Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_000913915,2130AT21.9% 93.9 / 12.4 65intergenic (‑356/+139)ybjE/aqpZputative transporter/aquaporin Z
Reads supporting (aligned to +/- strand):  ref base A (43/7);  new base T (0/14);  total (43/22)
Fisher's exact test for biased strand distribution p-value = 2.43e-09
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

CACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAAT  >  NC_000913/915075‑915352
                                                                                                                                          |                                                                                                                                           
cacaTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAt                                                                                                                                            <  2:517357/140‑1 (MQ=32)
   aTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATggg                                                                                                                                         >  1:184238/1‑140 (MQ=17)
   aTGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTgg                                                                                                                                         >  1:1410238/1‑140 (MQ=32)
    tGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCGGGGGGTGCAGGGGGCGGCGGCGTTTGgc                                                                                                                                        <  1:455449/140‑1 (MQ=17)
        tgtgGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGgccgcc                                                                                                                                    >  1:1146617/1‑140 (MQ=32)
        tgtgGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGgccgcc                                                                                                                                    >  1:1373978/1‑140 (MQ=32)
          tgGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGcccc                                                                                                                                  >  2:1492699/1‑140 (MQ=32)
          tgGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGcccc                                                                                                                                  >  1:1218748/1‑140 (MQ=32)
            ggCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCt                                                                                                                                >  1:1021955/1‑140 (MQ=32)
            ggCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCt                                                                                                                                >  2:855584/1‑140 (MQ=32)
            ggCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCt                                                                                                                                >  2:391496/1‑140 (MQ=32)
            ggCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCt                                                                                                                                >  1:1022193/1‑140 (MQ=32)
                gAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTgcgc                                                                                                                            >  1:852529/1‑140 (MQ=32)
                gAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATGTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTgcgc                                                                                                                            >  1:734634/1‑140 (MQ=17)
                       cgTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCtt                                                                                                                     >  2:1346363/1‑140 (MQ=32)
                       cgTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCtt                                                                                                                     >  1:535835/1‑140 (MQ=32)
                                  gATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGGTCCTTGCGCCAGTGGc                                                                                                          >  1:1117579/1‑140 (MQ=18)
                                  gATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGc                                                                                                          >  1:1372065/1‑140 (MQ=33)
                                  gATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGc                                                                                                          >  1:1372170/1‑140 (MQ=33)
                                  gATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGc                                                                                                          >  1:1371712/1‑140 (MQ=33)
                                   cttttcccTCGCCCCCGACCCGTTCGCCTTTCGTTATCTGTCGTGGGCACGGCGCCGGGGCTTTTTTTTTCGCATGTGCCGGGGGGTGAGGGGGGGGGCGGCTATTGGCCGCCCCATGCGCGCTCCTTGCGCCAGTGGCa                                                                                                         <  2:288957/134‑1 (MQ=2)
                                    tGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCaa                                                                                                        >  1:250099/1‑140 (MQ=35)
                                      ttACATCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAata                                                                                                      >  2:11611/1‑140 (MQ=37)
                                              cgcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGGGCCAGTGGCAATATGTTGCtt                                                                                              >  1:177112/1‑140 (MQ=255)
                                              cgcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTACTTGCGCCAGTGGCAATATGTTGCtt                                                                                              >  1:182960/1‑140 (MQ=255)
                                               gcCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTa                                                                                             >  2:500895/1‑140 (MQ=255)
                                                cccGACCCGGTAGCGTTATGGGATATGTGGTGGGAACGGCGCTGGGGTTTTTTTGTTCGCCAGAGCCGGGGGGTGCTGGGGGCGGCGGCTTTTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAg                                                                                            <  2:637338/140‑1 (MQ=14)
                                                         gTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTTCTTATCTCATGaaa                                                                                   >  1:1166553/1‑140 (MQ=255)
                                                         gTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGaaa                                                                                   >  2:1373295/1‑140 (MQ=255)
                                                         gTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGaaa                                                                                   >  2:607935/1‑140 (MQ=255)
                                                                        aaGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTTGCCGCCCCCATCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATTAAAGGAGCGCAACAAgat                                                                    >  1:872538/1‑140 (MQ=255)
                                                                        aaGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTTCTTAGCTCATGAAAGGAGCGCAACAAgat                                                                    >  1:872679/1‑140 (MQ=255)
                                                                          gtggtgggCACCGCGACGGGGCTTTTTTTTTCGCATGTGCGGGGGTTTGCTGGGGGGGGGGGCTTTTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAgatga                                                                  <  2:1285975/135‑1 (MQ=16)
                                                                          gTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAgatga                                                                  >  1:1478299/1‑140 (MQ=255)
                                                                           tCGTGGGCACCGCGCAGCGGCGATTTTGTACGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAgatgat                                                                 <  2:515995/140‑1 (MQ=255)
                                                                              aGGGCACCGCGCAGCGGCGATTTTGTTCGCCTGAGCCCGGGGGTGCAGGGGGCGGGGGCGATTGGCCGCCCCGTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGTTTAGCTCTTGTAAGGGGCGCAACAAGatgatgta                                                              >  2:1288564/1‑138 (MQ=18)
                                                                              aGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGaa                                                              >  2:685508/1‑140 (MQ=255)
                                                                              aGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGAGTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGaa                                                              >  2:1346862/1‑140 (MQ=255)
                                                                               gggCCCGGCGCTGGGGCTTTTTTTTTGGCCTGCGCGGGGGGGTGGGGGGGGGGGGGGTGTTGGGCCCCCCCCGCCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAt                                                             <  1:1266380/140‑1 (MQ=16)
                                                                               gggCCCGGCGCTGGGGCTTTTTTTTTCGCCTGAGCGGGGGGGTGCTGGGGGGGGGGGCTTTTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAt                                                             <  2:81958/140‑1 (MQ=18)
                                                                               gggCACGGCGCAGGGGCTATTTTGTTCGCCAGAGCCGGGGGGTGCTGGGGGGGGGGGCGATGGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAt                                                             <  2:1085781/140‑1 (MQ=18)
                                                                               gggCACCGCGTTGGGGCGTTTTGGTTGGCCTGTGCCGGGGGGTGCTGGGGGGGGGGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAAt                                                             <  2:775259/140‑1 (MQ=18)
                                                                               gggCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCACCTTGCGCCAGTGGCAATATGTTGCTTATCTCATTAAAGGATCGCAACAAGATGATGAAt                                                             >  1:979053/1‑140 (MQ=255)
                                                                                  cACGGCGCTGGGGCTTTTTTGTTCGCCAGCGCCGGGGGGTGCTGGGGGGGGCGGCTTTGGGCGGCCCCGTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCaa                                                          <  2:1292071/140‑1 (MQ=18)
                                                                                    ccGCGCTGGGGCTTTTTTTTCCGCATGTGCCGGGGGGTGCTGGGGGGGGGGGGTTTTGGCCCCCCCCGCCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACa                                                        <  1:1330070/140‑1 (MQ=255)
                                                                                     cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGGGCCTTGCGCCAGTGGCAATATGTTTCTTTGGTGTTGTATGGTGCGCAACAAGATGTTGTATGGACat                                                       >  1:1009560/1‑140 (MQ=14)
                                                                                     cgcgCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCAAGAAAGGAGCGCAACAAGATGATGAATCAACaa                                                       >  1:54142/1‑139 (MQ=255)
                                                                                       cgcAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTATCTCATGAAAGGAGCGCAACAAGATGATGAATCAACatat                                                     >  2:1349874/1‑140 (MQ=255)
                                                                                            cggcgATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTTCGCCAGTGGCAATATGTTGCTTATCTCATGAAAGGAGCGCAACAAGATTATGAATCAACAAATaacaa                                                >  1:59570/1‑140 (MQ=255)
                                                                                                        tCGCCAGAGCCCGGGGGTGCTGGGGGCGGCGGCTATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTaaaaaa                                    <  2:1362483/140‑1 (MQ=255)
                                                                                                            cAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGc                                >  1:983953/1‑140 (MQ=255)
                                                                                                            cAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCAAGAAAGGAGCGCAACAAGAATATGAATCAACATATAACAACATCTTAAAAAAAGGc                                >  2:1461719/1‑140 (MQ=255)
                                                                                                             tgcgcggggggggGCGGGGGGGGGGGGTTTTGGGCCGCCCCCGGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGcc                               <  2:84748/133‑1 (MQ=37)
                                                                                                             tgcgcgggggggTGGTGGGGGGGGGGGGTTTGGGCCCCCCCCGGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGcc                               <  1:473476/133‑1 (MQ=37)
                                                                                                             agcgcggggggggGCTGGGGGGGGGGGTTTTGGGCCCCCCCCTCCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGcc                               <  1:564421/133‑1 (MQ=37)
                                                                                                             agcgCCGGGGGGTGCTGGGGGCGGGGGCTTTTGGCCCCCCCCGGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATATCAACATCTTAAAAAAAGGcc                               <  2:84788/137‑1 (MQ=37)
                                                                                                             agagCCCGGGGGTGCTGGGGGCGGCGGCGCTTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACACCATCTTAAAAAAAGGcc                               <  2:1417582/140‑1 (MQ=255)
                                                                                                                  gggggggTGTTGGGGGGGGGGGTTTTTGGCCCCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACa                          <  1:1492699/138‑1 (MQ=37)
                                                                                                                  ccGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCACCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACa                          <  2:364748/140‑1 (MQ=255)
                                                                                                                        gTGCTGGGGGGGCCGGTGTTTGCCCGCCCCCTGCGCGCACCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGCTGATGAATCAACATATACCAACATCTTAAAAAAAGGCCTGACATTACGc                    <  2:423132/140‑1 (MQ=255)
                                                                                                                        gTGCCGGGGGCGGGGGGGTTGGGCGCCCCCCGGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGc                    <  2:575545/140‑1 (MQ=38)
                                                                                                                                ggcggcggcGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCtt            >  2:328733/1‑140 (MQ=255)
                                                                                                                                  cggcggcgATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCt          >  2:228291/1‑140 (MQ=255)
                                                                                                                                  cggcggcgATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCt          >  2:444186/1‑140 (MQ=255)
                                                                                                                                   ggcggcgATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTg         >  1:1436880/1‑140 (MQ=255)
                                                                                                                                          aTTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGttaat  >  2:1094699/1‑140 (MQ=255)
                                                                                                                                          |                                                                                                                                           
CACATGGATGTGGGCTGAGGGCGCGTTTTACAGGGATGTTACCTCGCGCCCGACCCGGTAGCCGTAAGGGATAAGTCGAGGGCACCGCGCAGCGGCGATTTTGTTCGCCAGAGCCCGGGGGTGCAGGGGGCGGCGGCGATTGGCCGCCCCCTGCGCGCTCCTTGCGCCAGTGGCAATATGTTGCTTAGCTCATGAAAGGAGCGCAACAAGATGATGAATCAACATATAACAACATCTTAAAAAAAGGCCTGACATTACGCCAGGCCTTCTGCGTTAAT  >  NC_000913/915075‑915352

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: