| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,957,432 | G→T | 5.1% | A130E (GCA→GAA) | ilvY ← | transcriptional activator of ilvC; autorepressor |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,957,432 | 0 | G | T | 5.1% | 430.7 / 6.6 | 117 | A130E (GCA→GAA) | ilvY | transcriptional activator of ilvC; autorepressor |
| Reads supporting (aligned to +/- strand): ref base G (48/63); new base T (3/3); total (51/66) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.56e-01 | |||||||||||
Only 100 of 119 total aligned reads displayed.
CGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAGCAGAAGATATGTAATTCGCCAGAGAGCGACGGCCCTTGCTG > NC_000913/3957293‑3957571 | cGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTg > 2:172115/1‑140 (MQ=255) ggcagggcagCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGcc > 1:305546/1‑140 (MQ=255) cagggcagCGCGGGGGCAATCAGCCCTACTGCCAGATTCTCCAGCATCGAATACGCCTCTGCGCCGGGCAAGGTTTCAGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGGGTCCACCTTTTCCATCGCATCTGCCGc < 1:1095658/140‑1 (MQ=255) cagggcagCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGc < 2:853976/140‑1 (MQ=255) ctgcgcGGGGGCAATCGGCACTACTGCCAGATTCTCCAGCATCGATAACTCCACTGCGCCGGGCAAGGATTCCTGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTGTCCATCTCATCTGCCGCATCAc < 2:171447/138‑1 (MQ=255) cagCTCGGGGGCAATCTGCACTACTTCCTGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCATTCGCAAGTTCCGCTTCAACAGTGTCCACCTTTTCCATCGCATCTGCCGCATCAc < 2:294362/140‑1 (MQ=255) cagCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCAc < 1:172115/140‑1 (MQ=255) cagCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCAc < 2:143422/140‑1 (MQ=255) cagCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCAc < 2:1168828/140‑1 (MQ=255) cagCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCAc < 2:613301/140‑1 (MQ=255) cagCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCAc < 2:613310/140‑1 (MQ=255) cgcgGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCag > 1:156726/1‑140 (MQ=255) cgcgGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCag > 1:831953/1‑140 (MQ=255) gggggCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCagtag < 1:474283/140‑1 (MQ=255) ggggCTATGAGCACTACTGGCATAGTCTCCAGCATCTACAACGCCACTGAGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCagtagt < 2:518712/140‑1 (MQ=255) ggggCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCTCCTTTTCCATCGCATCTGCCGCATCACCagtagt < 2:797254/140‑1 (MQ=255) ggggCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCagtagt < 1:185929/140‑1 (MQ=255) ggggCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCagtagt < 2:561401/140‑1 (MQ=255) gggCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTTACCACCTTTTCCATCGCATCTTCCGCATCAc > 1:207993/1‑132 (MQ=255) gggCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTTACCACCTTTTCCATCGCATCTTCCGCATCAc > 1:208668/1‑132 (MQ=255) gggCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTTACCACCTTTTCCATCGCATCTTCCGCATCAc > 1:207815/1‑132 (MQ=255) gggCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTTACCACCTTTTCCATCGCATCTTCCGCATCAc < 2:207815/132‑1 (MQ=255) gggCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTTACCACCTTTTCCATCGCATCTTCCGCATCAc < 2:207993/132‑1 (MQ=255) gggCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTTACCACCTTTTCCATCGCATCTTCCGCATCAc < 2:208668/132‑1 (MQ=255) gggCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAgtagta > 2:797475/1‑140 (MQ=255) gggCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAgtagta > 2:920165/1‑140 (MQ=255) gggCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAgtagta > 1:668018/1‑140 (MQ=255) ctGCCAGATTCTCAAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCAcc < 2:500705/140‑1 (MQ=255) ctGCCAGATACACCAGCATCGAAAACGCCACAGCGCCGGGCAAGGATTCCGGTTTACCCGCAATCGCCCGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCAcc < 2:962750/140‑1 (MQ=255) cggCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCAcc < 2:801365/138‑1 (MQ=255) tGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCg > 2:804395/1‑140 (MQ=255) tGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCg > 2:804355/1‑140 (MQ=255) gCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGa < 2:156726/140‑1 (MQ=255) cctgaatctcCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGGAGTTAGGTTAATCACCACCGAc > 2:1122713/7‑140 (MQ=255) ccAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCTAGGTTTCCGGTTTACCCGCAATCGCCAGTTCCGCTTCTCCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAAGCTCCACAGAc > 2:1122739/1‑140 (MQ=255) ccAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGAc > 1:232332/1‑140 (MQ=255) aGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACgg > 1:517803/1‑140 (MQ=255) aGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGAACCGCTTCACCAGTGACCACCATTTCCATCGCATCTGCCGCCTCACCAGTAGTAAGGTTAATCTCCACCGACgg > 2:91381/1‑140 (MQ=255) ttCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACAAGTAGTAAGTTTAATCTCCACCGACGGgtg > 2:133430/1‑140 (MQ=255) ttCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGCTTTACCCGCAATCGCCAGATCAGCTTCACCAGTGACCACCGTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGgtg > 2:584033/1‑140 (MQ=255) ctcCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTACTCTCCACCGACGGGTGtt < 1:950083/140‑1 (MQ=255) ctcCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGtt < 1:452591/140‑1 (MQ=255) cAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCcg > 1:1186305/1‑140 (MQ=255) cAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCcg > 1:156390/1‑140 (MQ=255) cATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCcgcgc > 1:848458/1‑140 (MQ=255) cATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCcgcgc > 1:847650/1‑140 (MQ=255) aaaaCGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTCAGTTTAAACTCCACCGACGGGTGTTCCGCGCGGAAg < 1:407687/140‑1 (MQ=255) aaaaCGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAg > 1:988966/1‑140 (MQ=255) aaaaCGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAg < 1:378155/140‑1 (MQ=255) aaaaCGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAg < 1:37562/140‑1 (MQ=255) aaaaCGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAg > 1:66235/1‑140 (MQ=255) aaaaCGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAg < 2:320114/140‑1 (MQ=255) aaaaCGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAg < 2:32702/140‑1 (MQ=255) aaaaCGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAg > 1:66236/1‑140 (MQ=255) aaaaCGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAg > 1:66359/1‑140 (MQ=255) aaaaCGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGAAGTAAGTTTAATCTCCACCGACGGGTGTTACGCGCGGAAg > 1:664147/1‑140 (MQ=255) tGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGaa > 1:575342/1‑140 (MQ=255) tGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGaa > 1:459557/1‑140 (MQ=255) ccGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATcgg < 2:213131/140‑1 (MQ=255) aGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGa < 2:868143/140‑1 (MQ=255) aGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGa < 2:868121/140‑1 (MQ=255) aGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGa < 2:867906/140‑1 (MQ=255) ggTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGAt > 2:955497/1‑140 (MQ=255) gTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATg < 2:517803/140‑1 (MQ=255) tCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCt < 1:1020007/140‑1 (MQ=255) ccGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTg > 1:354250/1‑140 (MQ=255) ccGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTg > 1:194640/1‑140 (MQ=255) aCCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAg > 2:1136182/1‑140 (MQ=255) aCCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAg > 1:606693/1‑140 (MQ=255) aTCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCAc > 1:891345/1‑140 (MQ=255) ccAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAg < 2:515061/140‑1 (MQ=255) ccAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAg < 2:805315/140‑1 (MQ=255) ccAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAg < 1:911437/140‑1 (MQ=255) ccAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGGAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAg < 2:805564/140‑1 (MQ=255) aTCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAGCaga < 1:607991/140‑1 (MQ=255) ccGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAGCagaag < 1:1030131/140‑1 (MQ=255) ccGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAGCagaag < 2:369597/140‑1 (MQ=255) ccGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAGCagaag < 2:369371/140‑1 (MQ=255) cTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAGCAGAAGata > 2:754643/1‑140 (MQ=255) ccAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAGCAGAAGATATGTaa < 2:152390/140‑1 (MQ=255) ccAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGGAGGAAGTTGAATCTCCACCGACGGGGGTGCCGCGCGGAAGCGATCCAGACTCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAGCAGAAGATATGTaa > 1:531253/1‑140 (MQ=255) tGACCACCTTTTCCATCGCATCTGCCGCATCACCagtagt > 2:453840/1‑40 (MQ=255) tGACCACCTTTTCCATCGCATCTGCCGCATCACCagtagt < 1:453840/40‑1 (MQ=255) gACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGTGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAGCAGAAGATATGTAATTCGc < 1:488085/140‑1 (MQ=255) accaccTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAGCAGAAGATATGTAATTCGcc > 1:192407/1‑140 (MQ=255) ccTTTTCCATCGCATCTGCCGCATCACCAGTAGTATGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAGCAGAAGATATGTAATTCGCCagag < 2:1013464/140‑1 (MQ=255) ccTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAGCAGAAGATATGTAATTCGCCagag < 1:157029/140‑1 (MQ=255) ccTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAGCAGAAGATATGTAATTCGCCagag < 2:1058319/140‑1 (MQ=255) ttCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAGCAGAAGATATGTAATTCGCCAGAGAGCg < 1:111697/140‑1 (MQ=255) ttCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAGCAGAAGATATGTAATTCGCCAGAGAGCg > 1:1153024/1‑140 (MQ=255) tCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAGCAGAAGATATGTAATTCGCCAGAGAGCGa < 1:955497/140‑1 (MQ=255) cATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAGCAGAAGATATGTAATTCGCCAGAGAGCGACg < 1:754643/140‑1 (MQ=255) aTCGCATCTGCCGCATCACCAGAAGTAAGTTAAATCTCCACCGACTGGTGTTACGCGCTGAAGCGATCCAGAATCGGCGGCATATGGCTGTAGGCAGCGGTCACCGAGCACAAGATATGTAATTAGCCTGAGAGCGACgg < 2:947662/140‑1 (MQ=255) gCATCTGCCGCATCACCCGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAGCAGAAGATAGGTAATTCGCCAGAGTGCGACGGccc > 2:219437/1‑140 (MQ=255) gCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAGCAGAAGATATGTAATTCGCCAGAGAGCGACGGccc > 2:680725/1‑140 (MQ=255) tCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAGCAGAAGATATGTAATTCGCCAGAGAGCGACGGCCCTTg < 2:220382/140‑1 (MQ=255) tCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAGCAGAAGATATGTAATTCGCCAGAGAGCGACGGCCCTTg < 2:587730/140‑1 (MQ=255) tCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAGCAGAAGATATGTAATTCGCCAGAGAGCGACGGCCCTTg < 2:781907/140‑1 (MQ=255) cTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAGCAGAAGATATGTAATTCGCCAGAGAGCGACGGCCCTTGc > 2:849787/1‑140 (MQ=255) gCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAGCAGAAGATATGTAATTCGCCAGAGAGCGACGGCCCTTGCTg < 2:712813/140‑1 (MQ=255) | CGGGCAGGGCAGCGCGGGGGCAATCAGCACTACTGCCAGATTCTCCAGCATCGAAAACGCCACTGCGCCGGGCAAGGTTTCCGGTTTACCCGCAATCGCCAGATCCGCTTCACCAGTGACCACCTTTTCCATCGCATCTGCCGCATCACCAGTAGTAAGTTTAATCTCCACCGACGGGTGTTCCGCGCGGAAGCGATCCAGAATCGGCGGCAGATGGCTGTAGGCAGCGGTCACCGAGCAGAAGATATGTAATTCGCCAGAGAGCGACGGCCCTTGCTG > NC_000913/3957293‑3957571 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |