Predicted mutation
evidence seq id position mutation freq annotation gene description
JC JC NC_000913 4,640,551 IS1 (–) +9 bp 100% intergenic (+9/‑383) yjjY → / → yjtD uncharacterized protein/putative methyltransferase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3583428 =NA (NA)40 (0.610) 26/256 NT 97.4% noncoding (1/768 nt) IS1 repeat region
?NC_000913 4640551 = 1 (0.020)intergenic (+9/‑391) yjjY/yjtD uncharacterized protein/putative methyltransferase
* ? NC_000913 = 3584195NA (NA)41 (0.640) 30/254 NT 97.4% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 4640559 1 (0.020)intergenic (+17/‑383) yjjY/yjtD uncharacterized protein/putative methyltransferase

GCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATT  >  NC_000913/3584057‑3584334
                                                                                                                                          |                                                                                                                                           
gCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCg                                                                                                                                            <  2:805404/140‑1 (MQ=11)
gCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCg                                                                                                                                            <  1:221618/140‑1 (MQ=11)
gCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTAACAATAAGTTGGAGTCATTACCg                                                                                                                                            <  2:805361/140‑1 (MQ=11)
           aTCTGAGGCAGCACCTGGCACGGCTGTGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGt                                                                                                                                 >  1:566996/1‑140 (MQ=37)
           aTCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGt                                                                                                                                 >  2:1044450/1‑140 (MQ=37)
           aTCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGt                                                                                                                                 >  1:350488/1‑140 (MQ=37)
           aTCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGt                                                                                                                                 >  2:1045997/1‑140 (MQ=37)
             cTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAATCACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTaa                                                                                                                               >  1:481257/1‑140 (MQ=38)
             cTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTaa                                                                                                                               >  1:55141/1‑140 (MQ=38)
             cTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTaa                                                                                                                               >  1:55024/1‑140 (MQ=38)
                aGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACtt                                                                                                                            >  2:795193/1‑140 (MQ=40)
                aGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACtt                                                                                                                            >  1:26754/1‑140 (MQ=40)
                   cagcaCCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACttttt                                                                                                                         >  1:1026837/1‑140 (MQ=255)
                    agcaCCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACtttttt                                                                                                                        >  1:192320/1‑140 (MQ=255)
                    agcaCCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACtttttt                                                                                                                        >  1:438599/1‑140 (MQ=255)
                     gcaCCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAACCACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACttttttt                                                                                                                       <  2:909735/140‑2 (MQ=255)
                     gcaCCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTg                                                                                                                       <  2:800329/140‑1 (MQ=255)
                      caCCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAATCACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGa                                                                                                                      >  2:1105409/1‑140 (MQ=255)
                      caCCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGa                                                                                                                      >  2:1105420/1‑140 (MQ=255)
                      caCCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGa                                                                                                                      >  1:42275/1‑140 (MQ=255)
                      caCCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCAGGACAAAGTCATCGGGCATTATATGAACAGAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTGGa                                                                                                                      >  2:917815/1‑140 (MQ=255)
                        ccTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGaaa                                                                                                                    <  1:930347/140‑1 (MQ=255)
                          tGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAAtt                                                                                                                  >  1:612016/1‑140 (MQ=255)
                           ggCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTa                                                                                                                 >  2:152496/1‑140 (MQ=255)
                           ggCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTa                                                                                                                 >  2:267586/1‑140 (MQ=255)
                           ggCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTa                                                                                                                 >  1:703158/1‑140 (MQ=255)
                              aCGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTagag                                                                                                              <  2:604591/140‑1 (MQ=255)
                                ggCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGat                                                                                                            <  1:471574/140‑1 (MQ=255)
                                ggCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGat                                                                                                            <  1:853954/140‑1 (MQ=255)
                                 gCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGata                                                                                                           >  1:1125030/1‑140 (MQ=255)
                                  cTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGataa                                                                                                          >  1:471317/1‑140 (MQ=255)
                                          gAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGca                                                                                                  <  1:927245/140‑1 (MQ=255)
                                          gAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGca                                                                                                  <  1:1004794/140‑1 (MQ=255)
                                             gTCTCTGTCGTTCTCATATAGGGTTTAGATGTTTGACAAAGTATTCGGGCATTATCTGAACATAAAACACTATCAATATGTTGGAGTCTTTTCCTACATTTTAAGTTTCTTTTTTGAATTTTGTGTTAATATTGGctctg                                                                                               <  2:603098/140‑5 (MQ=9)
                                             gTCGCTGTCGTTCTCAAACTCCGTGGAGCTGCATGACAAAGTCCTCGGGCTTTATCTGAACAAAACCCACTATCAATAAGTTGGAGTCATTTCCGACATTAAAACTTACTTTTTTGACATTAGAGATAATATTGGCTCAg                                                                                               <  2:603138/140‑1 (MQ=17)
                                             gTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACTCTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAg                                                                                               <  2:21756/140‑1 (MQ=255)
                                             gTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATCAGTTGGTGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAg                                                                                               <  2:20920/140‑1 (MQ=255)
                                             gTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAg                                                                                               <  1:253923/140‑1 (MQ=255)
                                             gTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAg                                                                                               <  1:1106153/140‑1 (MQ=255)
                                             gTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAg                                                                                               <  2:254619/140‑1 (MQ=255)
                                             gTCGCTGTCGTACTCAAAATCGGCGGAGCTGCAAGACAAAGTACTCGGGCATTATCAGAACATAAACCACTATCAATAACTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAg                                                                                               <  2:4726/140‑1 (MQ=18)
                                               cGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGaa                                                                                             >  2:301258/1‑140 (MQ=255)
                                                gCTGTCGTTCTCAAAATCGGTGGAGCTGCATGTCAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAATGTAACTTTTTTGTAATGAGTGATAATATTGGCACAGaaa                                                                                            >  1:467591/1‑140 (MQ=18)
                                                 cTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGaaaa                                                                                           >  1:179487/1‑140 (MQ=255)
                                                     cGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAAAATTGGCACAGAAAatata                                                                                       >  2:783158/1‑140 (MQ=255)
                                                      gTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACCCTATCCATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAatatat                                                                                      <  2:54603/140‑1 (MQ=255)
                                                       ttCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATAtt                                                                                     >  1:802650/1‑140 (MQ=255)
                                                         ctcAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCa                                                                                   <  2:585952/140‑1 (MQ=255)
                                                           cAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAACACACTATCAATAAGTTGGAGTCATTACCGACATTAACAGTACCTTTTTTGACATTAGAGATAATCTTGGCACAGAAAATATATTCAGt                                                                                 <  1:1144745/140‑1 (MQ=21)
                                                           cAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGt                                                                                 <  1:412211/140‑1 (MQ=255)
                                                           cAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGt                                                                                 <  1:542474/140‑1 (MQ=255)
                                                                         cTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGAttt                                                                   <  2:855732/140‑1 (MQ=255)
                                                                          tGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTtc                                                                  >  2:896604/1‑140 (MQ=255)
                                                                            cATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTtctc                                                                >  1:304025/1‑140 (MQ=255)
                                                                                 cAAAGTCATCGGGCATTATCTGAACATAAAACACTATCATTAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGTAAATATATTCAGTTCGTTTAGTGATTTCTCTTctt                                                           >  1:583526/1‑138 (MQ=255)
                                                                                      tCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTa                                                      >  2:818368/1‑140 (MQ=255)
                                                                                        aTCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTaaa                                                    <  2:566996/140‑1 (MQ=255)
                                                                                          cGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACg                                                  <  2:304899/140‑1 (MQ=255)
                                                                                          cGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACg                                                  <  1:497172/140‑1 (MQ=255)
                                                                                               aTTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATc                                             <  2:2197/140‑1 (MQ=255)
                                                                                                    cTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGa                                        <  2:1068709/140‑1 (MQ=255)
                                                                                                    cTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGa                                        <  2:703158/140‑1 (MQ=255)
                                                                                                       aaCATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACat                                     >  2:1112067/1‑139 (MQ=255)
                                                                                                           tAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAgttgt                                 >  1:1005048/1‑140 (MQ=255)
                                                                                                            aaaaCACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAgttgtt                                >  2:851384/1‑140 (MQ=255)
                                                                                                             aaaCACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTc                               >  2:317377/1‑140 (MQ=255)
                                                                                                                 acTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGTACAGTTGTTCataa                           >  1:1212572/1‑140 (MQ=255)
                                                                                                                   tATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCataata                         >  2:835226/1‑140 (MQ=255)
                                                                                                                     tCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATaataat                       <  2:1008458/140‑1 (MQ=255)
                                                                                                                     tCAATAAGTTGGAGTCATTACCGACATTAAAAGTAAATTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATaataat                       <  1:1215805/140‑1 (MQ=255)
                                                                                                                             ttGGAGTCATGACCGACATTAAAAGTAACTTTTTTGAAATTAGATATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCAATCTTAAACGAAATCATGGACAGTTGTTCATAATAAACAAAAGGa               >  2:767500/1‑140 (MQ=255)
                                                                                                                             ttGGAGACATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTTATTTCTATTCATTCTAAAACTAAATCATGGACAGTTGTTCATAATAATCAAAAGGa               >  2:767380/1‑140 (MQ=255)
                                                                                                                               ggAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGaaa             >  1:1004218/1‑140 (MQ=255)
                                                                                                                               ggAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGaaa             >  1:235491/1‑140 (MQ=255)
                                                                                                                               ggAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGaaa             >  1:235683/1‑140 (MQ=255)
                                                                                                                               ggAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGaaa             >  2:333176/1‑140 (MQ=255)
                                                                                                                               ggAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGaaa             >  2:556317/1‑140 (MQ=255)
                                                                                                                               ggAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGaaa             >  2:836289/1‑140 (MQ=255)
                                                                                                                               ggAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGaaa             >  2:479673/1‑140 (MQ=255)
                                                                                                                               ggAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCAATCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGaaa             >  2:371117/1‑140 (MQ=255)
                                                                                                                               ggAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTAAGTTATTAAACTAAATAATTAAACGAAAAATTGAACAGTTGTAAAAAAAAAACAAAAGTaaa             >  2:582132/1‑140 (MQ=255)
                                                                                                                                 aGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAATATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGTAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACa           <  2:1130871/140‑1 (MQ=255)
                                                                                                                                 aGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCACAAGGAAACa           >  1:1214152/1‑140 (MQ=255)
                                                                                                                                 aGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACa           >  1:311698/1‑140 (MQ=255)
                                                                                                                                 aGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACa           >  1:311822/1‑140 (MQ=255)
                                                                                                                                      ttACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAAt      <  2:542419/140‑1 (MQ=255)
                                                                                                                                      ttACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTACTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATGATCAAAAGGAAACAAAAAt      >  1:1223884/1‑140 (MQ=255)
                                                                                                                                          cGACATTTAAAGTAACTTTTTTGAATTTAGAGATAATATTGGAACAGAAAATATTTTATGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCAtt  <  2:563794/140‑1 (MQ=255)
                                                                                                                                          cGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCAtt  <  2:563039/140‑1 (MQ=255)
                                                                                                                                          cGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCAtt  <  2:325326/140‑1 (MQ=255)
                                                                                                                                          |                                                                                                                                           
GCATAACCTGAATCTGAGGCAGCACCTGGCACGGCTGGGACGGAAGTCGCTGTCGTTCTCAAAATCGGTGGAGCTGCATGACAAAGTCATCGGGCATTATCTGAACATAAAACACTATCAATAAGTTGGAGTCATTACCGACATTAAAAGTAACTTTTTTGAAATTAGAGATAATATTGGCACAGAAAATATATTCAGTTCGTTTAGTGATTTCTCTTCATTCTTAAACGAAATCATGGACAGTTGTTCATAATAATCAAAAGGAAACAAAAATCATT  >  NC_000913/3584057‑3584334

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.