| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NC_000913 | 187551 = | 70 (0.780) | 5 (0.060) | 5/262 | NT | 7.2% | coding (1100/2673 nt) | glnD | uridylyltransferase |
| ? | NC_000913 | 187593 = | 61 (0.710) | coding (1058/2673 nt) | glnD | uridylyltransferase | |||||
TTCCGCGTTACACGCCGCGTCAGTGAACTCAACCAGATGCTGCTGCAACTGTTCGATGAAGCCATCCTCGCCCTTCCCGCCGACGAAAAACCACGTCCAATCGACGATGAGTTTCAGCTACGCGGTACGCTAATCGACCTGCGTGATGAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/187702‑187551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaaacTCATCGTCGATTGGACGTGGTTTTTCGTCGGCGGGAAGGGCGAGGATGGCTTCATCGAACAGTTGCAGCAGCATCTGGTTGAGTTCACTGACGCGGCGTGTAACGCG > NC_000913/187593‑187699 TTCCGCGTTACACGCCGCGTCAGTGAACTCAACCAGATGCTGCTGCAACTGTTCGATGAAGCCATCCTCGCCCTTCCCGCCGACGAAAAACCACGTCCAATCGACGATGAGTTTCAGCTACGCGGTACGCTAATCGCCCTGCGTGATGc > 2:624648/1‑148TTCCGCGTTACACGCCGCGTCAGTGAACTCAACCAGATGCTGCTGCAACTGTTCGATGAAGCCATCCTCGCCCTTCCCGCCGACGAAAAACCACGTCCAATCGACGATGAGTTTCAGCTACGCGGTACGCTAATCGACCTGCGTGATGA > 2:692255/1‑149 TCCGCGTTACACGCCGCGTCAGTGAACTCAACCAGATGCTGCTGCAACTGTTCGATGAAGCCATCCTCGCCCTTCCCGCCGACGAAAAACCACGTCCAATCGACGATGAGTTTCAGCTACGCGGTACGCTAATCGACCTGCGTGATGAA > 2:1552170/1‑149 CCGCGTTACACGCCGCGTCAGTGAACTCAACCAGATGCTGCTGCAACTGTTCGATGAAGCCATCCTCGCCCTTCCCGCCGACGAAAAACCACGTCCAATCGACGATGAGTTTCAGCTACGCGGTACGCTAATCGACCTGCGTGATGAAA < 1:703208/149‑1 CCGCGTTACACGCCGCGTCAGTGAACTCAACCAGATGCTGCTGCAACTGTTCGATGAAGCCATCCTCGCCCTTCCCGCCGACGAAAAACCACGTCCAATCGACGATGAGTTTCAGCTACGCGGTACGCTAATCGACCTGCGTGATGAAA < 2:1214436/149‑1 CCGCGTTACACGCCGCGTCAGTGAACTCAACCAGATGCTGCTGCAACTGTTCGATGAAGCCATCCTCGCCCTTCCCGCCGACGAAAAACCACGTCCAATCGACGATGAGTTTCAGCTACGCGGTACGCTAATCGACCTGCGTGATGAAA < 2:1220894/149‑1 CCGCGTTACACGCCGCGTCAGTGAACTCAACCAGATGCTGCTGCAACTGTTCGATGAAGCCATCCTCGCCCTTCCCGCCGACGAAAAACCACGTCCAATCGACGATGAGTTTCAGCTACGCGGTACGCTAATCGACCTGCGTGATGAAA > 2:802259/1‑149 CCGCGTTACACGCCGCGTCAGTGAACTCAACCAGATGCTGCTGCAACTGTTCGATGAAGCCATCCTCGCCCTTCCCGCCGACGAAAAACCACGTCCAATCGACGATGAGGTTCAGCTACGCGGTACGCTAATCGACCTGCGTGATGAAA < 1:1227104/149‑1 GATGAGTTTCAGCTACGCGGTACGCTAATCGACCTGCGTGATGAAACTCATCGTCGATTGGACGTGGTTTTTCGTCGGCGGGAAGGGCGAGGATGGCTTCATCGAACAGTTGCAGCAGCATCTGGTTGAGTTCACTGACGCGGCGTGTA > 1:1125037/1‑149 ATGAGTTTCAGCTACGCGGTACGCTAATCGACCTGCGTGATGAAACTCATCGTCGATTGGACGTGGTTTTTCGTCGGCGGGAAGGGCGAGGATGGCTTCATCGAACAGTTGCAGCAGCATCTGGTTGAGTTCACTGACGCGGCGTGTAA > 1:1041311/1‑149 GTTTCAGCTACGCGGTACGCTAATCGACCTGCGTGATGAAACTCATCGTCGATTGGACGTGGTTTTTCGTCGGCGGGAAGGGCGAGGATGGCTTCATCGAACAGTTGCAGCAGCCTCTGGTTGAGTTCACTGACGCGGCGTGTAACGCG > 1:141312/1‑149 AGCTACGCGGTACGCTAATCGACCTGCGTGATGAAACTCATCGTCGATTGGACGTGGTTTTTCGTCGGCGGGAA < 1:111966/74‑1 AGCTACGCGGTACGCTAATCGACCTGCGTGATGAAACTCATCGTCGATTGGACGTGGTTTTTCGTCGGCGGGAA > 2:111966/1‑74 TTCCGCGTTACACGCCGCGTCAGTGAACTCAACCAGATGCTGCTGCAACTGTTCGATGAAGCCATCCTCGCCCTTCCCGCCGACGAAAAACCACGTCCAATCGACGATGAGTTTCAGCTACGCGGTACGCTAATCGACCTGCGTGATGAAAC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑ < NC_000913/187702‑187551‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tgaaacTCATCGTCGATTGGACGTGGTTTTTCGTCGGCGGGAAGGGCGAGGATGGCTTCATCGAACAGTTGCAGCAGCATCTGGTTGAGTTCACTGACGCGGCGTGTAACGCG > NC_000913/187593‑187699 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |