| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,593,141 | C→A | 5.3% | E99D (GAG→GAT) | livF ← | branched‑chain amino acid ABC transporter ATPase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,593,141 | 0 | C | A | 5.3% | 260.0 / 2.5 | 75 | E99D (GAG→GAT) | livF | branched‑chain amino acid ABC transporter ATPase |
| Reads supporting (aligned to +/- strand): ref base C (49/22); new base A (2/2); total (51/24) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.89e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.34e-01 | |||||||||||
GCTGTTCACCGCCGGACATGGTGCCCGCCCGCTGAATACGGCGCTCATGCAGACGTGGAAACAGCTCATACACCCACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATGTCTTTATCATCAAACACAATTCGCCCGCTGGTGGCACGCGGATCGC > NC_000913/3593008‑3593280 | gctgTTCACCGCCGGACATGGTGCCCGCCCGCTGAATACGGCGCTCATGCAGACGTGGAAACAGCTCATACACCCACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTcc > 2:587258/1‑140 (MQ=255) cgccgGACATGGTGCCCGCCCGCTGAATACGGCGCTCATGCAGACGTGGAAACAGCTCATACACCCACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATc > 2:518120/1‑140 (MQ=255) cATGGTGCCCGCCCGCTGAATACGGCGCTCATGCAGACGTGGAAACAGCTCATACACCCACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCgaga < 2:979293/140‑1 (MQ=255) tGCCCGCCCGCTGAATACGGCGCTCAAGCAGACGTCGAAACAGCTCATACAACCACTTTATGCGCACCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGGTCTCTTCCACCGTCATCCGCGAGAAcacg > 2:1149855/1‑140 (MQ=255) gcccgcccGCTGAATACGGCGCTCATGCAGACGTGGAAACAGCTCATACACCCACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAgacgc > 2:1020809/1‑140 (MQ=255) gcccgcTGAATACGGCGCTCATGCAGACGTGGAAACAGCTCATACACCCACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAgacgcgacg > 1:1197156/1‑140 (MQ=255) cccgcTGAATACGGCGCTCATGCAGACGTGGAAACAGCTCATACACCCACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAgacgcgacgc < 2:116622/140‑1 (MQ=255) cccgcTGAATACGGCGCTCATGCAGACGTGGAAACAGCTCATACACCCACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAgacgcgacgc < 2:1022917/140‑1 (MQ=255) cTGAATACGGCGCTCATGCAGACGTGGAAACAGCTCATACACCCACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCGTCCACCGTCATCCGCGAGAAGACGCGACGCCCtt > 2:459537/1‑140 (MQ=255) ggCGCTCATGCAGACGTGGAAACAGCTCATACACCCACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACa < 2:196507/140‑1 (MQ=255) cgcTCATGCAGACGTGGAAACAGCTCATACACCCACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAAt > 1:893884/1‑140 (MQ=255) cgcTCATGCAGACGTGGAAACAGCTCATACACCCACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAAt < 1:270764/140‑1 (MQ=255) cgcTCATGCAGACGTGGAAACAGCTCATACACCCACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAAt > 1:313622/1‑140 (MQ=255) aTGCAGACGTGGAAACAGCTCATACACCCACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCa > 2:524625/1‑140 (MQ=255) gACGTGGAAACAGCTCATACACCCACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCt > 1:1215246/1‑140 (MQ=255) gTGGAAACAGCTCATACACCCACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTcg > 1:1219765/1‑140 (MQ=255) ggAAACAGCTCATACACCCTCTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTcgcg > 1:258615/1‑140 (MQ=255) gAAACAGCTCATACACCCACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCgcgc > 2:37988/1‑140 (MQ=255) atcAGCTCATACACCCACTTTATGCGCTCCTGGTACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCGTTCCGGGACAATCGCCTCGGCTTCGCGCAt < 2:1175028/138‑1 (MQ=255) cTCATACACCCACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGAttt > 1:934831/1‑140 (MQ=255) cTCATACACCCACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGAttt > 1:590891/1‑140 (MQ=255) cTCATACACCCACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTATCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCt > 1:353432/1‑127 (MQ=255) cTCATACACCCACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTATCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCt > 1:353438/1‑127 (MQ=255) cTCATACACCCACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTATCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCt < 2:353432/127‑1 (MQ=255) cTCATACACCCACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTATCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCt < 2:353438/127‑1 (MQ=255) cccACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTc > 2:198123/1‑140 (MQ=255) cccACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTc > 1:1125756/1‑140 (MQ=255) cccACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTc > 2:623159/1‑140 (MQ=255) cccACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTc > 1:1125739/1‑140 (MQ=255) cccACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTc > 1:438593/1‑140 (MQ=255) cccACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCAACCGCGAGAATACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTc > 2:179552/1‑140 (MQ=255) cccACTTTATGAGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAAGCGCCCATCGCCAGGTTCTATTCCACCGTCATCCGAGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGGATGATTTTCGCTGTc > 2:947348/1‑140 (MQ=255) cACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTg > 2:1165016/1‑140 (MQ=255) cACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGACAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAAACGCCACCGCTTCGCGCATGATTTTCGCTGTCTg > 2:1165212/1‑140 (MQ=255) tttATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCa > 2:1107880/1‑140 (MQ=255) tttATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCa > 2:1107952/1‑140 (MQ=255) atcagcgcTCCTGGAACTGGTCGCGATCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAg < 2:1219765/136‑1 (MQ=255) tATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGt < 1:518120/140‑1 (MQ=255) tGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCg > 1:327548/1‑140 (MQ=255) gcTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTa < 2:538593/140‑1 (MQ=255) gcTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTa < 1:1084764/140‑1 (MQ=255) gcTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTa < 1:675887/140‑1 (MQ=255) cTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCGCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTTCCAGTCGGTaa > 2:629581/1‑140 (MQ=255) accTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAAt < 1:599787/139‑1 (MQ=255) ccTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATg > 1:1021806/1‑140 (MQ=255) ccTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATg > 1:253043/1‑140 (MQ=255) ccTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATg > 2:584755/1‑140 (MQ=255) ccTGGAACTGGTCGCGATCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAAtc > 2:584826/1‑139 (MQ=255) ggTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATGTCTTTatca > 2:1105353/1‑140 (MQ=255) ggTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATGTCTTTatca > 1:463852/1‑140 (MQ=255) ggTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATGTCTTTatca > 1:463865/1‑140 (MQ=255) ggTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTGCGCGCATGATTTTCGCGGTCTGCCAGTCGGTCATGGCTATatcc > 2:621376/1‑139 (MQ=255) gTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCAACCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATGTCTTTatcat > 1:37985/1‑140 (MQ=255) tCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGTGTTTCGCTGTCTGACAGTCGGTAATGTCTTTatcatc > 1:1228007/1‑140 (MQ=255) tCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATGTCTTTatcatc > 2:450355/1‑140 (MQ=255) cgTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCAGCCAGTCGGTAATGTCTTTATCATCaaa < 1:474284/140‑1 (MQ=255) ttCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATGTCTTTATCATCAAaca > 1:1079463/1‑140 (MQ=255) gCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATGTCTTTATCATCAAACACAAt > 2:108887/1‑140 (MQ=255) gCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATGTCTTTATCATCAAACACAAt > 2:242067/1‑140 (MQ=255) gCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATGTCTTTATCATCAAACACAAt > 2:108909/1‑140 (MQ=255) gCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATGTCTTTATCATCAAACACAAt > 2:108942/1‑140 (MQ=255) gCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATGTCTTTATCATCAAACACAAt > 2:195362/1‑140 (MQ=255) gCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATGTCTTTATCATCAAACACAAt > 1:174846/1‑140 (MQ=255) aaaacaaCCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGTAGACGCGACGCCCTTCAGTGTCAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTAGGTAATGTCTTTATCATCAAACACAATTc < 2:689877/140‑1 (MQ=255) aaaaCCGCCCATCGCAAGGTTCTCTTCCACCGACATCCGCGAGAATACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGAATGATTTTCGCTGTCTGCCAGTCGGTAATGTATTTATAATCAAACACAATTCGcc > 2:541824/1‑140 (MQ=255) aCCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATGTCTTTATCATCAAACACAATTCGCCCGc < 1:266134/140‑1 (MQ=255) aCCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATGTCTTTATCATCAAACACAATTCGCCCGc < 1:264873/140‑1 (MQ=255) gCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATGTCTTTATCATCAAACACAATTCGCCCGCTGGTGGCAcg < 1:587258/140‑1 (MQ=255) gTTCTCTTCCACCGTCATCCGCGAGAATACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATGTCTTTATCATCAAACACAATTCGCCCGCTGGTGGCACGCGGAt > 2:606509/1‑140 (MQ=255) gTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATGTCTTTATCATCAAACACAATTCGCCCGCTGGTGGCACGCGGAt > 2:1119861/1‑140 (MQ=255) gTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATGTCTTTATCATCAAACACAATTCGCCCGCTGGTGGCACGCGGAt < 2:845379/140‑1 (MQ=255) gTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATGTCTTTATCATCAAACACAATTCGCCCGCTGGTGGCACGCGGAt < 2:845338/140‑1 (MQ=255) gTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATGTCTTTATCATCAAACACAATTCGCCCGCTGGTGGCACGCGGAt < 2:1113898/140‑1 (MQ=255) gTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATGTCTTTATCATCAAACACAATTCGCCCGCTGGTGGCACGCGGAt < 2:341572/140‑1 (MQ=255) gTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATGTCTTTATCATCAAACACAATTCGCCCGCTGGTGGCACGCGGAt < 1:857495/140‑1 (MQ=255) tctcTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATGTCTTTATCATCAAACACAATTCGCCCGCTGGTGGCACGCGGATcg < 1:161215/140‑1 (MQ=255) tctcTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATGTCTTTATCATCAAACACAATTCGCCCGCTGGTGGCACGCGGATcg < 1:161307/140‑1 (MQ=255) ctctTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATGTCTTTATCATCAAACACAATTCGCCCGCTGGTGGCACGCGGATcgc > 2:172018/1‑140 (MQ=255) | GCTGTTCACCGCCGGACATGGTGCCCGCCCGCTGAATACGGCGCTCATGCAGACGTGGAAACAGCTCATACACCCACTTTATGCGCTCCTGGAACTGGTCGCGTTCAGCAAAAAAACCGCCCATCGCCAGGTTCTCTTCCACCGTCATCCGCGAGAAGACGCGACGCCCTTCCGGGACAATCGCCACCGCTTCGCGCATGATTTTCGCTGTCTGCCAGTCGGTAATGTCTTTATCATCAAACACAATTCGCCCGCTGGTGGCACGCGGATCGC > NC_000913/3593008‑3593280 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |