New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_000913	= 2376055	57 (0.630)	5 (0.060)	4/262	NT	7.9%	coding (765/858 nt)	menB	dihydroxynaphthoic acid synthetase
	?	NC_000913	= 2376144	62 (0.720)					coding (676/858 nt)	menB	dihydroxynaphthoic acid synthetase

AACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGCATTACGGATTCCGTTTGAATTTGCTGAAGTCAGGCTGACGTTTCTGGTTGAAGGCGTTGCGACCTTCCTGACCTTCTTCCGTCATGTAGAACAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2375909‑2376055 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacagcCCGATGGCGCTGCGCTGCCTGAAAGCTGCACTGAACGCCGACTGTGACGGGCAGGCGGGGCTGCAGGAGCTGGCGGGCAACGCCACCATGCTGTTCTACATGACGGAAGAAGGTCAGGAAGGTCGCAACGCCTTCAACCAGAAACGT  <  NC_000913/2376144‑2375998                                                                                                                                                                                                                                                                                                        AACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGCATTACGGATTCCGTTTGAATTTGCTGAAGTCAGGCTGACGTTTCTGGTTGAAGGCGTTGCGACCTTCCTGACCTTCTTCCCTAATGTAGAACAGCCC                                                                                                                                                   >  2:1319399/1‑149                                                                                               TCTGGTTGAAGGCGTTGCGACCTTCCTGACCTTCTTCCGTCATGTAGAACAGCCCGATGGCGCTGCGCTGCCTGAAAGCTGCACTGAACGCCGACTGTGACGGGCAGGCGGGGCTGCAGGAGCTGGCGGGCAACGCCACCATGCTGTTC                                                     <  2:60534/149‑1                                                                                                       AAGGCGTTGCGACCTTCCTGACCTTCTTCCGTCATGTAGAACAGCCCGATGGCGCTGCGCTGCCTGAAAGCTGCACTGAACGCCGACTGTGACGGGCAGGCGGGGCTGCAGGAGCTGGCGGGCAACGCCACCATGCTGTTC                                                     <  1:968372/141‑1                                                                                                       AAGGCGTTGCGACCTTCCTGACCTTCTTCCGTCATGTAGAACAGCCCGATGGCGCTGCGCTGCCTGAAAGCTGCACTGAACGCCGACTGTGACGGGCAGGCGGGGCTGCAGGAGCTGGCGGGCAACGCCACCATGCTGTTC                                                     >  2:968372/1‑141                                                                                                           CGTTGCGACCTTCCTGACCTTCTTCCGTCATGTAGAACAGCCCGATGGCGCTGCGCTGCCTGAAAGCTGCACTGAACGCCGACTGTGACGGGCAGGCGGGGCTGCAGGAGCTGGCGGGCAACGCCACCATGCTGTTCTACATGACGGAA                                         <  2:841527/149‑1                                                                                                             TTGCGACCTTCCTGACCTTCTTCCGTCATGTAGAACAGCCCGATGGCGCGGCGCTGCCGGAACGCTTCTCTGAACGCCGACTGTGACGGGCAGGCGGGGCTGCAGTAGCTGGCGGGCAACGCCACCATGCTGTTCTACATGACGGAAGA                                       <  1:1319399/149‑1                                                                                                                                                CAGCCCGATGGCGCTGCGCTGCCTGAAAGCTGCACTGAACGCCGACTGTGACGGGCAGGCGGGGCTGCAGGAGCTGGCGGGCAACGCCACCATGCTGTTCTACATGACGGAAGAAGGTCAGGAAGGTCGCAACGCCTTCAACCAGAAAC    <  2:438712/149‑1                                                                                                                                                  GCCCGATGGCGCTGCGCTGCCTGAAAGCTGCACTGAACGCCGACTGTGACGGGCAGGCGGGGCTGCAGGAGCTGGCGGGCAACGCCACCATGCTGTTCTACATGACGGAAGAAGGTCAGGAAGGTCGCAACGCCTTCAACCAGAAACGT  <  2:1594064/149‑1                                                                                                                                                                                                                                                                                                        AACCACCCCCGCGTCCATGGGGATCTGCCAGCGGTATACCTGCGCGCTACGCATTACGGATTCCGTTTGAATTTGCTGAAGTCAGGCTGACGTTTCTGGTTGAAGGCGTTGCGACCTTCCTGACCTTCTTCCGTCATGTAGAACAGC‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  NC_000913/2375909‑2376055 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑aacagcCCGATGGCGCTGCGCTGCCTGAAAGCTGCACTGAACGCCGACTGTGACGGGCAGGCGGGGCTGCAGGAGCTGGCGGGCAACGCCACCATGCTGTTCTACATGACGGAAGAAGGTCAGGAAGGTCGCAACGCCTTCAACCAGAAACGT  <  NC_000913/2376144‑2375998

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.