BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 3877665	NA (NA)	7 (0.010)	5/262	NT	NA	noncoding (80/98 nt)	RIP280 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP280 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site
*	?	NC_000913	= 3877676	NA (NA)	7 (0.010)	5/262	NT	NA	noncoding (91/98 nt)	RIP280 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site	RIP280 (repetitive extragenic palindromic) element; contains 2 REP sequences and 1 IHF site

Only 100 of 1029 total aligned reads displayed.

GGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCGGCAGCAATCGCAT  >  NC_000913/3877516‑3877814

 ggATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATa                                                                                                                                                      >  1:2349770/1‑150 (MQ=255)

    tgatAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGc                                                                                                                                                   <  1:3277924/150‑1 (MQ=255)

     gatAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCg                                                                                                                                                  >  2:13524/1‑150 (MQ=255)

       tAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTa                                                                                                                                                <  2:7807112/150‑1 (MQ=255)

         aTTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAgc                                                                                                                                              <  1:1367899/150‑1 (MQ=255)

           tGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAgcgc                                                                                                                                            <  1:6873960/150‑1 (MQ=255)

            gCGGATTGCAGAAATAAACAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCa                                                                                                                                           >  1:3858738‑M2/1‑149 (MQ=255)

            gCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCa                                                                                                                                           >  2:6292462‑M2/1‑149 (MQ=255)

             cGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGAAAGATTTTCGTAGGCCTGATAAGCGTAGCGCat                                                                                                                                          <  1:8051747‑M2/150‑3 (MQ=255)

             cGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTGTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCat                                                                                                                                          <  2:375566‑M2/150‑3 (MQ=255)

                  tGCAGAAATAAAACGGGCGGAGAAGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTGATCCGGCCTACAACCTCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATgcgctacgcttatcaggc                                                                                                                                     <  2:8278089‑M1/150‑19 (MQ=255)

                  tGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATgcgctacgcttatcaggc                                                                                                                                     <  2:1467732‑M1/150‑19 (MQ=255)

                   gCAGAAATAAAAAGGGCGGAGATGATCTCCGCACTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTCTCCGGCCTACAACATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCa                                                                                                                                    <  2:3081115/150‑1 (MQ=255)

                    cAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTCGCGCATCAGGCAc                                                                                                                                   >  1:4511889/1‑150 (MQ=255)

                    cAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAc                                                                                                                                   >  2:2454895/1‑150 (MQ=255)

                    cAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTGCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCAc                                                                                                                                   >  1:7077941/1‑150 (MQ=255)

                       aaaTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCt                                                                                                                                <  2:6136229/150‑1 (MQ=255)

                        aaTAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTc                                                                                                                               <  2:8045478/150‑1 (MQ=255)

                              aaGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATTCGGCGTGAACGCCTTATCCGGCCAACAAAATCATGAAAATTAAATACATTTCAAGATTTTAGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATgg                                                                                                                         >  1:3116891/1‑150 (MQ=25)

                               aGGGCGGAGATCATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGGGAACGCCTTATCCGGCCTACAAAATCATGAACATTCAATACATTGCAAGATTTTCGTAGGCCGGATAAGCGGAGCGCAGCAGGCCCGCTCGCAgggg                                                                                                                        >  1:509251/1‑149 (MQ=21)

                                gggCGGAGATCATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGtt                                                                                                                       >  2:6832925/1‑150 (MQ=255)

                                  gCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAAAGCCTTATCCCGCCTACAAAATCATGAAAAATCAATACATTGCAAGATTTTAGTAGGCCAGATAAGCGTAGCGCAGCAGGCACGCTCGCATGGTTAg                                                                                                                     >  1:1024163/1‑150 (MQ=37)

                                    ggAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAgcg                                                                                                                   >  2:2234006/1‑150 (MQ=255)

                                     gagaTGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAgcgc                                                                                                                  <  2:505755/150‑1 (MQ=255)

                                       gatgatCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATTCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAAATAAATAAAATGCAAGATTTTCGTAGGCCTGATAATCGTAGCGCATCAGGCACGCTCGCATGGGTAGCGccc                                                                                                                >  1:6625241/1‑149 (MQ=25)

                                            tctcCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATACGGCCAACAAAATAATGAAAATTAAATAAATTGCAAGATTTTAGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCAAGGTTAGCGCCAATaaa                                                                                                           >  1:487392/1‑150 (MQ=25)

                                               ccGCCCTTTTCTTATAGCTTCTTGCCGGATGTGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAatat                                                                                                        >  1:3590731/1‑150 (MQ=255)

                                                 gCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCg                                                                                                      >  2:4464373/1‑150 (MQ=255)

                                                  cccTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGa                                                                                                     <  2:8603246/150‑1 (MQ=255)

                                                   ccTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGat                                                                                                    >  2:5170011/1‑150 (MQ=255)

                                                     ttttCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGatat                                                                                                  >  2:16311/1‑150 (MQ=255)

                                                          ttATAGCTTGGTGCGGGTGGCGGGGTGACCGCCTTATCCGGCCAACAAAATCATGAAAATTCACTACTTGGCATGTTTTTGGTAGGCCTGTTATGGGTTGCGCATCTGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTcgcc                                                                                             <  1:7530826/150‑1 (MQ=255)

                                                           tataGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGATTAGCGCCATTAAATATCGATATTcgccg                                                                                            >  2:2839193/1‑150 (MQ=255)

                                                             taGCTTCTTGCCGGATGCGGCGTGAACCCCATAAACGGCCAAAAAAAAAAAGAAAATTAAAAAAAATTCAAGAATTTCGTAGGCCTGAAAAGAGTAGCGCATAAGGCACCCTCGCAAGGTTATCGCCAATAAATAAACATATTctccccg                                                                                          >  1:7899251/1‑147 (MQ=12)

                                                                 ttcttGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATTAAAATTAAATACTTTGCAAGTTTTTCGTAGGCGTTATATGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCa                                                                                      <  1:6260362/150‑1 (MQ=25)

                                                                    ttGCCGTATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCTTTAAATTTAAATACTTTGCATTATTTTCGTAGGCCTGATATGCTTAGCGCATCTGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAggg                                                                                   <  1:2090926/150‑1 (MQ=25)

                                                                      gCCGGATGCGGGGTGAACGCCTTATCCGGCCAACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTTGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCg                                                                                 <  1:5700106/150‑1 (MQ=255)

                                                                       ccGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATAGTCGCCGCTTTCAGGGCGt                                                                                >  2:564014/1‑150 (MQ=255)

                                                                        cGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGtt                                                                               <  2:2017061/150‑1 (MQ=255)

                                                                         ggATGCGGCGTGAACGCCTTATCCGGCCAACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTtc                                                                              <  2:5972792/150‑1 (MQ=255)

                                                                           aTGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTtctc                                                                            <  2:1833023/150‑1 (MQ=255)

                                                                           aTGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAAGACATTGCAAGTTTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTATCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTtctc                                                                            <  2:5847554/150‑1 (MQ=255)

                                                                             gcggcgTGACCGCCTTAGCCGGCCTACAACACCAGGAAAATTCAATCCCTGGCAAGATTTTCGTAGGCCTGATACGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCtt                                                                          <  1:4694463/150‑1 (MQ=255)

                                                                             gcggcgTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCtt                                                                          <  1:6503731/150‑1 (MQ=255)

                                                                               ggcgTGAACGCCTTATCCGGCCTACAAGATCATGAAAATTCAATACATTGCACGATTTTCGTAGGCCTGAGAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTACATATCGAGATTCGCCGCTTTCAGGGCGTTCTCTTCa                                                                        >  2:3955074/1‑150 (MQ=37)

                                                                               ggcgTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCa                                                                        <  2:7223122/150‑1 (MQ=255)

                                                                                gcgTGAACGCCTTATCCGGCCTACATAATCATCAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCaa                                                                       <  2:6603607/150‑1 (MQ=255)

                                                                                gcgTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCaa                                                                       >  2:4996220/1‑150 (MQ=255)

                                                                                gcgTGAACGCCTTAGCCGGCCTACAAAATCATGAAAATTAAATACCTTGCAAGATTTTCGTTGGCCTGATTAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATAGTCGCCGCTTTCAGGGCGTTCTCTTCaa                                                                       <  1:1798551/150‑1 (MQ=255)

                                                                                   tGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATaa                                                                    >  2:4665784/1‑150 (MQ=255)

                                                                                     aaCGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAAc                                                                  <  2:2642679/150‑1 (MQ=255)

                                                                                     aaCGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATAGTCGCCGCTTTCAGGGCGTTCTCTTCAATAAAc                                                                  <  1:3425082/150‑1 (MQ=255)

                                                                                      aCGCCTTCTCCGGCCTACAAAATCTTGTAAATTCAATACTTTGCAAGATTTTCTTAGGCCTGTTAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACg                                                                 <  1:8685079/150‑1 (MQ=38)

                                                                                          cTTCTCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACg                                                             <  2:7053317/150‑1 (MQ=255)

                                                                                           ttATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACgg                                                            >  2:7582650/1‑150 (MQ=255)

                                                                                            tATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTAAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGgc                                                           >  2:4788703/1‑150 (MQ=255)

                                                                                              tCCGGCATACAAAATAATGAAAATTCAATACTTTGCATGTTTTTCGTAGGCCTTATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGgcgc                                                         <  1:1531156/150‑1 (MQ=38)

                                                                                                cGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCgg                                                       >  1:7683423/1‑150 (MQ=255)

                                                                                                cGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCgg                                                       <  2:8716345/150‑1 (MQ=255)

                                                                                                 ggCCTACAAAATCATTAAAATTCAATACTTTGCAATATTTTCGTTGGCCTTATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGt                                                      <  2:1715417/150‑1 (MQ=39)

                                                                                                 ggCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGt                                                      >  1:2702694/1‑150 (MQ=255)

                                                                                                 ggCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGt                                                      >  1:581783/1‑150 (MQ=255)

                                                                                                 ggCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGt                                                      <  2:7895671/150‑1 (MQ=255)

                                                                                                  gCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGtt                                                     <  1:4160828/150‑1 (MQ=255)

                                                                                                   ccTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTc                                                    <  2:4038137/150‑1 (MQ=255)

                                                                                                   catACAAAATCATTAATATTAAATACATTGCTTGTTTTTCTTTGGCGTTATATGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCTGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTc                                                    <  1:2597526/148‑1 (MQ=255)

                                                                                                      aCAAAATCATCAAAATTCAATACATTGCAAGATTTTCGTAGGCATGATAAGCTTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAAc                                                 <  1:2430512/150‑1 (MQ=255)

                                                                                                         aaaTCACTACAATTCACTACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGAGATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGc                                              <  1:1688892/150‑1 (MQ=39)

                                                                                                          aaTCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCg                                             >  1:4027504/1‑150 (MQ=255)

                                                                                                           aTCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGt                                            <  1:3744876/150‑1 (MQ=255)

                                                                                                            tCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTc                                           <  1:1259606/150‑1 (MQ=255)

                                                                                                              aTGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGc                                         >  1:5515441/1‑150 (MQ=255)

                                                                                                                  aaaTTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACACACGGCGCGGTTCAACGGCGTCGCCCAt                                     >  1:4409366/1‑150 (MQ=255)

                                                                                                                        aaTACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCGTGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCgt                               >  2:6441403/1‑150 (MQ=255)

                                                                                                                         aTACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCgtg                              <  1:8509723/150‑1 (MQ=255)

                                                                                                                          tACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCgtgg                             <  2:7398064/150‑1 (MQ=255)

                                                                                                                           aCATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATAGTCGCCGCTTTCAGGGCGTTCTCTTCAATACACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCgtggt                            <  2:3420723/150‑1 (MQ=255)

                                                                                                                            cATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATCTTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCgtggtg                           <  2:2732303/150‑1 (MQ=255)

                                                                                                                             aTTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGa                          >  2:3195687/1‑150 (MQ=255)

                                                                                                                                 cAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGaacaa                      >  1:7823408/1‑150 (MQ=255)

                                                                                                                                  aaGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGaacaac                     >  1:287358/1‑150 (MQ=255)

                                                                                                                                  aaGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGaacaac                     >  1:5270045/1‑150 (MQ=255)

                                                                                                                                  aaGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGaacaac                     >  1:97939/1‑150 (MQ=255)

                                                                                                                                   aGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACt                    <  1:5412945/150‑1 (MQ=255)

                                                                                                                                    gATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTg                   <  2:4174276/150‑1 (MQ=255)

                                                                                                                                    gATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTg                   <  1:7349567/150‑1 (MQ=255)

                                                                                                                                     aTTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTgg                  >  1:829052/1‑150 (MQ=255)

                                                                                                                                      ttttCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGt                 <  1:6009669/150‑1 (MQ=255)

                                                                                                                                         tCGTAGGCCTTATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCgg              <  2:8474324/150‑1 (MQ=255)

                                                                                                                                           gTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCGgca            <  2:5265610/150‑1 (MQ=255)

                                                                                                                                               gCCTGATAAGCGTAGCGCatcaggcctacataatctctgcaatctattgaatttgcatgtttttgtaggccggataaggcgttcacgccgcatccggcatgaacaaagcgcactatgtcacaatctgaagcgggccagctgacccgctcg        <  2:2986582‑M2/150‑133 (MQ=255)

                                                                                                                                               gCCTGATAAGCGTAGCGCatcaggcctacaagagaattgcaatatgttgaatttgcacgattttgtaggccggataaggcgtttacgccgcatccggcataaacaaagcgcactttgtcaataatctgaagccccggccatgtgccgggg        <  2:1128961‑M2/150‑133 (MQ=255)

                                                                                                                                               gCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCGGCAGCaa        >  1:4307084/1‑150 (MQ=255)

                                                                                                                                                ccTGATAAGCGTAGCGCatcaggcctacacgtatcctgcaatatattgaatttgcaggtttttgtaggccggataaggcgttcacgccgcatccggcatgacaaagcgcacattgatatctgtctgagccccgctctgcggggatttttt       <  1:8142770‑M2/150‑134 (MQ=255)

                                                                                                                                                ccTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCGGCAGCAAt       <  2:4318475/150‑1 (MQ=255)

                                                                                                                                                  tGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCGGCAGCAATCg     >  1:2778758/1‑150 (MQ=255)

                                                                                                                                                   gATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCGGCAGCAATCGc    >  2:3584823/1‑150 (MQ=255)

                                                                                                                                                     tAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCGGCAGCAATCGCAt  <  1:4952912/150‑1 (MQ=255)

                                                                                                                                                     tAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCGGCAGCAATCGCAt  <  2:5488796/150‑1 (MQ=255)

                                                                                                                                                     tAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGGTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCGGCAGCAATCGCAt  <  1:6383444/150‑1 (MQ=255)

GGGATGATAATTGCGGATTGCAGAAATAAAAAGGGCGGAGATGATCTCCGCCCTTTTCTTATAGCTTCTTGCCGGATGCGGCGTGAACGCCTTATCCGGCCTACAAAATCATGAAAATTCAATACATTGCAAGATTTTCGTAGGCCTGATAAGCGTAGCGCATCAGGCACGCTCGCATGGTTAGCGCCATTAAATATCGATATTCGCCGCTTTCAGGGCGTTCTCTTCAATAAACGCACGGCGCGGTTCAACGGCGTCGCCCATCAGCGTGGTGAACAACTGGTCGGCAGCAATCGCAT  >  NC_000913/3877516‑3877814

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.