Predicted mutation
evidence seq id position mutation annotation gene description
JC JC NC_000913 4,640,551 IS1 (–) +9 bp intergenic (+9/‑383) yjjY → / → yjtD uncharacterized protein/putative methyltransferase

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 3583428 =NA (NA)98 (1.120) 52/276 0.1 97.9% noncoding (1/768 nt) IS1 repeat region
?NC_000913 4640551 = 2 (0.020)intergenic (+9/‑391) yjjY/yjtD uncharacterized protein/putative methyltransferase
* ? NC_000913 = 3584195NA (NA)109 (1.250) 50/274 0.1 98.1% noncoding (768/768 nt) IS1 repeat region
?NC_000913 = 4640559 2 (0.020)intergenic (+17/‑383) yjjY/yjtD uncharacterized protein/putative methyltransferase

GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3583564‑3583428
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCA  >  NC_000913/4640551‑4640687
                                                                                                                                                                                                                                                                                  
GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGGGGAACGGGAGGGACTGCTGATGGAAACAGAAGCCCCGGGAGCACCTCAAAATCACCTTCATACACTAAAGCAGTACGTTGGCGGCAGCACCGAG                                                                                                                                        >  1:285504/1‑140
 ATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGG                                                                                                                                       >  1:1405456/1‑140
 ATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGG                                                                                                                                       >  1:1403944/1‑140
      CGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCG                                                                                                                                  >  1:1027557/1‑140
      CGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCG                                                                                                                                  >  2:95329/1‑140
      CGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCG                                                                                                                                  >  2:93178/1‑140
        GCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGA                                                                                                                                <  1:1000027/140‑1
        GCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGA                                                                                                                                <  1:441977/140‑1
         CGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAATCACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGAC                                                                                                                               >  2:930244/1‑140
         CGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGAC                                                                                                                               <  2:198771/140‑1
         CGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGAC                                                                                                                               <  2:198795/140‑1
          GGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACA                                                                                                                              <  1:137704/140‑1
          GGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACA                                                                                                                              <  2:1021128/140‑1
            TGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGTACAGCTGATAGAAACAGAAGCCACTGGACCACCTCAAAAACACCATCATACACTAAAACAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACC                                                                                                                            <  1:98770/140‑1
            TGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACC                                                                                                                            <  2:1287850/140‑1
            TGCTTTTGCCGTTACGCACCACCCCGTCACTAGCTGAACAGGAGGCACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACC                                                                                                                            <  1:299482/140‑1
                 TTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATA                                                                                                                       >  1:988716/1‑140
                 TTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATA                                                                                                                       >  1:988738/1‑140
                 TTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATA                                                                                                                       >  1:1317678/1‑140
                      GTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACT                                                                                                                  >  1:895219/1‑140
                           GCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCT                                                                                                             <  2:123781/140‑1
                           GCACCACCCCGTCAGGAGCTGAACAGGAGGGACAGCTGATAGATACAGAAGCCTCTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGAAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCT                                                                                                             <  2:122801/140‑1
                              CCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCG                                                                                                          <  2:1200013/140‑1
                               CACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGT                                                                                                         >  1:463956/1‑140
                                     GTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACAT                                                                                                   <  2:887063/140‑1
                                     GTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGATGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACAT                                                                                                   >  2:1466369/1‑140
                                        AGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGCAGCCACTGGAGCACCTCTAAAACACCATCATTCACTAAATCAGTTAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATA                                                                                                <  2:228833/140‑1
                                         GTAGCTGAACAGGAGGGACAGCTGATATAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGTCATTTAT                                                                                               >  2:862432/1‑140
                                         GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATAT                                                                                               >  2:1462612/1‑140
                                         GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATAT                                                                                               >  1:287415/1‑140
                                         GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATAT                                                                                               >  1:241347/1‑140
                                         GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATAT                                                                                               >  2:503789/1‑140
                                         GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATAATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATAT                                                                                               >  1:1328774/1‑140
                                         GTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATAATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATAT                                                                                               >  1:1328911/1‑140
                                          TAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATC                                                                                              <  2:199469/140‑1
                                          TAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATC                                                                                              <  2:200094/140‑1
                                           AGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCA                                                                                             >  1:269423/1‑140
                                             CTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAG                                                                                           <  2:1412777/140‑1
                                                AACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTC                                                                                        >  2:1056490/1‑140
                                                        GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAG                                                                                <  2:102512/140‑1
                                                        GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAG                                                                                >  1:106494/1‑140
                                                        GGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAG                                                                                >  1:1383131/1‑140
                                                          ACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAATAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAATACTACGCGTCGTTGACATATATCAAGTTCAATTGTAGCA                                                                              >  1:1276836/1‑140
                                                          ACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCA                                                                              >  1:1413752/1‑140
                                                          ACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCA                                                                              >  1:551131/1‑140
                                                          ACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCAACATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATAAATCAACTTCAATTCTAGCA                                                                              >  2:1541152/1‑140
                                                             GCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTAGTTGACATATATCAAGTTCAATTGTAGCACGT                                                                           <  1:310807/140‑1
                                                               TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTA                                                                         >  1:669299/1‑140
                                                               TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTA                                                                         >  2:190593/1‑140
                                                               TGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTA                                                                         >  2:190259/1‑140
                                                                 ATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAAC                                                                       >  1:1092651/1‑140
                                                                   AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAG                                                                     >  1:725491/1‑140
                                                                   AGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAG                                                                     >  1:1220787/1‑140
                                                                      AACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTAAGCTTCGTTGACATATATCAAGTTCAATTTTATCACGTTAACAGTTT                                                                  >  1:1253116/1‑140
                                                                        CAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGA                                                                >  1:592656/1‑140
                                                                           AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGA                                                             >  1:848615/1‑140
                                                                           AAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGA                                                             >  1:222254/1‑140
                                                                            AGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAA                                                            <  1:1175620/140‑1
                                                                                ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCA                                                        <  2:208221/140‑1
                                                                                ACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCA                                                        <  2:208255/140‑1
                                                                                 CTGGAGCACCACAAAAACACCATCCTACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATACAACTACGCTTCGTTGACATATAACAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCAT                                                       <  2:1051040/140‑1
                                                                                   GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCG                                                     >  2:1375187/1‑140
                                                                                   GGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCG                                                     >  2:1375440/1‑140
                                                                                       CACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATC                                                 >  1:124509/1‑140
                                                                                         CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTA                                               >  1:390196/1‑140
                                                                                         CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTA                                               >  1:347906/1‑140
                                                                                         CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTA                                               >  1:347722/1‑140
                                                                                         CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTA                                               >  1:394526/1‑140
                                                                                         CCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTA                                               >  1:206201/1‑140
                                                                                              AAAACACCATCATACCCTAAATCAGTAAGGTGGCAGCATCACCGCGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTGAACAGTTTGATGAACTCAGCGTATCTAAATGC                                          >  2:1311133/1‑140
                                                                                              AAAACACCATCATACACTCAATCAGGAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACAGATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCAGCGGATCTAAATGC                                          >  2:1309638/1‑140
                                                                                              AAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGC                                          >  1:1294773/1‑140
                                                                                                    CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCTAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGATTGATGAAATCATCGTATCTAAATGCTATCTT                                    >  2:206278/1‑140
                                                                                                    CCATCATACACTAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTT                                    >  2:800536/1‑140
                                                                                                             ACTAAATCAGTAAGTTGGCATCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGTTGAAATCATCGTATCTAAATGCTAGCTTTCGTCACAT                           >  2:1242251/1‑140
                                                                                                               TAAATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAAGTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTACGTCACATTA                         >  2:208299/1‑140
                                                                                                                 tATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAAAAGTTTGATGAATTCATCGTATCTAAATGCTAGCTTTCGTCACATTATT                       >  2:689552/2‑140
                                                                                                                 AATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTTATGAAATCATCTTATCTAATTGCTAGCTTTCGTCTCATTATT                       >  2:1185104/1‑140
                                                                                                                 AATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATT                       >  2:440077/1‑140
                                                                                                                 AATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATT                       >  1:498717/1‑140
                                                                                                                 AATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATT                       >  1:615054/1‑140
                                                                                                                 AATCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATT                       >  2:880223/1‑140
                                                                                                                   TCAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTT                     >  1:936937/1‑140
                                                                                                                    CAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTATCAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTA                    <  2:1020176/140‑1
                                                                                                                    CAGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTA                    <  1:404983/140‑1
                                                                                                                     AGTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAA                   <  1:573856/140‑1
                                                                                                                      GTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAAT                  >  1:148244/1‑140
                                                                                                                      GTAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAAT                  <  2:642738/140‑1
                                                                                                                       TAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATA                 >  2:475422/1‑140
                                                                                                                       TAAGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATA                 >  2:475462/1‑140
                                                                                                                         AGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAAT               >  1:612915/1‑140
                                                                                                                         AGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAAT               >  2:45862/1‑140
                                                                                                                         AGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAAT               <  1:665445/140‑1
                                                                                                                         AGTTGGCAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATAAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAAT               >  1:612440/1‑140
                                                                                                                               CAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACT         >  2:1231021/1‑140
                                                                                                                               CAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACT         >  2:1231113/1‑140
                                                                                                                               CAGCATCACCGAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACT         >  2:588437/1‑140
                                                                                                                                      ACCGAGGGGCCGGACACCCAATAAATCTTCGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCA  <  2:1261452/140‑1
                                                                                                                                                                                                                                                                                  
GATGTCCGGCGGTGCTTTTGCCGTTACGCACCACCCCGTCAGTAGCTGAACAGGAGGGACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/3583564‑3583428
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑GAGGGGCCGGACACCCAATAAAACTACGCTTCGTTGACATATATCAAGTTCAATTGTAGCACGTTAACAGTTTGATGAAATCATCGTATCTAAATGCTAGCTTTCGTCACATTATTTTAATAATCCAACTAGTTGCA  >  NC_000913/4640551‑4640687

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.