| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,454,266 | C→A | 7.9% | pseudogene (736/2646 nt) | yfcU ← | pseudogene, FimD fimbrial export usher family;putative membrane; Not classified; putative outer membrane protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,454,266 | 0 | C | A | 7.9% | 1905.5 / 19.3 | 634 | pseudogene (736/2646 nt) | yfcU | pseudogene, FimD fimbrial export usher family;putative membrane; Not classified; putative outer membrane protein |
| Reads supporting (aligned to +/- strand): ref base C (287/272); new base A (2/73); total (289/345) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.86e-19 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 654 total aligned reads displayed.
TGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGACCGTCCCGTTGCCGC > NC_000913/2454117‑2454415 | tGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGc > 1:5971257/1‑150 (MQ=255)tGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGc < 2:2915069/150‑1 (MQ=255)tGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGc > 1:8558150/1‑150 (MQ=255)gggCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCTGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGc < 1:7045358/149‑1 (MQ=255) gcgcGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCat > 2:4789042/1‑150 (MQ=255) cgcgTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCata > 2:7658628/1‑150 (MQ=255) gcgTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCataa > 1:3429723/1‑150 (MQ=255) gcgTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCataa > 2:5497887/1‑150 (MQ=255) gcgTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCataa < 2:8794162/150‑1 (MQ=255) gcgTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCataa > 2:1334417/1‑150 (MQ=255) cgTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAACACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCataat > 1:3582633/1‑150 (MQ=255) gTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCataata < 2:6103135/150‑1 (MQ=255) tAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAg > 2:7207827/1‑150 (MQ=255) cgcgCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGac < 2:2109840/150‑1 (MQ=255) cgcgCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGac < 2:5689955/150‑1 (MQ=255) gcgcAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGact > 1:7486937/1‑150 (MQ=255) cgcAGTTTGGGAGGCAACATTTGATCGTCTGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGATTTGAGGTAATCTTCGCCCAGCGCCTGTTGGGCTTTTAATGAGGGTAACGCCCGCCCGGCATAATCGCGactc < 2:4352955/150‑1 (MQ=255) aTTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGactccactc > 1:5578871/1‑150 (MQ=255) ggAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCAt > 2:5963127/1‑150 (MQ=255) gAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCAtt > 1:1265039/1‑150 (MQ=255) cAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCAtttttt > 1:8402891/1‑150 (MQ=255) aaCATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCAttttttt > 1:3717021/1‑150 (MQ=255) aCATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCAtttttttt > 1:2267257/1‑150 (MQ=255) cATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTtg > 1:572740/1‑150 (MQ=255) tttGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCAtttttttgtgt > 2:3067048/1‑146 (MQ=255) tttGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTtgtg > 2:149390/1‑150 (MQ=255) tttaTCGTCTGTGCTGACACTGCCACCAACATAATTAAAACCTTCTAAAATATCGTAATTGAGTTAATCTTCGCCAAGCGCAATTTTGGATTTTAATGACGGTAACGCCCGCCTGGAATAATAGCGACTCCACTCCCATTTTTTTtgtgt < 2:3584813/147‑1 (MQ=255) aTCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTc > 2:2536520/1‑150 (MQ=255) aTCGTCAGTGCTGACACTACCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTc > 2:2318379/1‑150 (MQ=255) tCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGTGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCa < 2:5254572/150‑1 (MQ=255) gTCAGTGCTTACACTGCCACAAACATAATTAAAACCGTCTAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATc < 2:9133343/150‑1 (MQ=255) gTCAGTGCTGACACTGCCACCAACATATTTAAAACGTTCTAAAATATCGGAATGGTGTTATTCTGCGCCCCGCGCCAGTTGGGATTTTATTGCCGTTAACGCCCGCCTGGCTTAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATc < 2:3470364/150‑1 (MQ=255) tgTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGTATTTGAGGTAATCTTCGCCCCGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATcgcc < 2:6302529/149‑1 (MQ=255) tGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATcgccgc > 1:2749672/1‑150 (MQ=255) tGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCaa > 1:8964914/1‑150 (MQ=255) aaacccccacaaACAAAATAAAAACCTACCAAAATAACCAAATTCACCAAATCTACCCCCACCCCAAGTTTGTATTTTAATCACGCTAACCCCCCCCAGCAATAAAAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAAt < 1:5204102/144‑1 (MQ=255) cacTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAAtt > 2:8406969/1‑150 (MQ=255) acTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTc > 2:6673817/1‑150 (MQ=255) cgcaaccaACATAATTAAAACCGTCTAAAATATGGGATTTGTGTTAATCTTCGCCCCGCGCCTGTTTGGTTTTTATTGAGGTTACCGCCCGCCCGGAATAATCGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCAt < 1:9201003/146‑1 (MQ=255) aaCATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGtcatc > 1:1712523/1‑150 (MQ=255) aaCATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGtcatc > 2:7254548/1‑150 (MQ=255) aaCATAATTAAAACCGTCGAAAATAGCGTAATTGAGGTAATCTGCGCCCAGCGCCAGTTTGGCTTTTAATGACGTTAACGCCCGCCAGGAATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGtcatc < 2:4419503/150‑1 (MQ=255) cATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGtcatcat > 1:4769217/1‑150 (MQ=255) ttAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTa > 1:7242330/1‑150 (MQ=255) aaaCCTTCTAATATATCTTATTTGAGTTATTCTTCGCCCAGCGCCTTTTTTTATTTTAATTAGGTTACCGCCCGCCTGGCAAAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTg < 1:149246/150‑1 (MQ=255) aaCCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTgc > 1:7595117/1‑150 (MQ=255) aaCCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTgc > 2:1963389/1‑150 (MQ=255) aCCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTgcg < 2:2153803/150‑1 (MQ=255) ccGTCTAAAATATCGGATTTGAGGTAATCTCCGCCCCGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTgcgc < 1:4610448/150‑1 (MQ=255) ccGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCTGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTgcgc < 2:7975916/150‑1 (MQ=255) ccGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTgcgc > 1:8048294/1‑150 (MQ=255) cGAAAATATCGTAATTGCGTTAATCTTCGCCCAGCGCAATTTTGGCTTTTAATGACGGTACCGCCCGCCAGGAATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTAt < 1:2459218/150‑1 (MQ=255) gAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATg > 2:6519132/1‑150 (MQ=255) aaaaTATCGGAATTGAGGTAATCTTCGCCCTGCGCCTTTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGt < 1:6202922/150‑1 (MQ=255) aaaaTATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGt < 2:6866497/150‑1 (MQ=255) aaaTATGGCATTTGTGTTAATCTGCGCCCAGCGCCTGTTTGTATTTTAATGACGTTAACGCCCGCCAGGAATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGtt < 1:67345/150‑1 (MQ=255) aaaTATCGTAATTGAGGTAATCTTCGCCCAGCGCCAGTTGGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATCGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGtt < 2:181163/150‑1 (MQ=255) atatCGTATTTGAGGTAATCTTCGCCCAGCGCCTGTTTGGATTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGa < 1:7155780/150‑1 (MQ=255) gtaaTTGTGGAAATCTCCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGtt < 1:267053/148‑1 (MQ=255) gtaaTTGAGGTAATCTGCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGAATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGtt < 1:2110229/148‑1 (MQ=255) ggAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGtt < 1:1333736/150‑1 (MQ=255) gcatttGAGGTAATCTTCGCCCAGCGCCTGTTTGGATTTTAATGACGTTACCGCCCGCCTGGAATAATCGCGACTCCACTCCCA‑TTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTg < 2:3910207/146‑1 (MQ=255) aTTGAGTTAATCTTCGCCCAGCGCCAGTTGGGCTTTTAATGACGGTAACGCCCGCCAGGAATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGt < 1:7415003/150‑1 (MQ=255) aTTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGt < 1:5116368/150‑1 (MQ=255) aTTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGAGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGt > 2:7021870/1‑150 (MQ=255) tgtggTTATCTTCGCCCCGCGCCTGTTTGGATTTTAATGAGGGTAACGCCCGCCCGGCATAACCGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCt < 1:3136124/147‑1 (MQ=255) gTAATCTTCGCCCAGCGCCTGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCa < 2:8267452/150‑1 (MQ=255) tAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAg > 1:2002438/1‑150 (MQ=255) tCTTCGCCCCGCGCCTTTTTGGCTTTTAATGACGGTAACGCCCGCCAGGAATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCa < 2:4154548/150‑1 (MQ=255) tCTTCGCCCAGCGCCTTTTTGGCTTTTAATGACGTTAACGCCCGCCCGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCa < 1:1082882/150‑1 (MQ=255) tCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAgcg < 2:2750316/150‑1 (MQ=255) cGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAgcgc < 1:6363199/150‑1 (MQ=255) gCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAgcgcg < 1:1014731/150‑1 (MQ=255) ccAGCGCCTGTTTGGCTTTTACTGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCa < 1:4957152/150‑1 (MQ=255) ccAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATATCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCAACATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCa > 1:8671503/1‑150 (MQ=255) ccAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCa > 1:4914909/1‑150 (MQ=255) gcCTGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGc < 1:4283650/150‑1 (MQ=255) ccAGTTTGGCTTTTAATGACGGTAACGCCCACCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCAACATTACTGCGCGTATGTTGATAGTTGGTCTGCCCGTCAGCGCGCAAACGcc > 1:4465897/1‑150 (MQ=255) cattttGGCTTTTATTGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCa < 2:111368/147‑1 (MQ=255) cAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCa < 1:8185989/150‑1 (MQ=255) ttGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGc < 1:6519132/150‑1 (MQ=255) tgggCTTTTAATGACGGTACCGCCCGCCCGGCATAAGAGCGACTCTACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGc < 2:5367434/148‑1 (MQ=255) ttttAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAg < 1:539777/150‑1 (MQ=255) ttttAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAg > 2:7778352/1‑150 (MQ=255) ttttAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAg > 1:8793834/1‑150 (MQ=255) aTGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGtcatcat > 1:2943265/1‑84 (MQ=255) aTGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTaa < 2:7372745/150‑1 (MQ=255) tGAGGGTAACGCCCGCCAGGAATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAAc < 2:3347654/150‑1 (MQ=255) aCGGTAACGCCCGCCCGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAAccc < 2:8653327/150‑1 (MQ=255) aCGGTAACGCCCGCCAGGAATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAAccc < 2:1932779/150‑1 (MQ=255) gTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGa < 2:7521840/150‑1 (MQ=255) gTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGa > 1:1919870/1‑150 (MQ=255) tAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGAc > 2:1658420/1‑150 (MQ=255) gcccgccAGGCATAATCGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGACCGTc < 2:3755012/150‑1 (MQ=255) gcccgccAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGACCGTc < 1:4235914/150‑1 (MQ=255) gcccgccAGGAATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGACCGTc < 1:7768669/150‑1 (MQ=255) ccgccAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGACCGTccc < 1:3864676/150‑1 (MQ=255) ccgccAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGACCGTccc > 1:3643611/1‑150 (MQ=255) ccgccAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGACCGTccc < 1:3297255/150‑1 (MQ=255) aGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGACCGTCCCGTTGc < 2:5134115/150‑1 (MQ=255) | TGGCGCGTAGCCGCGCAGATTGGGAGGCAACATTTGATCGTCAGTGCTGACACTGCCACCAACATAATTAAAACCGTCGAAAATATCGGAATTGAGGTAATCTTCGCCCAGCGCCAGTTTGGCTTTTAATGACGGTAACGCCCGCCAGGCATAATAGCGACTCCACTCCCATTTTTTTTGTGTGTCATCGCCGCCAAATTCATCGTCATCATCATTACTGCGCGTATGTTGATAGTTGGTCTGCCAGTCAGCGCGCATACGCCATGGCCCCAGGTTAACCCCGACCGTCCCGTTGCCGC > NC_000913/2454117‑2454415 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |