAATCCCACCCTCTCCACATGGAGAAGGGGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATcaca                                                                                                              <  2:8699517/150‑1 (MQ=39)

                                            cGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAAtt                                                                                                           <  2:2822534/150‑1 (MQ=255)

                                             gAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAAttt                                                                                                          >  1:8307705/1‑150 (MQ=255)

                                             gAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAAttt                                                                                                          >  1:1010994/1‑150 (MQ=255)

                                               gCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATttgt                                                                                                        <  1:7723632/150‑1 (MQ=255)

                                                cGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATttgtt                                                                                                       <  2:3258423/150‑1 (MQ=255)

                                                    tGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAAt                                                                                                   >  2:2935976/1‑150 (MQ=255)

                                                    tGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAAt                                                                                                   >  1:6503060/1‑150 (MQ=255)

                                                    tGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAAt                                                                                                   >  1:6113431/1‑150 (MQ=255)

                                                     ggCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAAtt                                                                                                  <  1:7279188/150‑1 (MQ=255)

                                                     ggCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAAtt                                                                                                  <  2:6970834/150‑1 (MQ=255)

                                                       cacacaCCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTg                                                                                                <  1:1650786/150‑1 (MQ=255)

                                                       cacacaCCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTg                                                                                                >  1:2095899/1‑150 (MQ=255)

                                                              caccaGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTc                                                                                         >  2:4484083/1‑150 (MQ=255)

                                                                 caGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTg                                                                                      <  1:6683889/150‑1 (MQ=255)

                                                                        gATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCg                                                                               <  1:6921862/150‑1 (MQ=255)

                                                                        gATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCg                                                                               >  1:4556147/1‑150 (MQ=255)

                                                                        gATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCg                                                                               <  2:48516/150‑1 (MQ=255)

                                                                          tGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGa                                                                             <  2:7639342/150‑1 (MQ=255)

                                                                          tGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGa                                                                             <  2:140323/150‑1 (MQ=255)

                                                                          tGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGa                                                                             <  1:3219898/150‑1 (MQ=255)

                                                                          tGAAGTGCAGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCAGCACAATTTGTTGAATTTGCACGTTCTTGTCGGCCGGa                                                                             >  2:5379007/1‑150 (MQ=255)

                                                                             aGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCTCATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATaa                                                                          <  1:5474692/150‑1 (MQ=255)

                                                                                 cTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGgcg                                                                      <  1:4806112/150‑1 (MQ=255)

                                                                                  tGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGACGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATGTGGTGAAGGTGCACGTTCTGGGAGGCCGGATAAGgcgc                                                                     >  1:5885245/1‑150 (MQ=38)

                                                                                  tGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGgcgc                                                                     <  1:4366394/150‑1 (MQ=255)

                                                                                       ctgctgGCAGGTCGTAAGTAATACAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTAcg                                                                <  2:5169512/150‑1 (MQ=255)

                                                                                         gctgGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGTGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTAcgca                                                              <  2:6476464/150‑2 (MQ=255)

                                                                                           tgGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTAcgccgc                                                            >  1:6265182/1‑150 (MQ=255)

                                                                                             gCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAGGGCGCTTAcgccgcct                                                          >  2:5577098/1‑148 (MQ=255)

                                                                                             gCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCAt                                                          >  1:7153829/1‑150 (MQ=255)

                                                                                                 gTCGTAAGTAATCCACTCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCgg                                                      <  2:6096988/150‑1 (MQ=255)

                                                                                                     taagtaaTCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCt                                                  >  1:4269448/1‑150 (MQ=255)

                                                                                                       agtaaTCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGTATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGc                                                >  2:3921224/1‑150 (MQ=255)

                                                                                                       agtaaTCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGc                                                <  2:4005430/150‑1 (MQ=255)

                                                                                                       agtaaTCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGc                                                <  2:7933658/150‑1 (MQ=255)

                                                                                                        gtaaTCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAAGTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGcc                                               >  2:1813636/1‑150 (MQ=255)

                                                                                                         taaTCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGccc                                              >  2:3523443/1‑150 (MQ=255)

                                                                                                           aattaatccCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCct                                            >  1:265470/5‑150 (MQ=255)

                                                                                                           aattaatccCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAAGTTGTTGAATTTGCACGTTCTTGTAGGCCGGAGAAGGCGCTTACGCCGCATCCGGCGCTGccccg                                            >  1:5632389/5‑149 (MQ=255)

                                                                                                              taaccccACCTTCTCCATGTGGAGAGGGTGGGATTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCtctc                                         >  1:2399511/5‑150 (MQ=25)

                                                                                                              caatccCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCtctc                                         <  2:316079/150‑1 (MQ=255)

                                                                                                               aaacccACCCTCTCCACATGGTTTTGGTGGGTTTATTTGCCTGATGCGCTACGTTTATCTGGCCTACTGTATGCAAAAAATTTTTTTTATTTTGCTGGTTTTTGTTGGCCGTATATGGCGATTACGCCGATTCCGGCGCTGCCCCTctcc                                        <  1:8172245/147‑1 (MQ=255)

                                                                                                                  cccACCTTCTCCATGTGGAGAGGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGTCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCa                                     >  1:3323536/1‑150 (MQ=37)

                                                                                                                   ccACCTTCTCCATGTGGAGAGGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATGTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCAc                                    >  2:7752403/1‑150 (MQ=37)

                                                                                                                   ccACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCAc                                    >  2:7121483/1‑150 (MQ=255)

                                                                                                                   ccACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCAc                                    >  2:8218712/1‑150 (MQ=255)

                                                                                                                    cACCCTCTCCACATGGAGACGGTGGGGTTAAGTGCCTGATGCGCTACGCTTATCAGGCCTCCAGGATGCATCACAAGTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACg                                   >  2:5075472/1‑150 (MQ=255)

                                                                                                                       cttctcCATGTGGAGAGGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGgag                                >  2:5970239/3‑150 (MQ=255)

                                                                                                                       cttctcCATGTGGAGAGGGTGGGATTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGgag                                >  1:8067721/3‑150 (MQ=255)

                                                                                                                        ttctcCATGTGGAGAGGGTGGGATTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGgaga                               >  1:5192010/2‑150 (MQ=255)

                                                                                                                         tctcCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGagag                              >  2:6597963/1‑150 (MQ=255)

                                                                                                                          ccccACATGGTGATGGTGGGTTTATTTGCCTGATGCGCTACGCTTATCAGGCCTACAGTATGCATCACATTTTTTTTAATTTGCACGTTCTTTTTGGCCGTATAAGGCGATTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAgg                             <  1:1781903/148‑1 (MQ=25)

                                                                                                                             cccctGGAGAAGGTGGGGTTAATTGCCTGCTGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTCCGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGtt                          <  2:6741370/146‑1 (MQ=255)

                                                                                                                             cactTGGAGATGGTGGGGTTTATTGCCTGTTGCGCTACGCTTTTCAGGCCTACTGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGtt                          <  1:8433467/150‑1 (MQ=37)

                                                                                                                             cacaTGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGtt                          >  1:1216185/1‑150 (MQ=255)

                                                                                                                             cacaTGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGtt                          >  2:2516973/1‑150 (MQ=255)

                                                                                                                              acaTGGAGTTGGTGGGTTTTTTTGGCTGATGCGCTACGATTATCTGGCCTACTGGATGCATCACAATTTGTTGTATTTGCACGTTCTTGTAGGCCGTATTAGGCGCTTACGCCGCATCGGGCGCTGACCCTCTCCTCACGGAGAGGGtca                         <  1:3072530/150‑3 (MQ=255)

                                                                                                                              acaTGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGttt                         <  1:396140/150‑1 (MQ=255)

                                                                                                                                aTGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTgg                       <  2:4718889/150‑1 (MQ=255)

                                                                                                                                    agaAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTGGGTGa                   <  2:3023495/150‑1 (MQ=255)

                                                                                                                                      atggTGGGTTTAATTGCCTGATGCGCTACGATTATCAGGCCTCCAGTATGCATCTCAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATTTGGCGCTTACGCCGCTTGCGGCGCTGCCCCTCTCCTCACGGTGAGGGTTTGGGTGAgg                 <  1:3597219/148‑1 (MQ=37)

                                                                                                                                      aaGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTGGGTGAgg                 >  1:4081322/1‑150 (MQ=255)

                                                                                                                                      aaGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTGGGTGAgg                 <  1:7655259/150‑1 (MQ=255)

                                                                                                                                      aaGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTGGGTGAgg                 <  2:4630775/150‑1 (MQ=255)

                                                                                                                                             ggTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTGGGTGAGGGAAAAGc          <  2:2163409/150‑1 (MQ=255)

                                                                                                                                             ggTTAATTGCCTGATGCGATACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTGGGTGAGGGAAAAGc          <  1:3846162/150‑1 (MQ=255)

                                                                                                                                                   ttGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTGGGTGAGGGAAAAGCCTCAcc    >  2:7256130/1‑150 (MQ=255)

                                                                                                                                                   ttGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGGTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTGGGTGAGGGAAATGCCTCAcc    >  1:3509216/1‑150 (MQ=255)

GTTATCACCAGCCTGACCAATGCACTGGATGATGAGTCCGTCATCGAGCGTCTGGCACACACCACCAGCGTGGATGAAGTGCTGGAACTGCTGGCAGGTCGTAAGTAATCCAATCCCACCCTCTCCACATGGAGAAGGTGGGGTTAATTGCCTGATGCGCTACGCTTATCAGGCCTACAGGATGCATCACAATTTGTTGAATTTGCACGTTCTTGTAGGCCGGATAAGGCGCTTACGCCGCATCCGGCGCTGCCCCTCTCCTCACGGAGAGGGTTTGGGTGAGGGAAAAGCCTCACCCC  >  NC_000913/3774087‑3774385

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.