New junction evidence | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
* | ? | NC_000913 | = 4516889 | 587 (1.180) | 11 (0.020) | 7/276 | NT | 1.8% | coding (829/954 nt) | fecR | anti‑sigma transmembrane signal transducer for ferric citrate transport; periplasmic FecA‑bound ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator |
? | NC_000913 | = 4516925 | 611 (1.230) | coding (793/954 nt) | fecR | anti‑sigma transmembrane signal transducer for ferric citrate transport; periplasmic FecA‑bound ferric citrate sensor and cytoplasmic FecI ECF sigma factor activator | |||||
Rejected: Frequency below/above cutoff threshold. |
CAATCGAAATAAGAATTATTTTCCTTACAGTGGTGAAATGTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTGCGCGATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4516740‑4516889 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCCGGGCTGCGCCTGAGCGGGACGTTCCCGCTGAAAAATACCGATGCGATCCTGAACGTTATCGCGCAAACGCTTCCCGTTAAAATTCAGTCTATTACGCGGTACTGGATAAACAT < NC_000913/4516925‑4516777 CAATCGAAATAAGAATTATTTTCCTTACAGTGGTGAAATGTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTGCGCGATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCC < 2:8098225/150‑1 GTGGTGAAATGTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTGCGCGATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGTGCTGCGCTGCGATCCCGC < 2:744636/150‑1 GTGGTGAAATGTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTGCGCGATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCCGCAACGGCGTGCTGCGCTGCGATCCCGC < 1:8284012/150‑1 GTGGTGAAATGTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTGCGCGATAACGTTCAGGATCGCATCGATATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGTGCTGCGCTGCGATCCCGC < 1:616507/150‑1 GTGGTGAAATGTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTGCGCGATAACGTTCAGGATCGCATCGATATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGTGCTGCGCTGCGATCCCGC < 1:616621/150‑1 TGGTGAAATGTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTGCGCGATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGTGCTGCGCTGCGATCCCGCC < 2:5045999/150‑1 AAATGTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTGCGCGATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGC < 1:1738047/150‑1 GTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTGCGCGATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCCGGG < 2:7792016/150‑1 CCAGTACCGCGTAATAGACTGAATTTTACCGGGAAGCGTTTGCGCGATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCCGGGCTGCGC < 2:8017283/150‑1 CCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTGCGCGATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCGGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCCGGGCTGCGC < 2:8016127/150‑1 GTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCCGGGCT > 1:1734146/1‑95 GTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCCCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCCGGGCT < 2:1734146/95‑1 CCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCCGGGCTGCGCCTGAGCGGGACGTTCCCGCTGAAAAATACCGATGCGATCCTGAACGTTATCGCGCAAACGCTTCCCGTTAAAATTCAGTCTATTACGCGGTACTGGCTAAACAT > 2:3767866/1‑150 CCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCCGGGCTGCGCCTGAGCGGGACGTTCCCGCTGAAAAATACCGATGCGATCCTGAACGTTATCGCGCAAACGCTTCCCGTTAAAATTCAGTCTATTACGCGGTACTGGATAAACAT < 1:2858409/150‑1 CCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCCGGGCTGCGCCTGAGCGGGACGTTCCCGCTGAAAAATACCGATGCGATCCTGAACGATATCGCGCAAACGCTTCCCGTTCAAATTCAGTCTATTACGCGGTACTGGATAAACAT > 2:3030925/1‑150 CAATCGAAATAAGAATTATTTTCCTTACAGTGGTGAAATGTTTATCCAGTACCGCGTAATAGACTGAATTTTAACGGGAAGCGTTTGCGCGATAACGTTCAGGATCGCATCGGTATTTTTCAGCGGGAACGTCCCGCTCAGGCGCAGCCC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4516740‑4516889 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑cCGCAACGGCGTGCTGCGCTGCGATCCCGCCGTTGCCGGGCTGCGCCTGAGCGGGACGTTCCCGCTGAAAAATACCGATGCGATCCTGAACGTTATCGCGCAAACGCTTCCCGTTAAAATTCAGTCTATTACGCGGTACTGGATAAACAT < NC_000913/4516925‑4516777 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
Reads not counted as support for junction |
read_name Not counted due to insufficient overlap past the breakpoint. |
read_name Not counted due to not crossing MOB target site duplication. |