| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 3,781,106 | G→C | 6.0% | intergenic (+89/‑109) | lldD → / → trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 3,781,106 | 0 | G | C | 6.0% | 1096.0 / 5.4 | 327 | intergenic (+89/‑109) | lldD/trmL | L‑lactate dehydrogenase, FMN‑linked/tRNA Leu mC34,mU34 2'‑O‑methyltransferase, SAM‑dependent |
| Reads supporting (aligned to +/- strand): ref base G (192/107); new base C (22/4); total (216/111) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 5.02e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 329 total aligned reads displayed.
GGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAA > NC_000913/3780957‑3781255 | ggggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCg < 2:2131703/150‑1 (MQ=255) ggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCTTGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCa < 1:4933599/150‑1 (MQ=255) ggCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCa < 2:7913608/150‑1 (MQ=255) tGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCAAACACACAACCACAGGGGGAGGGGGCCCGTCGGCGCTGTATGTACTCCCGCACACTG‑AAAAGACACCGcccgc > 1:2001497/1‑146 (MQ=255) ggTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCTAAACCACTCCCTCAGGGTGTGGGGACCGGTAGGGGGGGTTTGTACTGCCTCACTCTG‑AAACCACACCGcccaatt > 2:5087825/1‑144 (MQ=255) gTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCttt < 2:3793109/150‑1 (MQ=255) tAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTGGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCtttt < 1:1023524/150‑1 (MQ=255) tAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCtttt < 1:5410831/150‑1 (MQ=255) aaaGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCttttt < 1:5909587/150‑1 (MQ=255) agagTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCAAAACCAAACCCAAAGGGAGGGGGGGCCGGTCGGCGCTGTATGGACAACCAAACAAAG‑AAACGACACCCCCCACttttttt > 2:536338/1‑150 (MQ=255) agTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTtct < 2:651038/150‑1 (MQ=255) agTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTtct < 1:930693/150‑1 (MQ=255) ttGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTcc < 1:4334751/150‑1 (MQ=255) ttGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTcc < 2:5332119/150‑1 (MQ=255) ccTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTc < 1:5040332/150‑1 (MQ=255) tGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTTCGCCCCCCCAACCAAAACCACAACCGCAGGGGGGGGGGGCCCGTCGGGGCGGGTTTTTATCCCACCCGCTGTAAACG‑CACCGCCCGCTTTTTTTTTccccccc > 2:259623/1‑146 (MQ=255) gCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGcc < 1:6273602/150‑1 (MQ=255) gCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCAAAACCACACCCGCAGGGAGCGGGGCCCCGTCGGCGCGGTGTGTACTCCCGCACACAG‑AAAAGACACCCCACACTATTTTTAACCCAccccccc > 2:4646052/1‑149 (MQ=255) cACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGTGCCCCCTCACCCTAACCCTCTACCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACACTG‑CAAAGACACCGCCCTCTTTTTTTCTCCCTCGccccac > 2:7687820/1‑148 (MQ=255) cTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCg < 1:971680/150‑1 (MQ=255) ggCTCCCCTGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCggg < 2:5000103/150‑1 (MQ=255) gCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTTCCCCCCCACACCCAAACCCAAAACCACAGGGAGGGGGGGCCCTTCCGCGCTGTATTTACTCCCACACACTG‑AAAACACAACCCACACTTTTTTTAACCCACGCCCCACCcggg > 2:2794773/1‑150 (MQ=255) cTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGga < 1:830057/150‑1 (MQ=255) cccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGgaga < 1:270109/150‑1 (MQ=255) ccATGGCGAATGGGAATGGGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGATTGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTT‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGagag < 1:1825566/150‑1 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTTTTCGCCCCCCCACCCCAAACCACACCCACAGGGTGCGGGGCCCCTTGGGGGCGGTTTGTAAACCCGCACACTG‑TAACGACCCCGCCCACATTTTTTAAACCGCGCCCCCCCcggggggg > 2:485342/1‑146 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTTTGGGCCCCCACACCCGAACCCACACCCAAAGGGAGAGGGGACCGGTCGGCGCGGTATGTACTACCACACTCTG‑AAACGAAACCGCACACATTTTTTATACCGCGCCCCACCGGGGggag > 2:5187648/1‑150 (MQ=255) ccATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCGCACCCAAACCCTCTACCACAGGGAGAGGGGACCCTTCGGCGCGGGAGGGACTCCCCCAAACTG‑AAACCACCCCGCCCACAATTGTTCTCCCTCGCCCCGCCcgggcgcg > 2:1082704/1‑146 (MQ=255) cATGGCGAACGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCAACCCCCCTCCCACAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAgg < 2:3601494/150‑1 (MQ=255) aTGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTACCCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAggg < 1:6683754/150‑1 (MQ=255) aTGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCTCCCCGGAGGGGCGAggg < 2:2053929/150‑1 (MQ=255) aTGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAggg < 1:7484268/150‑1 (MQ=255) cGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCgg < 1:1258372/150‑1 (MQ=255) gAAAGGGAATGCGGCATAGTCGTTTGTGCCCCCGCACCCGAAACCACTACCTCAGGGAGAGGGGACCGTTCGGCGCAGTATTTACTCCCACAAACAG‑AAACGACAACGCACACATTTTTTATACCTCGCCCCTCCGGGGAGAGGGCCggg > 2:8255165/1‑150 (MQ=255) aaGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGt < 1:5959875/150‑1 (MQ=255) ggAATGCGGCATAGTCGTTTTCCCCCCCGCACCCTAACCCACTCCCACAGGGCGATGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACCACACCGCACACTTTTTTTCTCCCACGCCCCACCGGGGTGAGGGCCggggggtg > 2:6275077/1‑146 (MQ=255) gAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgg < 2:4070041/150‑1 (MQ=255) gAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAgg < 2:6650677/150‑1 (MQ=255) gAATGCGGCATAGTCGTTTGCGCCCCCACCCCCCAACCCACACCCCCCCGGCGCGGGGACCCGGCCGCGCCGTAAGTACACCCACACACAG‑AAACGACACCCCACACATTTTTTCTCCCGCCCCCCACCCGGGAGAGGGCCGGGGGGAgg > 2:522659/1‑150 (MQ=255) gAATGCGGATTCGTCGTTTGCGCCCCCTCACCCTAACCCGCTCCCTCTGGGTGTGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCGCCCTCGCCCCGCCGGGGAGAGGGCCGGGGTGAgg < 1:3314425/150‑1 (MQ=255) caTGCGGCCGAGTCGTGTGCGCCCCCGCCCCCGACCCCTCGCCCTCCGGGAGAGGGGACCGTGCGGCGCTGTATGTACTCCCGCCCTCTG‑AAACGACCCCGCACTCTTTTTTTCGCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAggg < 2:6819514/149‑1 (MQ=255) ggCATAGTCGTTTGCGCCCCCCCACCCAAAACCACAACCACCGGGAGCGGGGACCCGTCGGCGCCGGTTGTACACCCGCACACAG‑AAACCACACCCCCCGCGTTTTTTAAACCGCGCCCCCCCCGGGGGCGGGCCGGGGGGAGGGGgaaa > 2:4538954/1‑150 (MQ=255) ggCAGAGTCGTTTGCGCCCCCTCCCCCTAACCCTCTCCCTCAGGGAGAGGTGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGaaaa < 2:7815787/150‑1 (MQ=255) tCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGGATGTACGCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCa > 2:4268956/1‑150 (MQ=255) gcCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCAc > 2:7475368/1‑150 (MQ=255) gcCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCAc > 2:6543196/1‑150 (MQ=255) cTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAAtt > 1:2468975/1‑150 (MQ=255) tCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAAttt > 1:7042338/1‑150 (MQ=255) tCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAAttt > 2:7229339/1‑150 (MQ=255) accTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCACCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGATCACCAATTTTCt > 1:7721953/2‑150 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTg > 2:1581205/1‑150 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTg > 1:4527583/1‑150 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTg > 1:523807/1‑150 (MQ=255) ccTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTg > 1:5657313/1‑150 (MQ=255) cTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGc > 2:2894383/1‑150 (MQ=255) gtaCCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCACCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAAATTTCTGCt > 1:2285785/3‑150 (MQ=255) aaCCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCACTTTTCTGCTa > 2:4398453/1‑150 (MQ=255) cccTCTCCCTGAGGGAGAGGGTACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATc > 1:3109319/1‑150 (MQ=255) cccTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATc > 2:121487/1‑150 (MQ=255) ccTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATcc > 1:39773/1‑150 (MQ=255) ctctCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCt > 1:1354193/1‑150 (MQ=255) ctcCCTGAGGGAGAGGGTACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGc > 2:2991353/1‑150 (MQ=255) ctcCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGc > 2:1742264/1‑150 (MQ=255) ctcCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGc > 2:2655485/1‑150 (MQ=255) ccTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGcccc > 1:7876326/1‑150 (MQ=255) ggAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACt > 2:8352574/1‑150 (MQ=255) gagaGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTa > 2:8195191/1‑150 (MQ=255) gagaGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTa > 2:8081761/1‑150 (MQ=255) gagaGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTa > 1:7781272/1‑150 (MQ=255) gggACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAgggg > 2:643621/1‑150 (MQ=255) gcacggTTCGGCGTTTTTTGTACCCACCCCCTCCT‑AACCGCCACCCCCCTCTTTTTTCCCCCCGGGCCCGCCGGGGGTTGGGGCGGGGGTGGGGGCACAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAggggg < 2:5552869/145‑1 (MQ=255) gACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGc > 1:4652259/1‑150 (MQ=255) aCCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCa > 1:7273114/1‑150 (MQ=255) ttCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTAt > 1:5535069/1‑150 (MQ=255) gcgcTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGCCAAGGCCGCACTGCTCACCAATTTTCTGCTCTCCTGCCCCCGCAGTAAGGGGGCCGTATGCtc > 2:6078489/1‑149 (MQ=255) cgcTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTaa > 1:1574978/1‑150 (MQ=255) cTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGTGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAAc > 2:1314730/1‑150 (MQ=255) cTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGACCCCGCACTAATGGGGCAGTATGCTAAAc > 1:5194557/1‑150 (MQ=255) atgtaCTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCg > 2:5828794/1‑150 (MQ=255) gtaCTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTa > 2:2570544/1‑150 (MQ=255) gtaCTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTa > 1:2950093/1‑150 (MQ=255) cTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACtt > 2:1442144/1‑150 (MQ=255) cccTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTa > 2:1529004/1‑150 (MQ=255) ccTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTAc > 2:5436279/1‑150 (MQ=255) ccTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTAc > 1:669441/1‑150 (MQ=255) ccTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTAc > 2:3434219/1‑150 (MQ=255) ccTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTAc > 1:2234079/1‑150 (MQ=255) cTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGACAAGGCCGCACTGCGCACCAAGTTTCTGCTATCCTGCCCCCGCACGAAGGGGGCAGTCTGCGCAACAGCGGACTTGACg > 2:7564468/1‑150 (MQ=255) cTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACg > 2:6752448/1‑150 (MQ=255) cTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACg > 1:2185385/1‑150 (MQ=255) accctcaaaCGACCCCCCCATTTTTTTCCCCCCCCCCCCCCGCGGGGGTGGGGGGGGGGGTGCGGGCACAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAAc < 2:1997275/144‑1 (MQ=255) tctG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCa > 2:25226/1‑150 (MQ=255) tctG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCa > 1:4114756/1‑150 (MQ=255) tctG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCa > 1:5477521/1‑150 (MQ=255) aaaCGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGaaa > 1:6730/1‑150 (MQ=255) aaCGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAAt > 2:3168770/1‑150 (MQ=255) aCGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAAtt > 1:6482388/1‑150 (MQ=255) gACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTcc > 1:3816267/1‑150 (MQ=255) acCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGcc > 1:8125799/1‑150 (MQ=255) cGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCaa > 2:6039589/1‑150 (MQ=255) | GGGGCTGGGTAAAGAGTTGCCTGCGGCACTGGCTCCCATGGCGAAAGGGAATGCGGCATAGTCGTTTGCGCCCCCTCACCCTAACCCTCTCCCTCAGGGAGAGGGGACCGTTCGGCGCTGTATGTACTCCCTCACTCTG‑AAACGACACCGCACTCTTTTTTTCTCCCTCGCCCCTCCGGGGAGAGGGCCGGGGTGAGGGGAAAAGGCCGCACTGCTCACCAATTTTCTGCTATCCTGCCCCCGCACTAAGGGGGCAGTATGCTAAACATCGTACTTTACGAACCAGAAATTCCGCCAAA > NC_000913/3780957‑3781255 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |