New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_000913 1096961 =438 (0.880)30 (0.080)
+GGGATGAGAAGCCCCGACCGGGGTTCGA
8/222 NT 9.3% intergenic (+132/+604) ycdU/serX putative inner membrane protein/tRNA‑Ser
?NC_000913 1097094 = 292 (0.590)intergenic (+265/+471) ycdU/serX putative inner membrane protein/tRNA‑Ser

Only 100 of 201 total aligned reads displayed.

TGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1097109‑1096961
‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CAACTGGCTGTCGCCAGTTGTCGAC  >  NC_000913/1097094‑1097118
                                                                                                                                                      ||||||||||||||||||||||||||||                         
 gtcgtCAGCCAGTTGGACAGACCGTGAACGCAGTGATCGGGCTGCCCGCCGGTCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGG                                                     <  2:6119768/145‑1
  gctgtcGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGATTCAATCCCCCCCTCACCGCCAGAATTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGG                                                    >  1:2258291/7‑150
  GCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGG                                                    >  1:4153399/1‑150
   CGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGTAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGA                                                   <  2:716218/150‑1
   CGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACCCACCGGGGGGA                                                   >  1:5985014/1‑150
   CGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGA                                                   <  2:7006116/150‑1
    gtCAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCTGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGAT                                                  <  1:7834754/148‑1
    GACAGCCAGTTGGTCTGACGGTGAACGCCTTGAGCGGGCTGCCCGCCGCCCGAGCGATGCGTGACAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGAT                                                  <  2:7630977/150‑1
    GACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCCTATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGAT                                                  >  1:6827450/1‑150
    GACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGAT                                                  >  1:3899291/1‑150
    GACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGAT                                                  <  1:4922530/150‑1
    GACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGAT                                                  >  2:6187257/1‑150
        GCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGA                                              >  1:6149955/1‑150
        GCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGA                                              <  1:5727007/150‑1
          CAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAG                                            <  2:7394188/150‑1
           AGTTGGACAGACCGAGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGC                                           <  1:1341419/150‑1
            GTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCC                                          <  1:8121540/150‑1
             tttGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGTGCGATCGATGGGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCC                                         <  1:352134/147‑1
             TTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGCTTTTTTTTTCTTATATTGAACACACCGGGGGGAGGAGAAGCa                                          >  2:8089795/1‑149
             TTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCC                                         <  1:3197877/150‑1
             TTGGACAGACCGTGAACGCAGGGAGCGGGCTGCCCGCCGGGCGAGCGACGGGAGTCAATCCCCCCCTCACCGCCATCTTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCC                                         <  2:8047576/150‑1
                gtCAGACCGTGAACGCAGTGAGCGTGCTGCCAGCCGTGCGATCGTTGGGAGACAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGA                                      <  2:4678273/148‑1
                   tGACCGTGAACGCAGTGATCGGGCTGCGCGCCGGGCGTTCGTCGCGATTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCG                                   <  2:1825381/149‑1
                   AGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCG                                   >  2:7804194/1‑150
                   AGACCGTGAACGCAGTGAGCGGGCTCCCGGCAGCGCGATCGTTGGGTGCCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCG                                   <  2:8133227/150‑1
                    GACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGG                                  >  2:6517660/1‑150
                    GACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGG                                  >  2:7066656/1‑150
                    GACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGG                                  <  2:2201390/150‑1
                     ACCGTGAACGCTGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGG                                 <  1:7483901/150‑1
                     ACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACTGGGGGGATGAG                                               >  1:6865792/1‑136
                     ACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACTGGGGGGATGAG                                               <  2:6865792/136‑1
                     ACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGG                                 >  1:5810274/1‑150
                      CCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGG                                <  2:2857346/150‑1
                      CCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGG                                >  2:7702353/1‑150
                      CCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCACTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGG                                >  1:2968882/1‑150
                        GTGAACGCAGTGAGCGGGCTGCCCGCGGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTT                              <  2:8275244/150‑1
                         TGAACGCCGTGAGCGGGCTGCCCGCCGGGCGAGCGCAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTC                             <  2:1391404/150‑1
                         TGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTC                             <  1:4686839/150‑1
                         TGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTC                             <  1:1953425/150‑1
                            ACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAACGTAAGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGAC                          >  2:1558209/1‑150
                            ACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑‑TTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACA                         >  2:1686429/1‑150
                             CGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGGTCGACA                         >  2:4694780/1‑150
                               CAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACC‑GGGGGATGAGAAGCCCCGACCGGGGTTCGACAACT                      <  1:8100911/150‑1
                                AGTGAGCGGGCTGCCCGCCGGGCGAGCGCCGCGAGTCAATCCCCCCCGCACCGCCATATTTAAAGAAGAGCTCGTACGACAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACT                      <  1:5009525/150‑1
                                AGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGA                                                   >  1:3130399/1‑121
                                AGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGA                                                   <  2:3130399/121‑1
                                  TGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGG                    <  2:3408142/150‑1
                                  TGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCACACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGG                    <  1:33208/150‑1
                                    AGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCC                                         >  1:4451254/1‑127
                                      CGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGA                                      <  1:7548212/128‑1
                                      CGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGA                                      >  2:7548212/1‑128
                                       GGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCTGTC               <  1:5316702/150‑1
                                        GGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGAC                                     >  2:3439113/1‑127
                                        GGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGAC                                     <  1:3438401/127‑1
                                         GCTGCCCGCCGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCAGATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCTGTCGC             <  2:2600813/150‑1
                                              CCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCTGTCGCCAGTT        <  2:4626236/150‑1
                                                GCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCTGTCGCCAGTTGT      <  2:3077163/150‑1
                                                    GGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTGTATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGGTCGACAACTGGCTGTCGCCAGTTGTCGAC  <  2:1984167/150‑1
                                                    GGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACA                         <  2:8401006/127‑1
                                                    GGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACA                         >  1:8401006/1‑127
                                                                      ATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAATGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGTTGAGAAGCCCCGACCGGGGTTC                             <  1:5690510/105‑1
                                                                         CCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGC                                           <  2:2065928/88‑1
                                                                         CCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGC                                           >  1:2065928/1‑88
                                                                          CCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGG                    <  2:2483731/110‑1
                                                                            CCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGA                                                   >  2:3315606/1‑77
                                                                             CCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGG                                 <  1:6513624/94‑1
                                                                                 ACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAA                        <  2:4342013/99‑1
                                                                                    gcaATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTTTATTGCACACACCGGGGGGA                                                   >  1:12015/4‑69
                                                                                      CATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGG                                                     >  1:5248833/1‑65
                                                                                      CATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGG                                                     <  2:5248833/65‑1
                                                                                            TAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTTTATTGCACACACCGGGGGGATGAGAA                                             <  1:2778691/67‑1
                                                                                             nAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACT                      >  1:7902116/2‑89
                                                                                             AAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACT                      <  2:7902116/89‑1
                                                                                             AAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGG                                  >  2:3855992/1‑77
                                                                                              AAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGAC                          >  1:4514282/1‑84
                                                                                              AAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGAC                          <  2:4513785/84‑1
                                                                                               AGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAG                                            >  1:248778/1‑65
                                                                                                   GAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGG                    <  1:8006963/85‑1
                                                                                                      CTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGA                                      >  2:4776115/1‑64
                                                                                                      CTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGA                                      <  1:4776115/64‑1
                                                                                                         GTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGC                   >  2:5906063/1‑80
                                                                                                         GTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGAC                                     >  1:1121339/1‑62
                                                                                                         GTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGAC                                     <  2:1121339/62‑1
                                                                                                             GAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGA                           <  1:6372080/68‑1
                                                                                                             GAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGA                           >  2:6372080/1‑68
                                                                                                               AAGTACGGGC‑TTTTTTTTCGTATATTGCACACCCCGGGGGGATGAGAAGCCCCGACCGGGGTTC                             <  2:7298743/64‑1
                                                                                                               AAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTC                             >  1:7298743/1‑64
                                                                                                                     GGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGA                           <  1:5998600/60‑1
                                                                                                                     GGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGA                           >  2:8036665/1‑60
                                                                                                                     GGGC‑TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGA                           >  2:5998600/1‑60
                                                                                                                          TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAA                        <  2:3123675/59‑1
                                                                                                                          TTTTTTTTCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAA                        >  1:3123675/1‑59
                                                                                                                                 TCGTATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGCTGTCGCCAGTTGT      <  1:1522098/70‑1
                                                                                                                                    TATATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGGC                   <  2:570994/54‑1
                                                                                                                                      TATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGG                                 >  2:7860130/1‑38
                                                                                                                                      TATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGG                                 <  1:6903815/38‑1
                                                                                                                                      TATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGG                                 <  2:50024/38‑1
                                                                                                                                      TATTGCACACACCGGGGGGATGAGAAGCCCCGACCGGG                                 <  1:7860130/38‑1
                                                                                                                                        TTGCACACACCGGGGGGATGAGAAGCCCCGACCGGGGTTCGACAACTGc                    >  2:483015/1‑48
                                                                                                                                                          TGAGAAGCCCCGACCGGGGTTCGACAACTGGCTGTCGCCAGTT        <  1:3256317/43‑1
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TGGCGACAGCCAGTTGGACAGACCGTGAACGCAGTGAGCGGGCTGCCCGCAGGGCGAGCGAAGCGAGTCAATCCCCCCCTCACCGCCATATTTAAAGAAGAGCTCGTACGAAAGTACGGGC‑TTTTTTTTCGTATATTGCACACACCGGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  NC_000913/1097109‑1096961
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Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.