Predicted mutation
evidence seq id position mutation freq annotation gene description
RA NC_000913 3,449,344 A→G 5.3% A180A (GCT→GCC rpsC ← 30S ribosomal subunit protein S3

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009133,449,3440AG 5.3% 245.5 / 4.3 75A180A (GCT→GCCrpsC30S ribosomal subunit protein S3
Reads supporting (aligned to +/- strand):  ref base A (28/43);  new base G (2/2);  total (30/45)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.08e-01

GGCTGAGCAGCCGGTTTTTCCGGTTGTTCAACAGCAGCCATACCACCCAGGATCTCGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAGCGCCCAGACGCATTGCGTTCTGTACAGCACGCTTCA  >  NC_000913/3449213‑3449483
                                                                                                                                   |                                                                                                                                           
ggCTGAGCAGCCGGTTTTTCCGGTTGTTCAACAGCAGCCATACCACCCAGGATCTCGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCag                                                                                                                                     >  2:1019928/1‑140 (MQ=255)
 gCTGAGCAGCCGGTTTTTCCGGTTGTTCAACAGCAGCCATACCACCCAGGATCTCGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCaga                                                                                                                                    <  2:368207/140‑1 (MQ=255)
 gCTGAGCAGCCGGTTTTTCCGGTTGTTCAACAGCAGCCATACCACCCAGGATCTCGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCaga                                                                                                                                    <  2:368405/140‑1 (MQ=255)
   tGAGCAGCCGGTTTTTCCGGTTGTTCAACAGCAGCCATACCACCCAGGATCTCGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAgt                                                                                                                                  >  2:1035537/1‑140 (MQ=255)
     agcagcCGGTTTTTCCGGTTGTTCAACAGCAGCCATACCACCCAGGATCTCGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGAAGTCAGCACGCAGAgtgt                                                                                                                                >  1:1209275/1‑140 (MQ=255)
                    cGGTTGTTCAACAGCAGCCATACCACCCAGGATCTCGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGAc                                                                                                                 <  2:1110793/140‑1 (MQ=255)
                    cGGTTGTTCAACAGCAGCCATACCACCCAGGATCTCGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGAc                                                                                                                 <  2:517813/140‑1 (MQ=255)
                        tgttCAACAGCAGCCATACCACCCAGGATCTCGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCGGCACGCAGAGTGTGCAGCGGTACGCGACCTTc                                                                                                             >  2:712578/1‑140 (MQ=255)
                        tgttCAACAGCAGCCATACCACCCAGGATCTCGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCGGCACGCAGAGTGTGCAGCGGTACGCGACCTTc                                                                                                             >  2:710496/1‑140 (MQ=255)
                        tgttCAACAGCAGCCATACCACCCAGGATCTCGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTc                                                                                                             >  2:1133996/1‑140 (MQ=255)
                         gttCAACAGCAGCCATACCACCCAGGATCTCGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTcg                                                                                                            <  1:896567/140‑1 (MQ=255)
                         gttCAACAGCAGCCATACCACCCAGGATCTCGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTcg                                                                                                            <  1:604654/140‑1 (MQ=255)
                         gttCAACAGCAGCCATACCACCCAGGATCTCGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTcg                                                                                                            <  1:506646/140‑1 (MQ=255)
                              aCAGCAGCCATACCACCCAGGATCTCGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTa                                                                                                       <  1:943021/140‑1 (MQ=255)
                               cagcagCCATACCACCCAGGATCTCGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTAc                                                                                                      <  1:273776/140‑1 (MQ=255)
                               cagcagCCATACCACCCAGGATCTCGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTAc                                                                                                      <  1:10542/140‑1 (MQ=255)
                                  cagcCATACCACCCAGGATCTCGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCAt                                                                                                   >  2:250810/1‑140 (MQ=255)
                                  caccaaTACCACCCAGGATCTATAAATTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCAt                                                                                                   >  2:230392/6‑140 (MQ=255)
                                   agcCATACCACCCAGGATCTCGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCAtt                                                                                                  <  2:886278/140‑1 (MQ=255)
                                   agcCATACCACCCAGGATCTCGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCAtt                                                                                                  <  2:886155/140‑1 (MQ=255)
                                                 ggATCTCGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGAtt                                                                                    >  1:657022/1‑140 (MQ=255)
                                                     ctcGCCTTTGAAGATCCACACTTTCACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCcg                                                                                <  2:1171499/140‑1 (MQ=255)
                                                     ctcGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGTGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCcg                                                                                <  2:349082/140‑1 (MQ=255)
                                                     ctcGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCcg                                                                                <  2:910233/140‑1 (MQ=255)
                                                       cGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCcgcg                                                                              <  2:586954/140‑1 (MQ=255)
                                                       cGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCcgcg                                                                              <  1:831102/140‑1 (MQ=255)
                                                       cGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCcgcg                                                                              >  1:610245/1‑140 (MQ=255)
                                                       cGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCcgcg                                                                              >  1:1231317/1‑140 (MQ=255)
                                                       cGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCcgcg                                                                              <  2:600473/140‑1 (MQ=255)
                                                            ttGAAGATCCACACTTTAACGCCGTTTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCgccgcc                                                                         <  2:1078664/140‑1 (MQ=255)
                                                            ttGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCgccgcc                                                                         <  2:815039/140‑1 (MQ=255)
                                                            ttGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCgccgcc                                                                         <  2:1078595/140‑1 (MQ=255)
                                                                        acTTTAACGCCGATTACACCGTACGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCt                                                             <  2:446257/140‑1 (MQ=255)
                                                                        acTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCt                                                             <  2:317401/140‑1 (MQ=255)
                                                                            tAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACt                                                         >  2:571066/1‑140 (MQ=255)
                                                                            tAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACt                                                         <  2:1112094/140‑1 (MQ=255)
                                                                             aaCGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACtt                                                        >  2:946432/1‑140 (MQ=255)
                                                                              aCGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTc                                                       <  2:88673/140‑1 (MQ=255)
                                                                              aCGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTc                                                       <  2:88662/140‑1 (MQ=255)
                                                                              aCGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATACGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTc                                                       <  2:155609/140‑1 (MQ=255)
                                                                                    aTTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACttt                                                 >  2:278775/1‑140 (MQ=255)
                                                                                    aTTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACttt                                                 >  2:278726/1‑140 (MQ=255)
                                                                                    aTTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACttt                                                 >  2:194689/1‑140 (MQ=255)
                                                                                    aTTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACttt                                                 >  2:194483/1‑140 (MQ=255)
                                                                                            gTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCtt                                         >  2:610519/1‑140 (MQ=255)
                                                                                            gTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGGACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACATCAACAATAATAccag                                         >  2:1204046/1‑138 (MQ=255)
                                                                                             tAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCttt                                        >  2:358371/1‑140 (MQ=255)
                                                                                              aaGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTa                                       <  1:358371/140‑1 (MQ=255)
                                                                                               aGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAg                                      >  1:524277/1‑140 (MQ=255)
                                                                                                   gtgtGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAGCGcc                                  <  1:1143196/140‑1 (MQ=255)
                                                                                                   gtgtGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAGCGcc                                  <  1:248752/140‑1 (MQ=255)
                                                                                                       gcgcTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAGCGCCCAGa                              >  1:303704/1‑140 (MQ=255)
                                                                                                             cAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTATTACCTTTAGCGCCCAGACGCAtt                        <  2:107313/140‑1 (MQ=255)
                                                                                                             cAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAGCGCCCAGACGCAtt                        <  1:99191/140‑1 (MQ=255)
                                                                                                             cAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAGCGCCCAGACGCAtt                        <  1:768833/140‑1 (MQ=255)
                                                                                                                  gtgtTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGTTACGCGACCTTCGCGGTACCTTTCGGGACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATTCCTTTAGCGCCCAGACGCATTGCGtt                   <  1:690877/140‑1 (MQ=255)
                                                                                                                  gtgtTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAGCGCCCAGACGCATTGCGtt                   <  1:366670/140‑1 (MQ=255)
                                                                                                                  gtgtTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAGCGCCCAGACGCATTGCGtt                   <  1:1065731/140‑1 (MQ=255)
                                                                                                                  gtgtTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAGCGCCCAGACGCATTGCGtt                   <  1:124130/140‑1 (MQ=255)
                                                                                                                     ttgtAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAGCGCCCAGACGCATTGCGTTCTg                >  2:483468/1‑140 (MQ=255)
                                                                                                                     ttgtAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAGCGCCCAGACGCATTGCGTTCTg                >  1:524070/1‑140 (MQ=255)
                                                                                                                     ttgtAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAGCGCCCAGACGCATTGCGTTCTg                >  2:1043814/1‑140 (MQ=255)
                                                                                                                       gtAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAGCGCCCAGACGCATTGCGTTCTGTa              <  1:923020/140‑1 (MQ=255)
                                                                                                                       gtAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACATGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAGCGCCCAGACGCATTGCGTTCTGTa              <  1:923080/140‑1 (MQ=255)
                                                                                                                            cGATGTCGGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAGCGCCCAGACGCATTGCGTTCTGTACAGCa         <  1:712578/140‑1 (MQ=255)
                                                                                                                            cGATGTCGGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAGCGCCCAGACGCATTGCGTTCTGTACAGCa         <  1:710496/140‑1 (MQ=255)
                                                                                                                            cGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAGCGCCCAGACGCATTGCGTTCTGTACAGCa         <  1:1133996/140‑1 (MQ=255)
                                                                                                                            cGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAGCGCCCAGACGCATTGCGTTCTGTACAGCa         <  1:571066/140‑1 (MQ=255)
                                                                                                                              aTGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAGCGCCCAGACGCATTGCGTTCTGTACAGCACg       <  1:1086228/140‑1 (MQ=255)
                                                                                                                              aTGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAGCGCCCAGACGCATTGCGTTCTGTACAGCACg       <  1:1053358/140‑1 (MQ=255)
                                                                                                                               tGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAGCGCCCAGACGCATTGCGTTCTGTACAGCACGc      >  2:851938/1‑140 (MQ=255)
                                                                                                                               tGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAGCGCCCAGACGCATTGCGTTCTGTACAGCACGc      >  2:851998/1‑140 (MQ=255)
                                                                                                                               tGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAGCGCCCAGACGCATTGCGTTCTGTACAGCACGc      >  1:110329/1‑140 (MQ=255)
                                                                                                                               tGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAGCGCCCAGACGCATTGCGTTCTGTACAGCACGc      >  2:892484/1‑140 (MQ=255)
                                                                                                                                  cAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAGCGCCCAGACGCATTGCGTTCTGTACAGCACGCTTc   >  1:1127520/1‑140 (MQ=255)
                                                                                                                                   aGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAGCGCCCAGACGCATTGCGTTCTGTACAGCACGCTTCa  <  1:800578/140‑1 (MQ=255)
                                                                                                                                   |                                                                                                                                           
GGCTGAGCAGCCGGTTTTTCCGGTTGTTCAACAGCAGCCATACCACCCAGGATCTCGCCTTTGAAGATCCACACTTTAACGCCGATTACACCGTAAGTGGTGTGCGCTTCAGAGGTGTTGTAGTCGATGTCAGCACGCAGAGTGTGCAGCGGTACGCGACCTTCGCGGTACCATTCGGTACGTGCGATTTCCGCGCCGCCCAGACGGCCGCTAACTTCAACTTTAATACCTTTAGCGCCCAGACGCATTGCGTTCTGTACAGCACGCTTCA  >  NC_000913/3449213‑3449483

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: