| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 273,534 | Δ1 bp | 5.0% | pseudogene (688/1108 nt) | ykfC → | CP4‑6 prophage; conserved protein;Phage or Prophage Related |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 273,534 | 0 | A | . | 5.0% | 336.0 / 9.2 | 99 | pseudogene (688/1108 nt) | ykfC | CP4‑6 prophage; conserved protein;Phage or Prophage Related |
| Reads supporting (aligned to +/- strand): ref base A (49/45); new base . (2/3); total (51/48) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.72e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.85e-01 | |||||||||||
Only 100 of 101 total aligned reads displayed.
GAAGGCTGTACGCCGCAGGATCAGTGACGCACGTTTCATGACTCTGCTGTGGAAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCAGAGAAAACTGGCAGTGGAAACCCGCGGTGGCGT > NC_000913/273386‑273681 | gaAGGCTGTACGCCGCAGGATCAGTGACGCACGTTTCATGACTCTGCTGTGGAAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAAca > 1:901088/1‑149 (MQ=255) tGTACGCCGCAGGATCAGTGACGCACGTTTCATGACTCTGCTGTGGAAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGc < 2:360482/149‑1 (MQ=255) gTACGCCGCAGGAGCAGTGACGCACGTTTCATGACTCTGCTGTGGAAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCt < 2:1443268/149‑1 (MQ=255) cgccgcAGGATCAGGGAGGCACGTTTCATGACTCTGCTGTGGAAAACCATCAAGGCGGGACATATCGCTGTCGGGCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGaa < 1:1042916/149‑1 (MQ=255) gccgcAGGATCAGTGACGCACGTTTCATGACTCTGCTGTGGAAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAAt > 2:1024748/1‑149 (MQ=255) ccgcAGGATCAGTGACGCACGTTTCATGACTCTGCTGTGGAAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATg > 1:702094/1‑149 (MQ=255) cgcAGGATCAGTGACGCACGTTTCATGACTCTGCTGTGGAAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGa < 1:917572/149‑1 (MQ=255) cgcAGGATCAGTGACGCACGTTTCATGACTCTGCTGTGGAAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGa > 1:1416164/1‑149 (MQ=255) aGGATCAGTGACGCTCGTTTCATGACTCGGCTGTGGAAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGGGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑Gtt < 2:1422906/149‑1 (MQ=255) ggATCAGTGACGCACGTTTCATGACTCTGCTGTGGAAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTc < 1:741478/149‑1 (MQ=255) agcAGTGACGCACGTTTCATGACTCTGCTGTGGAAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGa < 2:523830/147‑1 (MQ=255) cAGTGACGCACGTTTCATGACTCTGCGGTGGAAAACCCTCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATc < 2:459641/149‑1 (MQ=255) tGACGCACGTTTCATGACTCTGCTGTGGAAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAAt < 1:1365953/149‑1 (MQ=255) tGACGCACGTTTCATGACTCTGCTGTGGAAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAAC‑TCATTCAGCATGATGTTCGAtaata < 2:598055/149‑5 (MQ=255) gACGCACGTTTCATGACTCTGCTGTGGAAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAAC‑TCATTCAGCATGATGTTCGAtaatag < 1:485320/149‑6 (MQ=255) gACGCACGTTTCATGACTCTGCTGTGGAAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAAC‑TCATTCAGCATGATGTTCGAtaatag < 1:1464992/149‑6 (MQ=255) aCGTTTCATGACTCTGCTGTGGAAAACCATCAACGCGGGACATATCGATGTAGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGc > 1:1340350/1‑149 (MQ=255) aCGTTTCATGACTCTGCTGTGGAAAACAATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCCGTGTTATATCGCCGCTATTATCGAACATCATTCTGAATGA‑GTTCGATCAATACCTGc > 2:676612/1‑149 (MQ=255) aCTCTGCTGTGGAAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTa > 2:184982/1‑149 (MQ=255) ctctGCTGTGGTAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTAc < 2:326287/149‑1 (MQ=255) ctctGCTGTGGAAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTAc < 2:588016/149‑1 (MQ=255) tctGCTGTGGAAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTAcc > 1:579217/1‑149 (MQ=255) tctGCTGTGGAAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTAcc > 2:1374570/1‑149 (MQ=255) tgctgTGGAAAACCATCAAGGCGGGTCATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGAt < 2:1187396/125‑1 (MQ=255) tgctgTGGAAAACCATCAAGGCGGGTCATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGAt > 1:1187396/1‑125 (MQ=255) gtgGAAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTAATATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCg > 1:1475621/1‑149 (MQ=255) gaggAAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGACCg > 1:939969/3‑149 (MQ=255) tgGAAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCgg < 2:1537704/149‑1 (MQ=255) gAAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGa > 1:1321737/1‑149 (MQ=255) gAAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGa > 1:462242/1‑149 (MQ=255) aaaCCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATAGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGaaa < 1:186718/149‑1 (MQ=255) aaCCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAATGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGATACCTGAGCGGGAAAg > 2:33463/1‑149 (MQ=255) aCCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGc < 1:1255231/149‑1 (MQ=255) ccATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGcc > 2:1403242/1‑149 (MQ=255) aTCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAg > 1:130248/1‑149 (MQ=255) tCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGa > 2:660006/1‑149 (MQ=255) tCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGa > 2:870060/1‑149 (MQ=255) gggACATATCGATGTGGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATCTCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATc < 1:307223/149‑1 (MQ=255) gggACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATc < 2:699617/149‑1 (MQ=255) ggACATATCGATGTCGGTCTCTGTCGGGCGGCCAGTGAAGGTGTGCCACATGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACATTCATGATCGCTACATTATCGGGAAAGCCAGaaaaaaacc > 2:783810/1‑144 (MQ=255) gACATATCGATGTCGGGCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGGTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCgg < 1:318822/149‑1 (MQ=255) aCATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCggt < 2:1378098/149‑1 (MQ=255) aCATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCggt < 1:545196/149‑1 (MQ=255) cATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCggtg < 2:646137/149‑1 (MQ=255) atatCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCggtgg > 2:1107951/1‑149 (MQ=255) gATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGAGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTg > 2:734400/1‑149 (MQ=255) tGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGa < 2:893805/149‑1 (MQ=255) gTCGGTCACTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGaa < 2:275602/149‑1 (MQ=255) ggTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATaa < 2:584933/149‑1 (MQ=255) ggTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATaa < 1:1137581/149‑1 (MQ=255) ggTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATaa < 2:1540540/149‑1 (MQ=255) tctcTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCTTGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACa < 1:985816/149‑1 (MQ=255) tctcTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCAAGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACa < 1:189149/149‑1 (MQ=255) ctctTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAg > 1:243701/1‑149 (MQ=255) tctTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGt < 2:1060309/149‑1 (MQ=255) tctTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGt > 1:491630/1‑149 (MQ=255) tctTTCGGGCGGCCAGTGAAGGTGAGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGAGGTACAGGAATAACAGt > 1:1145585/1‑149 (MQ=255) ctTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTa < 2:1340350/149‑1 (MQ=255) cGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCa > 2:1058262/1‑149 (MQ=255) gcCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACgggg > 2:20624/1‑149 (MQ=255) gcCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTCCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTCGTACTGGAATAACAGTATCGACCgggg > 1:819477/1‑149 (MQ=255) cAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGcc > 1:334700/1‑149 (MQ=255) gTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGTTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGa > 2:1288110/1‑149 (MQ=255) tGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGATTGA‑GTTCGATCAATAGCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGaa < 2:134362/149‑1 (MQ=255) tGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGaa < 2:396491/149‑1 (MQ=255) tGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGaa > 1:1160823/1‑149 (MQ=255) aGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTa > 1:400757/1‑149 (MQ=255) gtgtGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTAcg > 1:1266196/1‑149 (MQ=255) ggtgCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTAcgg < 2:403513/148‑1 (MQ=255) ccACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGt < 2:702094/149‑1 (MQ=255) cacaGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTc > 2:911206/1‑149 (MQ=255) cacaGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGAGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTc > 2:542175/1‑149 (MQ=255) caGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCag > 1:670730/1‑149 (MQ=255) aGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCaga < 1:1024748/149‑1 (MQ=255) aGGGCGGGGTTATATCGCCGCTATTATCGAAAATCAGGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCaga < 1:766081/149‑1 (MQ=255) ggCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCAgaga > 2:45592/1‑149 (MQ=255) ttATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCAGAGAAAACTgg < 1:184982/149‑1 (MQ=255) ttATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCAGAGAAAACTgg > 2:1476587/1‑149 (MQ=255) ttATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCAGAGAAAACTgg < 2:870474/149‑1 (MQ=255) gtataGCGCCGCTATTATATAAAATCATGCTGAATGA‑GTTCGATCAATACCTTCCTGACCGCTACCTGACCGGGACAGCCAGAAAAGATCGGTGGTACTGTAATAACAGTATCCAACTGTGCCTAAGTACGGCGGTCATAGAAAACTgg < 2:237733/148‑1 (MQ=255) atatCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCAGAGAAAACTGGCa > 2:724044/1‑149 (MQ=255) atatCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCAGAGAAAACTGGCa > 2:111166/1‑149 (MQ=255) atatCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCAGAGAAAACTGGCa > 2:1565962/1‑149 (MQ=255) tatCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCAGAGAAAACTGGCAg > 1:1015617/1‑149 (MQ=255) tCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCAGAGAAAACTGGCAGTg > 1:1366077/1‑149 (MQ=255) tCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACCGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCAGAGAAAACTGGCAGTg < 2:1416164/149‑1 (MQ=255) cgccgcTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCAGAGAAAACTGGCAGTgg < 2:358451/149‑1 (MQ=255) cgcTATTATCGAACATCATGCTGAATGA‑GTGCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCAGAGAAAACTGGCAGTGGaaa < 2:130248/149‑1 (MQ=255) tattgatCGAAC‑TCATTCAGCATGATGTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCAGAGAAAACTGGCAGTGGAAAcc > 2:1414540/6‑149 (MQ=255) tattatCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCAGAGAAAACTGGCAGTGGAAAccc > 1:1200152/1‑149 (MQ=255) tattatCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCAGAGAAAACTGGCAGTGGAAAccc > 1:1206356/1‑149 (MQ=255) tattatCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCAGAGAAAACTGGCAGTGGAAAccc > 1:218114/1‑149 (MQ=255) attatCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCAGAGAAAACTGGCAGTGGAAACCcg < 1:724044/149‑1 (MQ=255) atCGAAC‑TCATTCAGCATGATGTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCAGAGAAAACTGGCAGTGGAAACCCGCgg > 2:750059/1‑149 (MQ=255) tCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCAGAGAAAACTGGCAGTGGAAACCCGCGGt > 2:396659/1‑149 (MQ=255) tCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCAGAGAAAACTGGCAGTGGAAACCCGCGGt > 2:1557190/1‑149 (MQ=255) aaCATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCAGAGAAAACTGGCAGTg < 2:663566/134‑1 (MQ=255) aaCATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCAGAGAAAACTGGCAGTg > 1:663566/1‑134 (MQ=255) aCATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCAGAGAAAACTGGCAGTGGAAACCCGCGGTGGCg < 1:3190/149‑1 (MQ=255) catcatGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCCGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCCAAGTACGGATGTCAGAGAAAACTGGCAGTGGAAACCCGCGGAGGCGt > 2:173878/1‑149 (MQ=255) | GAAGGCTGTACGCCGCAGGATCAGTGACGCACGTTTCATGACTCTGCTGTGGAAAACCATCAAGGCGGGACATATCGATGTCGGTCTCTTTCGGGCGGCCAGTGAAGGTGTGCCACAGGGCGGTGTTATATCGCCGCTATTATCGAACATCATGCTGAATGA‑GTTCGATCAATACCTGCATGAGCGCTACCTGAGCGGGAAAGCCAGAAAAGATCGGTGGTACTGGAATAACAGTATCCAACGGGGCCGAAGTACGGCGGTCAGAGAAAACTGGCAGTGGAAACCCGCGGTGGCGT > NC_000913/273386‑273681 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |