| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 1,104,932 | C→T | 5.1% | intergenic (+30/‑29) | csgA → / → csgC | curlin subunit, amyloid curli fibers, cryptic/curli assembly protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 1,104,932 | 0 | C | T | 5.1% | 1793.6 / 51.7 | 525 | intergenic (+30/‑29) | csgA/csgC | curlin subunit, amyloid curli fibers, cryptic/curli assembly protein |
| Reads supporting (aligned to +/- strand): ref base C (245/252); new base T (21/6); total (266/259) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.89e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.23e-01 | |||||||||||
Only 100 of 540 total aligned reads displayed.
TGACGGTTAAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCTGTGCAGAG > NC_000913/1104784‑1105081 | ggTTAAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGcc < 2:4212215/150‑1 (MQ=255) ggTTAAACAGTTCGGTGGTGGCAACGGTGCTGCAGTCGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGcc < 1:6844566/150‑1 (MQ=255) gTTAAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGccc > 1:4296131/1‑150 (MQ=255) ttAAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑t > 1:6679424/1‑150 (MQ=255) ttAAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑t > 1:8431170/1‑150 (MQ=255) aaCAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑tt > 2:3470497/1‑150 (MQ=255) aCAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑ttt > 2:5178038/1‑150 (MQ=255) aCAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑ttt > 2:2134224/1‑150 (MQ=255) cAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑tttt < 2:7046978/150‑1 (MQ=255) aGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACACGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCTTGCGCCC‑TG‑tttct < 2:7408167/150‑3 (MQ=255) ttCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑ttttttt > 2:1320118/1‑150 (MQ=255) tCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑tttttttt < 1:3793631/150‑1 (MQ=255) cGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTTGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTc < 2:6571301/150‑1 (MQ=255) cGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTc > 2:1020855/1‑150 (MQ=255) cGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTc < 1:2368112/150‑1 (MQ=255) ggtggtGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCg < 2:5790123/150‑1 (MQ=255) gtggtgGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCgg < 2:8417514/150‑1 (MQ=255) gtggtgGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCgg < 2:2299119/150‑1 (MQ=255) gtggtgGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCgg < 1:583530/150‑1 (MQ=255) ggtggCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGga < 1:562656/150‑1 (MQ=255) tggCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGgaga > 1:2691526/1‑150 (MQ=255) gCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGagaag > 1:7195193/1‑150 (MQ=255) ggTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAatat < 1:6371381/150‑1 (MQ=255) ggTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAatat > 2:3266425/1‑150 (MQ=255) gctgcAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGaa < 1:465364/150‑1 (MQ=255) ctgcAGGTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAAt < 2:2820622/150‑1 (MQ=255) ttGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACCGGGCGCAAGCCC‑TG‑ATTTTTTTCGGGAGAAGAATATGAATACGtta < 1:1635886/150‑1 (MQ=255) ttGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGtta > 2:7133402/1‑150 (MQ=255) tGACCAGACTGCATCTAACTCCTCTGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGttat < 1:3592104/150‑1 (MQ=255) aCCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGttatta > 1:7653855/1‑150 (MQ=255) aCCAGACTGCATCTAACGCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAAGACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGATTATGAATACGttatta < 2:4794865/150‑1 (MQ=255) cAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACt < 1:8108816/150‑1 (MQ=255) cAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACt > 2:7315074/1‑150 (MQ=255) tGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTg > 1:7139549/1‑150 (MQ=255) gCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGc < 2:6688443/150‑1 (MQ=255) aTCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCgg < 2:7923769/150‑1 (MQ=255) cTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCa > 1:7079830/1‑150 (MQ=255) cTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCa > 1:6132869/1‑150 (MQ=255) tAACTCCTCCGTCAACTTTAATCATGTTTGCTTTGTTAAAAACGCGTACTCTAATCAGTACTTATACATCATTTTTATTACATAAACAGGGCGCAAGCCCTTT‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCa < 1:4732272/150‑1 (MQ=255) tAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCAc < 2:4031341/150‑1 (MQ=255) tAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCAc > 1:4985039/1‑150 (MQ=255) aaCTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACt > 2:3013639/1‑150 (MQ=255) aaCTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCACTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACt < 2:2599473/150‑1 (MQ=255) aCTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACtt > 2:7614812/1‑150 (MQ=255) ctccGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCa > 1:7949145/1‑150 (MQ=255) ctccGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCa < 1:2139057/150‑1 (MQ=255) tCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAg > 1:2544200/1‑150 (MQ=255) gTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAAc < 2:5852239/150‑1 (MQ=255) cTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCttt < 1:548433/150‑1 (MQ=255) cAGGTTGGCTTTGGTAACAACGCGACCGCTCATCATTACTAATACATAATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTaa < 2:4489419/150‑1 (MQ=255) cAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTaa < 2:1182030/150‑1 (MQ=255) cAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTaa < 1:1020855/150‑1 (MQ=255) ggTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATa > 2:8234249/1‑150 (MQ=255) gTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATAc > 1:3560446/1‑150 (MQ=255) gTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCATTGCGGCACTTTCCAGTCAGATAACCTTTAATaa > 2:1647992/1‑149 (MQ=255) tGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGa < 2:1248861/150‑1 (MQ=255) ggCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGAc < 2:2792430/150‑1 (MQ=255) ttGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAg < 2:7810158/150‑1 (MQ=255) tGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGc > 1:1291383/1‑150 (MQ=255) ggTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCa > 2:5096003/1‑150 (MQ=255) ggTAACAACGCGACCGCTCATAAGTACTAATACATCATTTGGATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCa > 2:4942502/1‑150 (MQ=255) gTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCaa < 2:621279/150‑1 (MQ=255) tAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTc < 2:1836542/123‑1 (MQ=255) tAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTc > 1:1836542/1‑123 (MQ=255) acaacGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAggg > 2:4860679/1‑150 (MQ=255) acGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGAt < 1:5415912/150‑1 (MQ=255) gACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATgtgt < 1:1163761/150‑1 (MQ=255) gACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATgtgt < 1:4869412/150‑1 (MQ=255) ccGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGtat < 1:2231064/150‑1 (MQ=255) cGCTCATCAGTACTAATACATCATTTGTATCACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGtata > 2:1975021/1‑150 (MQ=255) cGCTCATCAGTACTAATACATCATTTGTAGTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTACGGACAAGGATAAGAATAAGTTATTACTCCGTTCGGCACATTCCAGGACGATTACCGTTAATGCGCCCCAGCCAGGGGGTGTGtatt > 2:549991/1‑149 (MQ=255) tcatcaGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCa < 1:8282508/150‑1 (MQ=255) tcaGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCatta > 2:3115876/1‑150 (MQ=255) gTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTc < 1:3407181/150‑1 (MQ=255) gTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTc < 1:3266425/150‑1 (MQ=255) gTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTc > 1:5070962/1‑150 (MQ=255) tAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGa > 2:1609776/1‑150 (MQ=255) tAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGa < 1:5220933/150‑1 (MQ=255) tAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGa > 2:6023878/1‑150 (MQ=255) aaTACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGaa < 2:3779877/150‑1 (MQ=255) aCATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTc > 2:7470911/1‑150 (MQ=255) catcatTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCa < 1:4455350/150‑1 (MQ=255) atcatTTGTATTACAGAAACAGGGCGCAAGCCC‑TGTTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCa > 2:5285298/1‑150 (MQ=255) atcatTTGTATTACAGAAACAGGGCGCAAGCCC‑AG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCAc > 1:7355870/1‑150 (MQ=255) tcatTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCAct < 1:5178039/150‑1 (MQ=255) catTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCActc < 1:6584367/150‑1 (MQ=255) atTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCActct > 2:1408131/1‑150 (MQ=255) atTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCActct > 1:3951677/1‑150 (MQ=255) tttGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCtt > 1:5957777/1‑150 (MQ=255) aTTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCa < 2:6132869/150‑1 (MQ=255) gaaaaaaaaCAGGGCTTGCGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGGGTATACCATTATTCCTGAAGTCACTCTTACTCaa > 2:4313/7‑150 (MQ=255) gaaaaaaaaCAGGGCTTGCGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGGTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCaa > 2:4280949/7‑150 (MQ=255) aCAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATc < 2:6999580/150‑1 (MQ=255) cAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCt > 2:3694529/1‑150 (MQ=255) aGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCtt > 2:8011532/1‑150 (MQ=255) aaaCAGGGCTTGCGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCCAGGGGCTGTGTATACCCTTATTCCTGAAGTCACTCTTACTCAAACTGGt > 2:6884214/1‑150 (MQ=255) aCAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCt < 1:3108654/150‑1 (MQ=255) gggCGCAAGCCC‑TGTTTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCtgt < 1:412741/150‑1 (MQ=255) ggCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCTGTGc > 1:7447819/1‑150 (MQ=255) cAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCTGTGCagag < 1:8234469/150‑1 (MQ=255) | TGACGGTTAAACAGTTCGGTGGTGGCAACGGTGCTGCAGTTGACCAGACTGCATCTAACTCCTCCGTCAACGTGACTCAGGTTGGCTTTGGTAACAACGCGACCGCTCATCAGTACTAATACATCATTTGTATTACAGAAACAGGGCGCAAGCCC‑TG‑TTTTTTTTCGGGAGAAGAATATGAATACGTTATTACTCCTTGCGGCACTTTCCAGTCAGATAACCTTTAATACGACCCAGCAAGGGGATGTGTATACCATTATTCCTGAAGTCACTCTTACTCAATCTTGTCTGTGCAGAG > NC_000913/1104784‑1105081 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |