| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4455824 | 513 (1.030) | 5 (0.010) | 4/270 | NT | 0.99% | coding (40/1374 nt) | mpl | UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase |
| ? | NC_000913 | = 4455855 | 500 (1.030) | coding (71/1374 nt) | mpl | UDP‑N‑acetylmuramate:L‑alanyl‑gamma‑D‑glutamyl‑ meso‑diaminopimelate ligase | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
TGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4455673‑4455824‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggCCTAACTGGCGCGCCAGCATCGCCAGACCGCCCATAAATGTGCCACAAATTCCTAAAATATGAATGCGCATACGTCACTATCCTTTTTTAATCTGCCGCTCATTTTACGCATATGTCGGGCAAGTGAGAAACGCATTTCAGGATAATCC < NC_000913/4455855‑4455707 tggTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTAT < 2:7473852/147‑1tggTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTAT < 1:655635/147‑1TGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTAT < 2:5583905/150‑1TGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTAT < 2:1512711/150‑1TGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTAT < 2:1778875/150‑1TGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTAT > 2:3682656/1‑150TGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTAT < 1:655294/150‑1TGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTAT < 2:6824273/150‑1TGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTAT < 1:3116063/150‑1 GTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTATG > 1:4381943/1‑150 GTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTATG < 1:3738993/150‑1 GTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTATG < 2:6864599/150‑1 GTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTATG < 2:6864791/150‑1 TTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTATGG < 2:1247485/150‑1 TTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTATGG < 2:4841817/150‑1 TTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTATGG < 2:480889/150‑1 TTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTATGG < 2:480212/150‑1 TTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTATGG < 2:480105/150‑1 TTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTATGG < 2:871915/150‑1 TTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTATGG < 1:7485963/150‑1 TTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTATGG < 1:5143257/150‑1 ATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTATGGCCTAACTGGCGCGCCAGCAT > 2:1464497/1‑133 ATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTATGGCCTAACTGGCGCGCCAGCAT < 1:1464497/133‑1 CCTGAAAGGCGTTTCTCACGTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTATGGCCTAACTGGCGCGCCAGCATCGCCAGACCGCCCATAAAT < 1:6633456/150‑1 ATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTATGGCCTAACTGGCGCGCCAGCATCGCCAGACCGCCCATAAATGTGCCA < 2:4512090/150‑1 ATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTATGGCCTAACTGGCGCGCCAGCATCGCCAGACCGCCCATAAATGTGCCA < 2:4512340/150‑1 ATGGCCTAACTGGCGCGCCAGCATCGCCAGACCGCCCATAAATGTGCCACAAATTCCTAAAATATGAATGCGCATACGTCACTATCCTTTTTTAATCTGCCGCTCATTTTACGCATATGTCGGGCAAGTGAGAAACGCATTTCAGGATAA > 1:701896/1‑150 ATGGCCTAACTGGCGCGCCAGCATCGCCAGACCGCCCATAAATGTGCCACAAATTCCTAAAATATGAATGCGCATACGTCACTATCCTTTTTTAATCTGCCGCTCATTTTACGCATATGTCGGGCAAGTGAGAAACGCATTTCAGGATAA < 1:3467312/150‑1 ATGGCCTAACTGGCGCGCCAGCATCGCCAGACCGCCCATAAATGTGCCACAAATTCCTAAAATATGAATGCGCATACGTCACTATCCTTTTTTAATCTGCCGCTCATTTTACGCATATGTCGGGCAAGTGAGAAACGCATTTCAGGATAA > 1:134820/1‑150 TGGCCTAACTGGCGCGCCAGCATCGCCAGACCGCCCATAAATGTGCCACAAATTCCTAAAATATGAATGCGCATACGTCACTATCCTTTTTTAATCTGCCGCTCATTTTACGCATATGTCGGGCAAGTGAGAAACGCATTTCAGGATAAT > 1:6771721/1‑150 TGGCCTAACTGGCGCGCCAGCATCGCCAGACCGCCCATAAATGTGCCACAAATTCCTAAAATATGAATGCGCATACGTCACTATCCTTTTTTAATCTGCCGCTCATTTTACGCATATGTCGGGCAAGTGAGAAACGCATTTCAGGATAAT > 1:6771718/1‑150 TGGCCTAACTGGCGCGCCAGCATCGCCAGACCGCCCATAAATGTGCCACAAATTCCTAAAATATGAATGCGCATACGTCACTATCCTTTTTTAATCTGCCGCTCATTTTACGCATATGTCGGGCAAGTGAGAAACGCATTTCAGGATAAT < 2:6257339/150‑1 TGGCCTAACTGGCGCGCCAGCATCGCCAGACCGCCCATAAATGTGCCACAAATTCCTAAAATATGAATGCGCATACGCCACTATCCTTTTTTAATCTGCCGCTCATTTTACGCATATGTCGGGCAAGTGAGAAACGCATTTCAGGATAAT < 1:6362715/150‑1 GGCCTAACTGGCGCGCCAGCATCGCCAGACCGCCCATAAATGTGCCACAAATTCCTAAAATATGAATGCGCATACGTCACTATCCTTTTTTAATCTGCCGCTCATTTTACGCATATGTCGGGCAAGTGAGAAACGCATTTCAGGATAATC < 1:5425829/150‑1 GCCTAACTGGCGCGCCAGCATCGCCAGACCGCCCATAAATGTGCCACAAATTCCTAAAATATGAATGCGCATACGTCACTATCCTTTTTTAATCTGCCGCTCATTTTACGCATATGTCGGGCAAGTGAGAAACGCATTTCAGGATAATCC > 2:5984955/1‑150 GCCTAACTGGCGCGCCAGCATCGCCAGACCGCCCATAAATGTGCCACAAATTCCTAAAATATGAATGCGCATACGTCACTATCCTTTTTTAATCTGCCGCTCATTTTACGCATATGTCGGGCAAGTGAGAAACGCATTTCAGGATAATCC > 1:2919096/1‑150 GCCTAACTGGCGCGCCAGCATCGCCAGACCGCCCATAAATGTGCCACAAATTCCTAAAATATGAATGCGCATACGTCACTATCCTTTTTTAATCTGCCGCTCATTTTACGCATATGTCGGGCAAGTGAGAAACGCATTTCAGGATAATCC > 1:2677343/1‑150 GCCTAACTGGCGCGCCAGCATCGCCAGACCGCCCATAAATGTGCCACAAATTCCTAAAATATGAATGCGCATACGTCACTATCCTTTTTTAATCTGCCGCTCATTTTACGCATATGTCGGGCAAGTGAGAAACGCATTTCAGGATAATCC > 2:830725/1‑150 GCCTAACTGGCGCGCCAGCATCGCCAGACCGCCCATAAATGTGCCACAAATTCCTAAAATATGAATGCGCATACGTCACTATCCTGTTTTAATCTGCCGCTCATTTTACGCATATGTCGGGCAAGTGAGAAACGCATTTCAGGATAATCC > 1:6547267/1‑150 TGTTGCGCTCAGGTGAATCGCGCCAGCAAATTACGGATTATCCTGAAATGCGTTTCTCACTTGCCCGACATATGCGTAAAATGAGCGGCAGATTAAAAAAGGATAGTGACGTATGCGCATTCATATTTTAGGAATTTGTGGCACATTTATGG‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4455673‑4455824‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑atggCCTAACTGGCGCGCCAGCATCGCCAGACCGCCCATAAATGTGCCACAAATTCCTAAAATATGAATGCGCATACGTCACTATCCTTTTTTAATCTGCCGCTCATTTTACGCATATGTCGGGCAAGTGAGAAACGCATTTCAGGATAATCC < NC_000913/4455855‑4455707 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |