Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,800,5190TG24.8% 224.9 / 85.1 117intergenic (+44/‑204)ygaM/nrdHputative membrane‑anchored DUF883 family ribosome‑binding protein/hydrogen donor for NrdEF electron transport system; glutaredoxin‑like protein
Reads supporting (aligned to +/- strand):  ref base T (38/50);  new base G (18/11);  total (56/61)
Fisher's exact test for biased strand distribution p-value = 8.96e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.57e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 118 total aligned reads displayed.

CAGCAGCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGCTATATATTGT  >  NC_000913/2800420‑2800616
                                                                                                   |                                                                                                 
cagcagCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAACATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGt                                                                                                   >  2:2719641/1‑100 (MQ=255)
  gcagcTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCt                                                                                                 >  1:2888042/1‑100 (MQ=255)
  gcagcTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGGAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCt                                                                                                 <  2:1733017/100‑1 (MQ=255)
      cTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCgg                                                                                             <  2:31172/100‑1 (MQ=255)
        gCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCgggg                                                                                           <  2:26616/100‑1 (MQ=255)
        gCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCgggg                                                                                           <  1:1192652/100‑1 (MQ=255)
        gCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCgggg                                                                                           <  1:2710283/100‑1 (MQ=255)
        gCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGACAGGCTTCgggg                                                                                           <  1:109168/100‑1 (MQ=255)
        gCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGACAGGCTTCgggg                                                                                           <  1:109200/100‑1 (MQ=255)
         cagtaggtgTTTTTAGCGGCGAGGTGTTAAGCATGGGAAAATCGTAGCAAAAAAAGGATAATAAATACGCGTCTTTGACTCCGAAGACAGGCTTCGGGGt                                                                                          <  2:2200530/98‑1 (MQ=255)
         cGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGACAGGCTTCGGGGt                                                                                          <  1:85653/100‑1 (MQ=255)
         cGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGACAGGCTTCGGGGt                                                                                          <  1:1749082/100‑1 (MQ=255)
         cGGTAGGTATTTTAATCGGAGCACTGTGAAGTATGCACAAAACGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGACAGGCTTCGGGGt                                                                                          <  2:2200601/100‑1 (MQ=255)
          ggtaggtaTTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTAACCCCGAAGACAGGCTTCGGGGtc                                                                                         <  1:772136/100‑2 (MQ=255)
           gtaggtaTTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTAACCCCGAAGACAGGCTTCGGGGtca                                                                                        <  1:716747/100‑3 (MQ=38)
             aggtaTTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCt                                                                                      >  1:2496405/1‑100 (MQ=255)
              ggtaTTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCtt                                                                                     >  2:1043641/1‑100 (MQ=255)
                  tttttATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTg                                                                                 <  1:3193729/100‑1 (MQ=255)
                  tttttATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTg                                                                                 >  2:597733/1‑100 (MQ=255)
                  tttttATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTg                                                                                 <  2:474978/100‑1 (MQ=255)
                  tttttATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTg                                                                                 <  1:1695788/100‑1 (MQ=255)
                   ttttATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGc                                                                                <  1:2326/100‑1 (MQ=255)
                   ttttATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGc                                                                                <  1:2724/100‑1 (MQ=255)
                    tttATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGcc                                                                               <  2:2938848/100‑1 (MQ=255)
                    tttATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGcc                                                                               >  1:3207582/1‑100 (MQ=255)
                      tATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTg                                                                             >  2:137197/1‑100 (MQ=255)
                      tATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGGCGTCGGGGTTTCTGTTTGCCTg                                                                             >  1:334590/1‑100 (MQ=255)
                       aTCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTgg                                                                            <  2:1466247/100‑1 (MQ=255)
                        tCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGt                                                                           >  2:392331/1‑100 (MQ=255)
                         cGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTg                                                                          <  2:1795635/100‑1 (MQ=255)
                         cGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTg                                                                          <  2:1255346/100‑1 (MQ=255)
                         cGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTg                                                                          <  1:2700326/100‑1 (MQ=255)
                         cGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTg                                                                          <  1:2699973/100‑1 (MQ=255)
                          ggCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGa                                                                         >  2:2795304/1‑100 (MQ=255)
                          ggCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGa                                                                         >  2:2795041/1‑100 (MQ=255)
                            cgcACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAAt                                                                       <  1:2615796/100‑1 (MQ=255)
                            cgcACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAAt                                                                       <  1:2616274/100‑1 (MQ=255)
                             gcACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATc                                                                      <  2:2472540/100‑1 (MQ=255)
                             gcACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATc                                                                      <  2:2472803/100‑1 (MQ=255)
                              cACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATca                                                                     <  2:1030996/100‑1 (MQ=255)
                               aCTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATcac                                                                    <  1:1264700/100‑1 (MQ=255)
                                   ttAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACaaaa                                                                <  2:2366595/100‑1 (MQ=255)
                                     aaGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAAt                                                              <  1:2536844/100‑1 (MQ=255)
                                            cgcAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTa                                                       >  1:1333783/1‑100 (MQ=255)
                                            cgcAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCCTTTTGCCTGGTGACTCACAAAAATCCCCCTa                                                       >  2:1933811/1‑100 (MQ=255)
                                                    gTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCa                                               >  2:353708/1‑100 (MQ=255)
                                                     tAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACACAAATCCCCCTACCCCGTCAc                                              >  2:2054290/1‑100 (MQ=255)
                                                         gCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTc                                          >  2:3209929/1‑100 (MQ=255)
                                                          cAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCa                                         >  2:1492665/1‑100 (MQ=255)
                                                           aaaaaTGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCat                                        <  2:2493059/100‑1 (MQ=255)
                                                           aaaaaTGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCat                                        <  1:3013131/100‑1 (MQ=255)
                                                           aaaaaTGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCat                                        <  2:438851/100‑1 (MQ=255)
                                                            aaaaTGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCata                                       >  1:470427/1‑100 (MQ=255)
                                                                 gATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAg                                  <  1:3108495/100‑1 (MQ=255)
                                                                 gATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAg                                  <  2:2356520/100‑1 (MQ=255)
                                                                 gATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAg                                  >  1:1251631/1‑100 (MQ=255)
                                                                   taataaATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAggg                                >  2:1244525/1‑100 (MQ=255)
                                                                     ataaataCGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTa                              >  1:491416/1‑100 (MQ=255)
                                                                      taaataCGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTaa                             >  1:2148738/1‑100 (MQ=255)
                                                                      taaataCGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATAGCCAGGGTaa                             >  1:2973981/1‑100 (MQ=255)
                                                                        aataCGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGGATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAAtt                           <  2:659586/100‑1 (MQ=255)
                                                                        aataCGCGTCTTTGACCCCGAAGCCTGGCTTCGGGGTTTCTTTTTGCCTGAAGAAACAAAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAAtt                           <  2:660456/100‑1 (MQ=255)
                                                                         ataCGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAAttt                          <  1:686575/100‑1 (MQ=255)
                                                                           aCGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGGTTCGTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCAGATCCAGGGTAATTTCg                        <  2:382427/100‑1 (MQ=255)
                                                                            cgcgTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGa                       <  2:121619/100‑1 (MQ=255)
                                                                                 cTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACt                  >  1:110465/1‑100 (MQ=255)
                                                                                 cTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACt                  >  1:110713/1‑100 (MQ=255)
                                                                                 aagaaaCCCCGAAGACAGGCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACt                  >  1:1133170/6‑100 (MQ=38)
                                                                                  tttGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTa                 <  1:2238179/100‑1 (MQ=255)
                                                                                    tGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTAtt               >  1:1661114/1‑100 (MQ=255)
                                                                                    aaaCCCCGAAGACAGGCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTAtt               >  2:1831815/3‑100 (MQ=255)
                                                                                     gACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTAttt              >  2:636177/1‑100 (MQ=255)
                                                                                     aaCCCCGAAGACAGGCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCATGCTCATATCCAGGGTAATTTCGACCACTAttt              >  1:1500085/2‑100 (MQ=255)
                                                                                     aaCCCCGAAGACAGGCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTAttt              >  1:1213887/2‑100 (MQ=255)
                                                                                     aaCCCCGAAGACAGGCTTCGGGGTTTCATTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGCTAATTTCGACCACTAgtt              >  2:2875065/2‑100 (MQ=255)
                                                                                      aCCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTg             >  2:2376293/1‑100 (MQ=255)
                                                                                      aCCCCGAAGACAGGCTTCGGGGTTTCTTTTTGTCTGCTTTTTCACCACAATCCCCCTTCCCCGTCTCGCTCATATCCAGGGTCATTTCGTCCCCTATTTg             >  2:2490698/1‑100 (MQ=255)
                                                                                      aCCCCGAAGACAGGCTTCGGGGTTTCTTTTTGCCTGGTGAGTCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTg             >  1:2020050/1‑100 (MQ=255)
                                                                                      aCCCCGAAGACAGGCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTg             >  2:2436737/1‑100 (MQ=255)
                                                                                       ccccGAAGCCTGTCTTCGGGGTTTCTTTTTTTTTTTTTTTTCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGc            >  2:1408561/1‑100 (MQ=255)
                                                                                       ccccGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGc            <  2:2667396/100‑1 (MQ=255)
                                                                                       ccccGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGc            <  1:2194273/100‑1 (MQ=255)
                                                                                       ccccGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGc            <  2:3207581/100‑1 (MQ=255)
                                                                                       ccccGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGc            >  1:3095018/1‑100 (MQ=255)
                                                                                       ccccGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTCGc            >  1:2652425/1‑100 (MQ=255)
                                                                                       ccccGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATGTGc            >  1:833940/1‑100 (MQ=255)
                                                                                       ccccGAAGACAGGCTTCGGGGTTTCTTTTTGCCTGGTGCATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATCTGc            >  2:2551186/1‑100 (MQ=255)
                                                                                       ccccGAAGACAGGCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGc            >  1:291816/1‑100 (MQ=255)
                                                                                       ccccGAAGACAGGCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGc            >  1:1700024/1‑100 (MQ=255)
                                                                                       ccccGAAGACAGGCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGc            >  2:451859/1‑100 (MQ=255)
                                                                                       ccccGAAGACAGGCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGc            >  2:2099722/1‑100 (MQ=255)
                                                                                       ccccGAAGACAGGCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGc            >  2:2012057/1‑100 (MQ=255)
                                                                                       ccccGAAGACAGGCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGc            >  2:2012042/1‑100 (MQ=255)
                                                                                        cccGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGCt           >  2:673630/1‑100 (MQ=255)
                                                                                         ccGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGCta          >  2:1177721/1‑100 (MQ=255)
                                                                                              gCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGCTatatat     >  1:427295/1‑100 (MQ=255)
                                                                                               ccTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGCTATATAtt    <  1:1082467/100‑1 (MQ=255)
                                                                                                cTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGCTATATATtg   >  1:800571/1‑100 (MQ=255)
                                                                                                cTGTCTTCGGGGTTTCTTTTTGCCAGAAAAAAAAAAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGCTATATATtg   <  2:2118784/100‑1 (MQ=255)
                                                                                                 tGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGCTATATATtgt  <  2:2496405/100‑1 (MQ=255)
                                                                                                   |                                                                                                 
CAGCAGCTGCGGTAGGTATTTTTATCGGCGCACTGTTAAGCATGCGCAAATCGTAGTGCAAAAATGATAATAAATACGCGTCTTTGACCCCGAAGCCTGTCTTCGGGGTTTCTTTTTGCCTGGTGAATCACAAAAATCCCCCTACCCCGTCACGCTCATATCCAGGGTAATTTCGACCACTATTTGCTATATATTGT  >  NC_000913/2800420‑2800616

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑