| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | = 4633109 | 654 (1.310) | 11 (0.020) | 6/276 | NT | 1.7% | noncoding (19/140 nt) | REP355 (repetitive extragenic palindromic) element; contains 3 REP sequences | REP355 (repetitive extragenic palindromic) element; contains 3 REP sequences |
| ? | NC_000913 | = 4633145 | 638 (1.290) | noncoding (55/140 nt) | REP355 (repetitive extragenic palindromic) element; contains 3 REP sequences | REP355 (repetitive extragenic palindromic) element; contains 3 REP sequences | |||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACGT‑‑‑‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4632960‑4633109‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCACGCGTAATCGTCGC < NC_000913/4633145‑4632997 CCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACGT‑‑‑‑G > 2:1976267/1‑150CCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACGT‑‑‑‑G > 2:1237454/1‑150CCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACGT‑‑‑‑G > 2:123296/1‑150CCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACGT‑‑‑‑G > 2:2076921/1‑150CCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACGT‑‑‑‑G < 1:3500498/150‑1CCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACGT‑‑‑‑G > 2:2257762/1‑150CCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACGT‑‑‑‑G > 1:4803837/1‑150CCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACGT‑‑‑‑G > 2:2257823/1‑150CCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACGT‑‑‑‑G > 1:6836867/1‑150 AGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACGT‑‑‑‑GCC > 1:4891923/1‑150 GCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACGT‑‑‑‑GGCGCATCAGGCATTCGGTGCACGATGCC < 1:5013549/150‑1 CATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACGT‑‑‑‑GCCGCATCCGGCATTCGGTGCACGATGCCTGATG < 1:4841654/150‑1 GCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACGT‑‑‑‑GCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCC < 1:4836851/150‑1 CGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACGT‑‑‑‑GGCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGT < 2:1359940/150‑1 TTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACGT‑‑‑‑GCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTT < 1:3270271/150‑1 TTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACGT‑‑‑‑GCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTT < 1:7470813/150‑1 TTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACGT‑‑‑‑GCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTT < 1:3268763/150‑1 CGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAAGGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACGT‑‑‑‑GCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAG < 1:7484422/150‑1 GATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAG < 2:4139333/150‑1 GATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAG < 2:7474008/150‑1 GATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGGCGTTCACGCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAG < 2:4139356/150‑1 GCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATTAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCACGCGTAATCGTCGC > 2:6118490/1‑150 GCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATTAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCACGCGTAATCGTCGC > 2:1884973/1‑150 GCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCACGCGTAATCGTCGC < 2:4977447/150‑1 GCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCACGCGTAATCGTCGC < 2:8239942/150‑1 GCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCACGCGTAATCGTCGC > 2:6611787/1‑150 GCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCACGCGTAATCGTCGC > 2:6611918/1‑150 GCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCACGCGTAATCGTCGC > 1:1024308/1‑150 GCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCACGCGTAATCGTCGC < 1:7449814/150‑1 GCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCACGCGTAATCGTCGC < 1:741801/150‑1 GCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCACGCGTAATCGTCGC > 1:7250721/1‑150 GCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCACGCGTAATCGTCGC < 1:3965514/150‑1 GCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCACGCGTAATCGTCGC > 1:1899042/1‑150 GCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCACGCGTAATCGTCGC > 1:1898999/1‑150 CCAGCGTGAGTTAAAAAATGAACTCGGCGCAGGCATCGCGACGATTACGCGTGGATCTAACAGCCTGAAAGCCGCGCCCGTCGAGCTGCGCCAGTGGCTGGAAGAGGTGTTGCTGAAAAGCGATTGATTTTGTAGGCCTGATAAGACGT‑‑‑‑G‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ > NC_000913/4632960‑4633109‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑gCCGCATCCGGCATTCGGTGCACGATGCCTGATGCGCCACGTCTTATCAGGCCTACAAAATCAATCGCTTTTCAGCAACACCTCTTCCAGCCACTGGCGCAGCTCGACGGGCGCGGCTTTCAGGCTGTTAGATCCACGCGTAATCGTCGC < NC_000913/4633145‑4632997 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |