| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 2464223 | 141 (1.100) | 20 (0.180) | 13/172 | 11.5 | 13.6% | intergenic (+153/+29) | yfdF/mlaA | uncharacterized protein/ABC transporter maintaining OM lipid asymmetry, OM lipoprotein component |
| ? | NC_000913 | = 2464229 | 132 (1.180) | intergenic (+159/+23) | yfdF/mlaA | uncharacterized protein/ABC transporter maintaining OM lipid asymmetry, OM lipoprotein component | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CGGAAATAGTCAGTGACGAACATCAGTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAGGTGAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2464112‑2464223‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaaaggtgagtCGCAAAACTCACCTTTTTTGTTGTTATCCCTCAATTACCACAAGTAAAAGGAGATAAACCGACAATGACCTAGACGTAATTATGTAAAAATACTGATG < NC_000913/2464229‑2464132 CGGAAATAGTCAGTGACGAACATCAGTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACA < 2:2375560/100‑1CGGAAATAGTCAGTGACGAACATCAGTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACA > 1:3201069/1‑100CGGAAATAGTCAGTGACGAACATCAGTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACA > 1:3163435/1‑100CGGAAATAGTCAGTGACGAACATCAGTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACA > 2:846765/1‑100CGGAAATAGTCAGTGACGAACATCAGTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACA > 2:846260/1‑100 GGAAATAGTCAGTGACGAACATCAGTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAA > 2:1074098/1‑100 GGAAATAGTCAGTGACGAACATCAGTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATCGAGGGATAAC‑AACAA > 1:2566342/1‑100 GGAAATAGGCAGTGACGAACATCAGTATTTTTACATAATTACGTCTGGGGCATGGGCGGTTTAGCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAA < 2:2791500/100‑1 GAAATAGTCAGTGACGAACATCAGTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTGATTGAGGGATAAC‑AACAAA < 2:708754/100‑1 GAAATAGTCAGTGACGAACATCAGTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAA > 2:871356/1‑100 ATAGTCAGTGACGAACATCAGTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAA < 2:2016325/100‑1 TAGTCAGTGACGAACATCAGTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAG < 1:717316/100‑1 TAGTCAGTGACGAACATCAGTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAG < 1:716407/100‑1 TAGTCAGTGACGAACATCAGTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAG < 1:1314965/100‑1 AGTCAGTGACGAACATCAGTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAGG < 1:1324401/100‑1 AGTCAGTGACGAACATCAGTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAGG > 2:1693953/1‑100 TCAGTGACGAACATCAGTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAGGTG > 1:3040732/1‑100 TCAGTGACGAACATCAGTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AAAAAAAAAGGTG < 2:1436486/100‑1 CAGTGACGAACATCAGTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAGGTGA > 2:3024663/1‑100 CAGTGACGAACATCAGTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAGGTGA > 2:1172330/1‑100 CAGTGACGAACATCAGTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAGGTGA > 1:1265649/1‑100 CAGTGACGAACATCAGTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAGGTGA > 2:1802539/1‑100 AGTGACGAACATCAGTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAGGTGAG > 1:3190824/1‑100 AGTGACGAACATCAGTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAGGTGAG > 1:3190773/1‑100 GTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AATAAAAAAGGTGAGTCGCAAAACTCACC < 1:1444383/100‑1 ATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAGGTGAGTCGCAAAACTCACCTT < 1:362521/100‑1 TTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAACAAATAAAAAAGGTGAGTCGCAAAACTCACCTT < 2:2399862/100‑1 TTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAACAAATAAAAAAGGTGAGTCGCAAAACTCACCTTT < 1:1527012/100‑1 TTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAGGTGAGTCGCAAAACTCACCTTTTT < 1:1090858/100‑1 TTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAACAAATAAAAAAGGTGAGTCGCAAAACTCACCTTTTT < 2:2585226/100‑1 TACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAGGTGAGTCGCAAAACTCACCTTTTTTG < 2:1518018/100‑1 TACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAGGTGAGTCGCAAAACTCACCTTTTTTG < 1:497327/100‑1 ACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAGGTGAGTCGCAAAACTCACCTTTTTTGn < 2:1841125/100‑2 ACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAGGTGAGTCGCAAAACTCACCTTTTTTGT < 1:683202/100‑1 ACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAGGTGAGTCGCAAAACTCACCTTTTTTGT < 1:524789/100‑1 CATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAGGTGAGTCGCAAAACTCACCTTTTTTGTT < 2:1575843/100‑1 CATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAGGTGAGTCGCAAAACTCACCGTTTTTGTT < 2:2565853/100‑1 ATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAGGTGAGTCGCAAAACTCACCTTTTTTGTTG < 2:523054/100‑1 ATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAGGTGAGTCGCAAAACTCACCTTTTTTGTTG < 1:2544766/100‑1 TACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAGGTGAGTCGCAAAACTCACCTTTTTTGTTGTTATC < 2:1108347/100‑1 ACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAGGTGAGTCGCAAAACTCACCTTTTTTGTTGTTATCC < 1:1456461/100‑1 CGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAGGTGAGTCGCAAAACTCACCTTTTTTGTTGTTATCCC < 2:825207/100‑1 GGTAATTGAGGGATAAC‑AATAAAAAAGGTGAGTCGCAAAACTCACCTTTTTTGTTGTTATCCCTCAATTACCACAAGTAAAAGGAGATAAACCGACAATG < 2:867221/100‑1 GATAAC‑AACAAAAAAGGTGAGTCGCAAAACTCACCTTTTTTGTTGTTATCCCTCAATTACCACAAGTAAAAGGAGATAAACCGACAATGACCTAGACGTA > 1:65664/1‑100 AAAAAGGTGAGTCGCAAAACTCACCTTTTTTGTTGTTATCCCTCAATTACCACAAGTAAAAGGAGATAAACCGACAATGACCTAGACGTAATTATGTAAA < 2:2576866/100‑1 AAAAAGGTGAGTCGCAAAACTCACCTTTTTTGTTGTTATCCCTCAATTACCACAAGTAAAAGGAGATAAACCGACAATGACCTAGACGTAATTATGTAAA > 2:1556564/1‑100 AAAAGGTGAGTCGCAAAACTCACCTTTTTTGTTGTTATCCCTCAATTACCACAAGTAAAAGGAGATAAACCGACAATGACCTAGACGTAATTATGTAAAA > 1:117748/1‑100 AAAGGTGAGTCGCAAAACTCACCTTTTTTGTTGTTATCCCTCAATTACCACAAGTAAAAGGAGATAAACCGACAATGACCTAGACGTAATTATGTAAAAA > 1:179855/1‑100 AAGGTGAGTCGCAAAACTCACCTTTTTTGTTGTTATCCCTCAATTACCACAAGTAAAAGGAGATAAACCGACAATGACCTAGACGTAATTATGTAAAAAT < 2:2162751/100‑1 AAGGTGAGTCGCAAAACTCACCTTTTTTGTTGTTATCCCTCAATTACCACAAGTAAAAGGAGATAAACCGACAATGACCTAGACGTAATTATGTAAAAAT < 2:449981/100‑1 GGTGAGTCGCAAAACTCACCTTTTTTGTTGTTATCCCTCAATTACCACAAGTAAAAGGAGATAAACCGACAATGACCTAGACGTAATTATGTAAAAATAC > 2:1962897/1‑100 GTGAGTCGCAAAACTCACCTTTTTTGTTGTTATCCCTCAATTACCACAAGTAAAAGGAGATAAACCGACAATGACCTAGACGTAATTATGTAAAAATACT < 1:2814126/100‑1 GTGAGTCGCAAAACTCACCTTTTTTGTTGTTATCCCTCAATTACCACAAGTAAAAGGAGATAAACCGACAATGACCTAGACGTAATTATGTAAAAATACT < 1:2514308/100‑1 GAGTCGCAAAACTCACCTTTTTTGTTGTTATCCCTCAATTACCACAAGTAAAAGGAGATAAACCGACAATGACCTAGACGTAATTATGTAAAAATACTGA < 2:2069401/100‑1 GTCGCAAAACTCACCTTTTTTGTTGTTATCCCTCAATTACCACAAGTAAAAGGAGATAAACCGACAATGACCTAGACGTAATTATGTAAAAATACTGATG < 1:403915/100‑1 CGGAAATAGTCAGTGACGAACATCAGTATTTTTACATAATTACGTCTAGGTCATTGTCGGTTTATCTCCTTTTACTTGTGGTAATTGAGGGATAAC‑AACAAAAAAGGTGAGT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/2464112‑2464223‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aaaaaaggtgagtCGCAAAACTCACCTTTTTTGTTGTTATCCCTCAATTACCACAAGTAAAAGGAGATAAACCGACAATGACCTAGACGTAATTATGTAAAAATACTGATG < NC_000913/2464229‑2464132 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |