| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_000913 | 2,366,015 | Δ1 bp | 5.3% | coding (88/1140 nt) | arnB → | uridine 5'‑(beta‑1‑threo‑pentapyranosyl‑4‑ulose diphosphate) aminotransferase, PLP‑dependent |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NC_000913 | 2,366,015 | 0 | A | . | 5.3% | 384.0 / 12.3 | 114 | coding (88/1140 nt) | arnB | uridine 5'‑(beta‑1‑threo‑pentapyranosyl‑4‑ulose diphosphate) aminotransferase, PLP‑dependent |
| Reads supporting (aligned to +/- strand): ref base A (52/56); new base . (2/4); total (54/60) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 6.82e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.91e-01 | |||||||||||
Only 100 of 115 total aligned reads displayed.
CACAACACTCTTTATAGCAAATATAAGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCATATCACGCTAATGGCGTTGAAAATTGGCAAGGGCGATGAAGTGATTACG > NC_000913/2365869‑2366161 | cacaACACTCTTTATAGCAAATATAAGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTAGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATcaca < 2:819729/149‑1 (MQ=255) acaacaCTCTTTATAGCAAATATAAGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACaa > 2:4464/1‑149 (MQ=255) acaacaCTCTTTATAGCAAATATAAGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACaa > 1:46777/1‑149 (MQ=255) aacaCTCTTTATAGCAAATATAAGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAAcc > 1:506521/1‑149 (MQ=255) aacaCTCTTTATAGCAAATATAAGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAAcc > 2:577216/1‑149 (MQ=255) acTCTTTATAGCAAATATAAGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTGTGATC‑CAACCgga < 1:366253/149‑2 (MQ=255) ctctTTATAGCAAATATAAGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTGTGATC‑CAACCggat < 2:1344558/149‑3 (MQ=255) tctTTATAGCAAATATAAGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTcc > 2:1448183/1‑149 (MQ=255) tctTTATAGCAAATATAAGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTcc > 1:1243398/1‑149 (MQ=255) tttATAGCAAATATAAGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCga > 2:1324330/1‑149 (MQ=255) ttATAGCAAATATAAGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTGTGATC‑CAACCggattcga < 1:1354197/149‑7 (MQ=255) ttATAGCAAATATAAGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCgaa < 2:511400/149‑1 (MQ=255) aGCAAATATAAGTGGACAGGTATTCAATGGCTGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAAt < 1:1131071/149‑1 (MQ=255) aGCAAATATAAGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCTGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAAt > 1:1575016/1‑149 (MQ=255) aGCAAATATAAGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAAt < 1:1452460/149‑1 (MQ=255) aGCAAATATAAGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAAt < 1:599790/149‑1 (MQ=255) gCAAATATAAGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATc > 2:1154029/1‑149 (MQ=255) gCAAATATAAGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATc > 2:1102490/1‑149 (MQ=255) cAAATATAAGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGTCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCa > 1:1111255/1‑149 (MQ=255) cAAATATAAGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCa > 1:648793/1‑149 (MQ=255) cAAATATAAGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCa > 1:520024/1‑149 (MQ=255) cAAATATAAGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCa > 1:1071946/1‑149 (MQ=255) aaaTATAAGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAg < 1:716044/149‑1 (MQ=255) atatAAGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGgc > 1:271680/1‑149 (MQ=255) aaGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCtt < 2:1513749/149‑1 (MQ=255) aaGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCtt < 2:1377261/149‑1 (MQ=255) aaGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCtt < 2:1391169/149‑1 (MQ=255) tGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGCATCAGGCGCTTGAg > 2:1423525/1‑149 (MQ=255) tGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAg < 1:705994/149‑1 (MQ=255) tATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCttt < 1:1310678/149‑1 (MQ=255) tATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCttt < 1:4464/149‑1 (MQ=255) tATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCttt > 1:46459/1‑149 (MQ=255) aTTCAATGTCTGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCATCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCtttt < 1:1114806/149‑1 (MQ=255) aTTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCtttt < 2:462453/149‑1 (MQ=255) aTTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCtttt > 2:197202/1‑149 (MQ=255) aTTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCtttt < 1:1097212/149‑1 (MQ=255) ttCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTTCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCttttt < 1:657134/149‑1 (MQ=255) ttCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCttttt < 2:767729/149‑1 (MQ=255) ttCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCttttt > 2:1227220/1‑149 (MQ=255) aaTGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGcc > 1:808163/1‑149 (MQ=255) aaTGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGcc > 1:1044940/1‑149 (MQ=255) aaTGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGcc > 1:1330099/1‑149 (MQ=255) aTGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCa < 1:1488929/149‑1 (MQ=255) tGGCGGAAGGAAAAGCACTGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGGGGAGGAACTCGCTGCAGTTACAGAGGTGCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAg < 1:674406/149‑1 (MQ=255) tGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAg < 2:350043/149‑1 (MQ=255) aaggaaAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACg < 1:627917/149‑1 (MQ=255) aggaaAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACgg < 1:824413/149‑1 (MQ=255) aaaaGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGaa < 1:808204/149‑1 (MQ=255) aaaaGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGaa > 1:331277/1‑149 (MQ=255) aaaGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGaaa < 2:1590479/149‑1 (MQ=255) aaGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAAt > 2:1500760/1‑149 (MQ=255) aaTGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGc > 1:800643/1‑149 (MQ=255) aaTGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGATG‑GATCACAACAGGTCAGAAGAATCAGGCGCTTGATCAAGCATTTTGCCAGTTGACTGGAAATCAGc > 1:94275/1‑149 (MQ=255) aTGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCa < 2:865267/149‑1 (MQ=255) tGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCAt < 1:879278/149‑1 (MQ=255) gTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATg > 1:1417354/1‑149 (MQ=255) tCAGAATTTTTGCCTTTTTCGCGACCGGCAATGGGCGTGGAGGAACTCGCCGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGc > 1:1326469/1‑149 (MQ=255) tCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGc > 1:1177685/1‑149 (MQ=255) aGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCa > 2:1093045/1‑149 (MQ=255) gAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCAt > 1:441411/1‑149 (MQ=255) tttGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCgg < 1:1102490/149‑1 (MQ=255) ttGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGt < 1:1324330/149‑1 (MQ=255) ttGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAAATCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGAAAGCGTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGt > 1:111419/1‑149 (MQ=255) ccTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAg < 1:1518082/149‑1 (MQ=255) cTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGt > 1:265296/1‑149 (MQ=255) tttCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCa < 1:1436759/149‑1 (MQ=255) cgACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCAc < 2:46777/149‑1 (MQ=255) ccAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCAccgc > 2:516499/1‑149 (MQ=255) aTGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAAt < 1:381430/149‑1 (MQ=255) ggCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCa < 2:1100259/149‑1 (MQ=255) gCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCat > 2:1172227/1‑149 (MQ=255) gTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCatat < 2:412570/149‑1 (MQ=255) gTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCatat < 2:693400/149‑1 (MQ=255) cGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCATATCACGCTAATgg < 1:1172227/149‑1 (MQ=255) gCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCATATCACGCTAATGGc > 1:975356/1‑149 (MQ=255) gCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCATATCACGCTAATGGc < 1:1357329/149‑1 (MQ=255) tGCAGTTAAAGAGGTTCTCGAATCCGGTAG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCATATCACGCTAATGGAGt > 2:191629/1‑149 (MQ=255) gCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCATATCACGCTAATGGCGtt < 1:1054441/149‑1 (MQ=255) aaaGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCATATCACGCTAATGGCGTTGAAAAt < 2:650875/149‑1 (MQ=255) aaGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCATATCACGCTAATGGCGTTGAAAAtt < 2:808163/149‑1 (MQ=255) agagGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCATATCACGCTAATGGCGTTGAAAATTg < 2:136847/149‑1 (MQ=255) agGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGTATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCGACCGCCGGAATGCATATCACGCTAATGGCGTTGAAAATTGGc < 1:1420075/149‑1 (MQ=255) gTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTAGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCATATCACGCTAATGGCGTTGAAAATTGGCaa < 1:89824/149‑1 (MQ=255) ctcGAATCCGGATG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCATATCACGCTAATGGCGTTGAAAATTGGCAAggg < 2:1417354/149‑1 (MQ=255) tcGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGCCGGGTAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCATATCCCGCTAATGGCGTTGAAAATTGGCACGGGc > 2:787517/1‑149 (MQ=255) tcGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCATATCACGCTAATGGCGTTGAAAATTGGCAAGGGc > 1:1119105/1‑149 (MQ=255) gAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATg < 2:1199443/111‑1 (MQ=255) gAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATg > 1:1199443/1‑111 (MQ=255) gAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCATATCACGCTAATGGCGTTGAAAATTGGCAAGGGCGa < 2:46459/149‑1 (MQ=255) aaTCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCTCGGTCAGTTCAGCCACCACCGGAATGCATATCACGCTAATGGCGTTGAAAATTGGCAAGGGCGAt < 2:1519974/149‑1 (MQ=255) aaTCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCATATCACGCTAATGGCGTTGAAAATTGGCAAGGGCGAt < 2:1177685/149‑1 (MQ=255) accGGTTGTGATC‑CAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCatat < 1:825839/112‑1 (MQ=255) accGGTTGTGATC‑CAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCatat > 2:825839/2‑113 (MQ=255) accGGTTGTGATC‑CAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCATATCACGCTAATGGCGTTGAAAATTGGCAAGGGCGATGa > 2:831305/2‑149 (MQ=255) ggTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCATATCACGCTAATGGCGTTGAAAATTGGCAAGGGCGAt > 1:973127/1‑144 (MQ=255) ggTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCATATCACGCTAATGGCGTTGAAAATTGGCAAGGGCGAt < 2:973127/144‑1 (MQ=255) ttG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCATATCACGCTAATGGCGTTGAAAATTGGCAAGGGCGATGAAGTGa < 1:1448183/149‑1 (MQ=255) tG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCATATCACGCTAATGGCGTTGAAAATTGGCAAGGGCGATGAAGTGAt < 2:1243398/149‑1 (MQ=255) gATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCATATCACGCTAATGGCGTTGAAAATTGGCAAGGGCGATGAAGTGATTa < 1:198854/149‑1 (MQ=255) tCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCATATCACGCTAATGGCGTTGAAAATTGGCAAGGGCGATGAAGTGATTACg > 2:787215/1‑149 (MQ=255) | CACAACACTCTTTATAGCAAATATAAGTGGACAGGTATTCAATGGCGGAAGGAAAAGCAATGTCAGAATTTTTGCCTTTTTCGCGACCAGCAATGGGCGTGGAGGAACTCGCTGCAGTTAAAGAGGTTCTCGAATCCGGTTG‑GATCACAACCGGTCCGAAGAATCAGGCGCTTGAGCAAGCTTTTTGCCAGTTGACGGGAAATCAGCATGCCATCGCGGTCAGTTCAGCCACCGCCGGAATGCATATCACGCTAATGGCGTTGAAAATTGGCAAGGGCGATGAAGTGATTACG > NC_000913/2365869‑2366161 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |