BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2466384	88 (1.350)	9 (0.160)	7/224	NT	13.6%	intergenic (+1/‑161)	argW/intS	tRNA‑Arg/CPS‑53 (KpLE1) prophage; putative prophage CPS‑53 integrase
*	?	NC_000913	2476600 =	37 (0.650)	9 (0.160)	7/224	NT	13.6%	intergenic (+2/+94)	pawZ/dsdC	tRNA‑OTHER/dsd operon activator; autorepressor

Only 100 of 110 total aligned reads displayed.

ATCGAGCGGCAGCGTACTTACCCCGCACTCCATTAGCGGGTATACTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATT  >  NC_000913/2466252‑2466523

aTCGAGCGGCAGCGTACTTACCCCGCACTCCATTAGCGGGTATACTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAg                                                                                                                                      >  1:371177/1‑140 (MQ=255)

 tCGAGCGGCAGCGTACTTACCCCGCACTCCATTAGCGGGTATACTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGt                                                                                                                                     >  1:433976/1‑140 (MQ=255)

 tCGAGCGGCAGCGTACTTACCCCGCACTCCATTAGCGGGTATACTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGt                                                                                                                                     >  1:1074583/1‑140 (MQ=255)

 tCGAGCGGCAGCGTACTTACCCCGCACTCCATTAGCGGGTATACTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGt                                                                                                                                     >  1:904269/1‑140 (MQ=255)

 tCGAGCGGCAGCGTACTTACCCCGCACTCCATTAGCGGGTATACTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGt                                                                                                                                     >  1:329699/1‑140 (MQ=255)

 tCGAGCGGCAGCGTACTTACCCCGCACTCCATTAGCGGGTATACTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGt                                                                                                                                     >  1:311044/1‑140 (MQ=255)

 tCGAGCGGCAGCGTACTAACCCCGCACTCCATTAGCGGGTATACTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGt                                                                                                                                     >  1:306434/1‑140 (MQ=255)

  cGAGCGGCAGCGTACTTACCCCGCACTCCATTAGCGGGTATACTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGtt                                                                                                                                    <  1:1027830/140‑1 (MQ=255)

  cGAGCGGCAGCGTACTTACCCCGCACTCCATTAGCGGGTATACTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGtt                                                                                                                                    <  1:478913/140‑1 (MQ=255)

  cGAGCGGCAGCGTACTTACCCCGCACTCCATTAGCGGGTATACTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGtt                                                                                                                                    <  1:1027792/140‑1 (MQ=255)

   gAGCGGCAGCGTACTTACCCCGCACTCCATTAGCGGGTATACTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGTGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATccttgtgttt                                                                                                                                   <  2:622885‑M1/140‑11 (MQ=255)

       ggCAGCGTACTTACCCCGCACTCCATTAGCGGGTATACTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTc                                                                                                                               <  1:8888/140‑1 (MQ=255)

       ggCAGCGTACTTACCCCGCACTCCATTAGCGGGTATACTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTc                                                                                                                               <  2:303272/140‑1 (MQ=255)

       ggCAGCGTACTTACCCCGCACTCCATTAGCGGGTATACTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTc                                                                                                                               <  2:355988/140‑1 (MQ=255)

        gCAGCGTACTTACCCCGCACTCCATTAGCGGGTATACTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTcc                                                                                                                              <  1:390494/140‑1 (MQ=255)

           gCGTACTTACCCCGCACTCCATTAGCGGGTATACTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCAt                                                                                                                           <  2:1010403/140‑1 (MQ=255)

                   aCCCCGCACTCCATTAGCGGGTATACTCATGCCGCATTGTCCTCTTAGTTAAATGGCTATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATccttgtgtgtatccctaaaaccacat                                                                                                                   >  1:737484‑M1/1‑114 (MQ=255)

                         cACTCCATTATCGGGTATACTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTATTAGCAGGTTCGATTCCTGCAGGGGACACCATcctagtgtttatccctaaaaccacatgtaaac                                                                                                             >  2:584487‑M1/1‑108 (MQ=255)

                         cACTCCATTAGCGGGTATACTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGc                                                                                                             >  2:341000/1‑140 (MQ=255)

                            tCCATTAGCGGGTATACTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCaaa                                                                                                          <  1:721607/140‑1 (MQ=255)

                                   gCGGGTATACTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCt                                                                                                   <  2:600852/140‑1 (MQ=255)

                                        tataCTCATGCCGCATTGTCCTCTTAGTTAATTGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATACCTGCAGGGGACACGATTGATCAGTTCGCTGCCATCCGTACCAGTCCGCAAAATCCCCTGagtc                                                                                              >  2:1071625/1‑137 (MQ=255)

                                        tataCTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATccttgtgtttatccctaaaaccacataaaaaccgtaaattaaattcg                                                                                              >  1:928775‑M1/1‑93 (MQ=255)

                                        tataCTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATccttgtgtttatccctaaaaccacataaaaaccgtaaattaaattcg                                                                                              >  1:766569‑M1/1‑93 (MQ=255)

                                        tataCTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATccttgtgtttatccctaaaaccacataaaaaccgtaaattaaattcg                                                                                              >  1:766381‑M1/1‑93 (MQ=255)

                                        tataCTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAata                                                                                              >  2:175685/1‑140 (MQ=255)

                                        tataCTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAata                                                                                              >  1:959243/1‑140 (MQ=255)

                                        tataCTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAata                                                                                              >  1:761073/1‑140 (MQ=255)

                                        tataCTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAata                                                                                              >  1:714610/1‑140 (MQ=255)

                                        tataCTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAata                                                                                              >  1:210738/1‑140 (MQ=255)

                                          taCTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATc                                                                                            >  2:175957/1‑140 (MQ=255)

                                               aTGCCGCATTGTGCTCTTAGTTAAATGGATAGAACGAGCCCCTCCTATGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATccttgtgtttatccataaaaccacataaaaacagtaagttaaattcgaactagc                                                                                       >  2:1003797‑M1/1‑86 (MQ=255)

                                                 gCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTTCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCTTCCGTACCAGTCCGCAAAGTCCCCTGAATATCAAGCAtt                                                                                     >  2:1105189/1‑140 (MQ=255)

                                                 gCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCAtt                                                                                     >  1:385399/1‑140 (MQ=255)

                                                 gCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCAtt                                                                                     >  1:106861/1‑140 (MQ=255)

                                                 gCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCAtt                                                                                     >  1:432680/1‑140 (MQ=255)

                                                 gCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCAtt                                                                                     >  1:774009/1‑140 (MQ=255)

                                                  ccGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTc                                                                                    <  1:734733/140‑1 (MQ=255)

                                                    gCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAATGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGAAAAATCCCATGAATATCAAGCATTCCg                                                                                  <  1:23394/140‑1 (MQ=255)

                                                    gCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCg                                                                                  <  1:1126310/140‑1 (MQ=255)

                                                    gCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCg                                                                                  >  2:269964/1‑140 (MQ=255)

                                                    gCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCg                                                                                  >  2:755277/1‑140 (MQ=255)

                                                       ttGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAg                                                                               <  2:371177/140‑1 (MQ=255)

                                                         gTCCTCTTAGTTTAATTGATTTATCGATCCCCTCCTTAGGGCTATTTTCAGGTTCGATTCCTGCAGGGGACACCATTTATCTGTTCGCTCCCATCCGTAACAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGAt                                                                             <  2:1189086/140‑1 (MQ=255)

                                                               ttAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAg                                                                       >  1:1084935/1‑140 (MQ=255)

                                                                tAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGt                                                                      >  1:325199/1‑140 (MQ=255)

                                                                     aaaTGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGGTCGATTCCTGCAGGGGACACCATccttgtgtttatccctaaaaccacataaaaaccgtaaattaaattcgaactagcaggccgaataaggcacaccagg                                                                 <  1:626596‑M1/140‑77 (MQ=255)

                                                                      aaTGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCa                                                                <  1:551562/140‑1 (MQ=255)

                                                                          gATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGt                                                            <  2:622873/140‑1 (MQ=255)

                                                                                   aGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCAGTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAg                                                   >  2:335976/1‑140 (MQ=255)

                                                                                    gCCCCTCCTAAGGGCTTATTTCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCACATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGa                                                  <  2:327483/140‑1 (MQ=255)

                                                                                    gCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGa                                                  <  2:172591/140‑1 (MQ=255)

                                                                                         tcctAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGtt                                             <  2:1084935/140‑1 (MQ=255)

                                                                                          cctAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTg                                            >  2:802681/1‑140 (MQ=255)

                                                                                            tAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGAc                                          <  2:734071/140‑1 (MQ=255)

                                                                                              aGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAg                                        <  2:311044/140‑1 (MQ=255)

                                                                                                ggCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGcc                                      >  2:980167/1‑140 (MQ=255)

                                                                                                 gCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCg                                     <  1:47850/140‑1 (MQ=255)

                                                                                                 gCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCg                                     <  2:716895/140‑1 (MQ=255)

                                                                                                 gCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCAGTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCg                                     <  2:760852/140‑1 (MQ=255)

                                                                                                 gCTAATTGCAGGTTCGATTACTGCAGGGGACACCATATATCTGTTCTCTCCCATCCGTACCAGTACGAAAAATCCCCTGAATATAAATCATTCAGTAGATTTACAGTTCGTCATGGTTCGATTCAGTTCGTTGACAGCCg                                     <  2:1180065/140‑1 (MQ=255)

                                                                                                  cTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGc                                    >  1:727191/1‑140 (MQ=255)

                                                                                                    aaTTGCAGGTTCGATTCGTGCAGGGGACACCATTGATGAGTTCGCTCCCATCCGTACCAGTCCGCAATATCCCCTGAATATCAAGCTTTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACTGCCGCAc                                  <  2:664554/140‑1 (MQ=255)

                                                                                                     tttGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATACCGGAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACt                                 >  2:1035335/2‑140 (MQ=255)

                                                                                                     aTTGCAGGTTCGATTCCTGCAGGGGACACCATccttgtgtttatccctaaaaccacataaaaaccgtaaattaaattcgaactagcaggccgaataaggcacaccaggaactcgtggttttattcattatgaagtggttt                                 >  1:122977‑M1/1‑32 (MQ=255)

                                                                                                     aTTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACt                                 >  1:633372/1‑140 (MQ=255)

                                                                                                     aTTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACt                                 >  1:971101/1‑140 (MQ=255)

                                                                                                       tGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCTTTGACAGCCGCACTcc                               >  1:1204225/1‑140 (MQ=255)

                                                                                                          aGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATg                            >  1:984284/1‑140 (MQ=255)

                                                                                                          aGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATg                            >  2:655327/1‑140 (MQ=255)

                                                                                                          aGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATg                            >  2:496858/1‑140 (MQ=255)

                                                                                                          aGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATg                            >  1:156637/1‑140 (MQ=255)

                                                                                                          aGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATg                            >  1:876869/1‑140 (MQ=255)

                                                                                                          aGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATg                            >  1:875750/1‑140 (MQ=255)

                                                                                                          aGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATg                            >  2:496784/1‑140 (MQ=255)

                                                                                                          aGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGAAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACCCCATg                            >  1:984947/1‑140 (MQ=255)

                                                                                                                gATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGt                      <  2:227634/140‑1 (MQ=255)

                                                                                                                     cTGCAGGGGACACCATccttgtgtttatccctaaaaccacataaaaaccgtaaattaaattcgaactagcaggccgaataaggcacaccaggaactcgtggttttattcattatgaagtggtttttacctgttctcttag                 <  2:142365‑M1/140‑125 (MQ=255)

                                                                                                                      tGCAGGGGACACCATccttgtgtttatccctaaaaccacataaaaaccgtaaattaaattcgaactagcaggccgaataaggcacaccaggaactcgtggttttattcattatgaagtggtttttacctgttctcttagc                <  2:936555‑M1/140‑126 (MQ=255)

                                                                                                                      tGCAGGGGACACCATccttgtgtttatccctaaaaccacataaaaaccgtaaattaaattcgaactagcaggccgaataaggcacaccaggaactcgtggttttattcattatgaagtggtttttacctgttctcttagc                >  1:615707‑M1/1‑15 (MQ=255)

                                                                                                                      tGCAGGGGACACCATccttgtgtttatccctaaaaccacataaaaaccgtaaattaaattcgaactagcaggccgaataaggcacaccaggaactcgtggttttattcattatgaagtggtttttacctgttctcttagc                >  1:322214‑M1/1‑15 (MQ=255)

                                                                                                                      tGCAGGGGACACCATccttgtgtttatccctaaaaccacataaaaaccgtaaattaaattcgaactagcaggccgaataaggcacaccaggaactcgtggttttattcattatgaagtggtttttacctgttctcttagc                >  1:476608‑M1/1‑15 (MQ=255)

                                                                                                                      tGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACTGTTCGTCTTGGTTCGCTTCAGATCGGTGACAGACGCACTCCATGACGGGTAAATAg                >  2:1224142/1‑140 (MQ=255)

                                                                                                                      tGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAg                >  2:470501/1‑140 (MQ=255)

                                                                                                                      tGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAg                >  2:470543/1‑140 (MQ=255)

                                                                                                                      tGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAg                >  1:928886/1‑140 (MQ=255)

                                                                                                                      tGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAg                >  1:928861/1‑140 (MQ=255)

                                                                                                                       gCAGGGGACACCATccttgtgtttatccctaaaaccacataaaaaccgtaaattaaattcgaactagcaggccgaataaggcacaccaggaactcgtggttttattcattatgaagtggtttttacctgttctcttagcc               <  1:848671‑M1/140‑127 (MQ=255)

                                                                                                                       gCAGGGGACACCATccttgtgtttatccctaaaaccacataaaaaccgtaaattaaattcgaactagcaggccgaataaggcacaccaggaactcgtggttttattcattatgaagtggtttttacctgttctcttagcc               <  1:850668‑M1/140‑127 (MQ=255)

                                                                                                                       gCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGt               >  2:555237/1‑140 (MQ=255)

                                                                                                                          ggggACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGa            <  1:533808/140‑1 (MQ=255)

                                                                                                                          ggggACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGa            >  2:248615/1‑140 (MQ=255)

                                                                                                                             gACACCATccttgtgtttatccctaaaaccacataaaaaccgtaaattaaattcgaactagcaggccgaataaggcacaccaggaactcgtggttttattcattatgaagtggtttttacctgtcctcttagccagataa         >  2:870885‑M1/1‑8 (MQ=255)

                                                                                                                             gACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATaa         <  2:875750/140‑1 (MQ=255)

                                                                                                                             gACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATaa         <  2:876869/140‑1 (MQ=255)

                                                                                                                              acacCATccttgtgtttatccctaaaaccacataaaaaccgtaaattaaattcgaactagcaggccgaataaggcacaccaggaactcgtggttttattcattatgaagtggtttttacctgttctcttagccagataat        >  1:174106‑M1/1‑7 (MQ=255)

                                                                                                                                acCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAaat      >  1:863493/1‑140 (MQ=255)

                                                                                                                                acCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAaat      >  1:680089/1‑140 (MQ=255)

                                                                                                                                  cATccttgtgtttatccctaaaaccacataaaaaccgtaaattaaattcgaactagcaggccgaataaggcacaccaggaactcgtggttttattcattatgaagtggtttttacctgttctcttagccagataataaac    >  2:373118‑M1/1‑3 (MQ=255)

                                                                                                                                    tccttgtgtttatccctaaaaccacataaaaaccgtaaattaaattcgaactagcaggccgaataaggcacaccaggaactcgtggttttattcattatgaagtggtttttacctgttctcttagccagataataaacgc  >  2:569300‑M1/1‑1 (MQ=255)

ATCGAGCGGCAGCGTACTTACCCCGCACTCCATTAGCGGGTATACTCATGCCGCATTGTCCTCTTAGTTAAATGGATATAACGAGCCCCTCCTAAGGGCTAATTGCAGGTTCGATTCCTGCAGGGGACACCATTTATCAGTTCGCTCCCATCCGTACCAGTCCGCAAAATCCCCTGAATATCAAGCATTCCGTAGATTTACAGTTCGTCATGGTTCGCTTCAGATCGTTGACAGCCGCACTCCATGACGGGTAAAAAGTGGATAAAATAATT  >  NC_000913/2466252‑2466523

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 11 ≤` `ATCG/ATCG` `< 25 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.