New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 = 1287084203 (0.370)21 (0.050) 17/236 NT 8.3% noncoding (153/171 nt) rttR rtT sRNA, processed from tyrT transcript
?NC_000913 1287557 = 289 (0.620)noncoding (66/85 nt) tyrT tRNA‑Tyr

Only 100 of 299 total aligned reads displayed.

TCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTT  >  NC_000913/1286936‑1287233
                                                                                                                                                    |                                                                                                                                                     
tCGTTGCCTGCGGCAACGCTCTCTCGCTGCCGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTa                                                                                                                                                      <  2:5944571/150‑1 (MQ=255)
tCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTc                                                                                                                                                      <  2:1265901‑M1/150‑2 (MQ=255)
tCGTGGCCTGCGGCAACGCCCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCTCATGTGCAGATAATTTGATTGCGGATTCGCTTGAGAGTTCATGGACTTTTGAAAGCGATGGTGGTGGGGGAAGGATTa                                                                                                                                                      <  1:3473515/150‑1 (MQ=17)
   ttGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTc                                                                                                                                                   <  1:1869080/150‑1 (MQ=255)
     gCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAg                                                                                                                                                 <  1:3744045/150‑1 (MQ=255)
           ggCAACGCTCTCTCGCTGTGGCTCGCGCGGACCCTGCGTCGAAGCTTCTCATCCGTCCCCGCTTGGGCAGAATCTTTGATTGCGGATTCGCTTGAGTGTTCTGGGACTTTTGACAGGGATGGTGGTGGGGGAAGGATTACTCAGCGCTgc                                                                                                                                           <  1:1911043/150‑1 (MQ=14)
            gCACCGCTCTCTCGCTGACGCGCGAGCCGAACCTTAGTCGAAGCTTCTCCTCCTTCCCCGCATGGGCAGACTATTTGATTGCGGATTCGCTTGAGTGTTCCGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTgcg                                                                                                                                          <  2:909928/150‑1 (MQ=14)
              aaCGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTgcgcg                                                                                                                                        >  2:4261294/1‑150 (MQ=255)
               aCGCTCTCTCGCTGTCGCTCCAGCCGAACCTTGGTCGAAGCTTCTCAGCCTTCCCCGCATGGGCAGACTATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTgcgcgc                                                                                                                                       <  1:1228603/150‑1 (MQ=14)
                 gCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCtt                                                                                                                                     <  2:7493555/150‑1 (MQ=255)
                   tctctcGCTGACGCTCGAGCCGAACCTTTGTCGAAGCTTCTCATCCGTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCg                                                                                                                                   <  1:3391116/150‑1 (MQ=255)
                         gCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGGTTGCTCGGCGCTGCGCGCTACGCCCTTc                                                                                                                             >  2:2329804/1‑150 (MQ=255)
                         gCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCATc                                                                                                                             >  1:5233032/1‑150 (MQ=255)
                          cTGACGCTCGAGCCGAACCTGAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCg                                                                                                                            <  1:4149613/150‑1 (MQ=255)
                                cTCGAGCCGAACCTTCGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGt                                                                                                                      <  2:8492213/150‑1 (MQ=255)
                                cTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGATAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttaca                                                                                                                      <  2:4841996‑M1/150‑34 (MQ=255)
                                 tCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGtt                                                                                                                     >  2:7873045/1‑150 (MQ=255)
                                      ccGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTg                                                                                                                >  1:7904659/1‑150 (MQ=255)
                                       cGAACCTTAGTCGAAGCTTCTCATCCGTCCCCGCATGGGCCGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAGGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGGCGtgtgcagc                                                                                                               >  1:3993171/1‑143 (MQ=14)
                                         aaCCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCgg                                                                                                             <  1:6921344/150‑1 (MQ=255)
                                         aaCCTTAGTCGAAGCTTCTCATCCGTCCCCGCATGGGCAGATTATTTGATTGGGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCgg                                                                                                             <  2:3911735/150‑1 (MQ=255)
                                            cTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGGGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCGTCGGGTCGTTGCCGGCGGCac                                                                                                          >  2:2162299/1‑149 (MQ=255)
                                             ttAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCCCTTCGCCCTTCGGGTCGTTGCCTGCGGCAAc                                                                                                         <  1:9000184/150‑1 (MQ=255)
                                               ggtCGAAGCTTCTCCTCCTTCCCAGCAATGGCAGCATATGTTATTTCGTATTCGTTTGTGACTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttgg                                                                                                       <  1:4398831‑M1/149‑49 (MQ=255)
                                                 tCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGctc                                                                                                     >  1:5135203/1‑150 (MQ=255)
                                                 tCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGcgc                                                                                                     >  1:8429405/1‑148 (MQ=255)
                                                   gAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGctctc                                                                                                   >  2:8829727/1‑150 (MQ=255)
                                                    aaGCTTCTCATCCTTCCCCGCATGGGCAGAATAGTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGctctcg                                                                                                  >  2:3739238/1‑149 (MQ=255)
                                                         tctcATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCATCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCCCAGCGCTCTCGcgg                                                                                             >  2:3272245/1‑148 (MQ=14)
                                                         tctcATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCGGCGGCAACGCTCTCTCGCTg                                                                                             >  1:6443519/1‑150 (MQ=255)
                                                             aTCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTTCGCGCTTCGCCCTTCGGGACGTTGCCTGGGGCAACGCTCACTCGCtttcgc                                                                                         >  2:6996762/1‑145 (MQ=14)
                                                                 ttCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGa                                                                                     >  2:6323706/1‑150 (MQ=255)
                                                                   ccccGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGATTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGt                                                                                   <  1:2419859/150‑1 (MQ=255)
                                                                         aTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCGTGCGGCAACGCTCTCTCGGTGGCGGTGGTGTGGAAcg                                                                             >  2:7688456/1‑149 (MQ=14)
                                                                          tGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTGGCCGGCGGCAACCCGCTCACGCTGGCGCTCGAGTCGAACCt                                                                            >  1:4650132/1‑150 (MQ=14)
                                                                             gCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCg                                                                                                <  1:6246000/127‑1 (MQ=40)
                                                                              cAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCCGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGt                                                                        <  1:2260113/150‑1 (MQ=255)
                                                                                gAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCATCGCCCTTCGGTTCGATTCCTCACGCAAAGCACTCTCGCTGGCCCTAGAGTCGAACCTTGGTCg                                                                      >  2:1038486/1‑150 (MQ=14)
                                                                                        aatTGCGGATTCGTGGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggc                                                              <  1:5671099‑M1/149‑90 (MQ=255)
                                                                                          ttGCGGATTCGTTGGGAAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcct                                                            >  2:6728683‑M1/1‑59 (MQ=255)
                                                                                          ttGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCa                                                            <  2:199618/150‑1 (MQ=255)
                                                                                          ttGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGAGGCAACGATCTCTCGCTGTCGCTCGAATCGAACCTTTGTCGAAtcttctaa                                                            >  2:3608033/1‑148 (MQ=14)
                                                                                             cGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTTGCGCTCGAGTCGAACCTTGGTCGAAGCATCTCATcc                                                         >  2:5071224/1‑150 (MQ=255)
                                                                                                 ttCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCatccatcc                                                     >  1:7603973/1‑150 (MQ=255)
                                                                                                 ttCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTcc                                                     <  2:6050265/150‑1 (MQ=255)
                                                                                                 ttCGCTTGAGAGTTCAGGGACTGTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCCGCGCTGCGCGCATCGCCCTTCGGGACGTTGCCTGAGGCAACGCTCTCTCGCTTTCGCTCGCCGCGAACCGTCGTCGAAGGTTCTCACCCTTcc                                                     >  2:2944905/1‑150 (MQ=14)
                                                                                                    gCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCGCGCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTATCATACGTccccc                                                  >  1:8180784/1‑149 (MQ=14)
                                                                                                     cTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTAATCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCAGCGGCAACGATATCTCGCAGTCGCTCGAGTCGAAACTTGGTCGAAGCTTCTCAACCATaccccc                                                 >  1:1449013/1‑148 (MQ=14)
                                                                                                     cTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTAATCAGCGCTGCGCGCTTCGCCCTTCGGGACGTTGCCAGCGGCAACGCTCTCACGCTGTCGCTCGAGTCGAACCTTGGTAGAAGCTTCTCATCCTTCCCCGc                                                 >  1:5923017/1‑150 (MQ=14)
                                                                                                      ttGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCACGAGTCGAAACTTTGTCGAAGCTTCTCAACCATCCCCGCa                                                >  2:1864535/1‑150 (MQ=14)
                                                                                                      ttGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCACTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCa                                                >  2:1434336/1‑150 (MQ=255)
                                                                                                      tgggaagttcagGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatcaattttactggcctgctaacatatcg                                                >  2:3524784‑M1/6‑47 (MQ=255)
                                                                                                       tGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCAt                                               <  1:9195540/150‑1 (MQ=255)
                                                                                                        gagaGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTat                                                                                                                                                     <  1:4810251/47‑2 (MQ=255)
                                                                                                        gagaGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTat                                                                                                                                                     >  2:4810251/1‑46 (MQ=255)
                                                                                                        gagaGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAAAGATCTCTCGCTTTCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCAACCTTACCCgaagg                                              >  2:4965258/1‑146 (MQ=14)
                                                                                                            gTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCa                                          <  2:9217429/150‑1 (MQ=255)
                                                                                                            gTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCAACCTTCCCCGCTTGGGcc                                          >  2:6932973/1‑149 (MQ=255)
                                                                                                             ttCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGACGTTGCCTGCGGCAACCCTCTCACGCGGGCCCACCAGGAGAACCCTGGTCGAAGCAGCGCAACCTTCCCCGCCTGGGccg                                         >  2:1893735/1‑148 (MQ=14)
                                                                                                             gtcAGGGACTTTGGAACGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcg                                         <  2:4462277‑M1/149‑111 (MQ=255)
                                                                                                               cAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACCCTCTCAAGCTTGCGCTCCAGTCGAACCGTGGTCGAAGATTCAAATCCGACCCCGCAgggggcgcc                                       >  1:3576834/1‑145 (MQ=14)
                                                                                                                aGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTc                                                                                                                        <  1:1584633/68‑1 (MQ=37)
                                                                                                                aGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAat                                      >  2:8131963/1‑150 (MQ=40)
                                                                                                                aGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATT                                                                                                                                                       >  2:4575024‑M1/1‑37 (MQ=255)
                                                                                                                  ggACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCAGGCGCACGAGTCGAAACGTGGTCGAAGCTTAACATCCATACCCCCATGGGCAGAaaat                                    >  2:5543307/1‑150 (MQ=14)
                                                                                                                  ggACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCAGCGGCAACCCTCGCTCGCGGGCGCGCGAGTCGAACCAGGGTCGCAGCCTCGCATACATCCCCCCCGGGGCCGCatat                                    >  1:1037386/1‑150 (MQ=14)
                                                                                                                    aCTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATAttt                                  >  2:1763773/1‑150 (MQ=38)
                                                                                                                      ttttGAAAGTGATGGTGGTGGGGGAAGGATTACTCATCGCTGCGCTCTTCGCCCTTCGGGACGTGGACTTCGACAACGCGATCTCGCTGCCGCTAGAGTAGAACCTTGGTCGACGCTTCACAAACTTCCCCGCATGGGCAGAATAGTTaa                                >  2:6843759/1‑150 (MQ=11)
                                                                                                                      ttttGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCTCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCATCTCATCCTTCCCCCCAAGTGCAGAATATTTaa                                >  2:5845891/1‑150 (MQ=11)
                                                                                                                       tttGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAAt                               <  1:6825391/150‑1 (MQ=39)
                                                                                                                        ttgtcaatgatggtgGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcat                              <  1:5584589‑M1/143‑122 (MQ=255)
                                                                                                                          gAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGc                            <  1:3167044/150‑1 (MQ=39)
                                                                                                                           aaaGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccagggggtaatgct                                                                        >  2:7108981‑M1/1‑26 (MQ=255)
                                                                                                                           aaaGTGATGGTGGTGGGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccagggggtaatgct                                                                        <  1:7108981‑M1/105‑80 (MQ=255)
                                                                                                                           aaaGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCGCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCAAACATCCCCGCATGGGCCGAATAATTAATTGCg                           >  2:7851555/1‑150 (MQ=14)
                                                                                                                               cgATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCCAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGAtt                       >  2:5726925/2‑150 (MQ=18)
                                                                                                                                 aTGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCAGCCGCCACCCACACACGCAGGCCCACCAGTCGAACCATGGTCGAAACTTCACAACCATCCCCCCCGGGGCCGAAAAATTAATTGCGGAGTCg                     >  1:7561592/1‑150 (MQ=2)
                                                                                                                                  tggtggtggGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgac                    >  1:8825262‑M1/1‑19 (MQ=255)
                                                                                                                                    gtggtggGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgc                  <  1:8017326‑M1/150‑134 (MQ=255)
                                                                                                                                     tggtggGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcg                 >  1:7227726‑M1/1‑16 (MQ=255)
                                                                                                                                     tggtggGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTgg                 >  2:5690665/1‑150 (MQ=38)
                                                                                                                                      ggtggGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcgtcatttgatatgatgcgc                <  2:1343900‑M1/150‑136 (MQ=255)
                                                                                                                                        tggGGGAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccg              >  1:2888700‑M1/1‑13 (MQ=255)
                                                                                                                                        tggGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTAGCTGGCGCGCGAGTCGAACCGTGGTCGAAGCGTCGCATACGTCCCCGCCTGGGCCGGATGTTTAAGTGGGGATTCGGTgggga              >  2:4153713/1‑148 (MQ=11)
                                                                                                                                          ggggAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgct            >  1:3035220‑M1/1‑11 (MQ=255)
                                                                                                                                           gggAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctg           <  1:8070098‑M1/150‑141 (MQ=255)
                                                                                                                                            ggAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgt          >  2:537670‑M1/1‑9 (MQ=255)
                                                                                                                                            ggAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTTGCGCTCGAGTCGAAGAGGGGTCGAAGCTTCAAAACCTTACCCCCGTGGGCAGAAAAATTAATTGCCGGTTGGTTGGGAAGGTc          >  2:278638/1‑150 (MQ=14)
                                                                                                                                            ggAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCAGCGGCAACGCTCTCTCGATGGCGCTCGAGGCGCACCTTGGGCGACGCTTCTCATCCGTCCCCGCATGGGCCGGATAGTTCATTGCGGGTTCGGTggggcggtc          >  2:4328849/1‑144 (MQ=11)
                                                                                                                                             gAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacgggtaaatgcaatttactggactgcacccttatcgggaagcggggcgcataatagcaatagacgcgccgctgaa         >  2:8726596‑M1/1‑8 (MQ=255)
                                                                                                                                             gAAGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgta         >  1:6716148‑M1/1‑8 (MQ=255)
                                                                                                                                              aaGGATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaa        >  1:2064369‑M1/1‑7 (MQ=255)
                                                                                                                                              aaGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAg        <  1:4493808/150‑1 (MQ=255)
                                                                                                                                                ggATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaag      >  1:4947689‑M1/1‑5 (MQ=255)
                                                                                                                                                ggATTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaag      >  2:8315172‑M1/1‑5 (MQ=255)
                                                                                                                                                  aTTcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtg    <  1:2509824‑M1/150‑148 (MQ=255)
                                                                                                                                                   ttcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatga                     <  1:3115645‑M1/132‑131 (MQ=255)
                                                                                                                                                    tcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctgtaaagtgtt  >  2:1120340‑M1/1‑1 (MQ=255)
                                                                                                                                                    tcgaaccttcgaagtcgatgacggcagatttacagtctgctccctttggccgctcgggaaccccaccacggggtaatgctttttactggcctgctcccttatcgggaagcggggcgcatcatatcaaatgacgcgccgctggaaagtggt  >  2:3100155‑M1/1‑1 (MQ=255)
                                                                                                                                                    tACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACtt  <  2:7258917/150‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                     
TCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTACTCAGCGCTGCGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGGCGCTCGAGTCGAACCTTGGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTAATTGCGGATTCGTTGGGAAGTTCAGGGACTT  >  NC_000913/1286936‑1287233

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.